BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0155.p (196 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0373 [R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, invo... 245 6e-65 NMA1767 [R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, invo... 145 4e-35 NMB1578 [R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, invo... 145 7e-35 AGc3756 [R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, invo... 135 6e-32 CC3503 [R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, invol... 135 7e-32 aq_988 [R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, invol... 132 4e-31 BMEI0593 [R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, inv... 132 7e-31 SMc01471 [R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, inv... 131 9e-31 mlr1532 [R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, invo... 129 4e-30 CC0249 [R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, invol... 116 4e-26 >RSc0373 [R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems Rso Ralstonia solanacearum Length = 200 Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 116/169 (68%), Positives = 139/169 (82%), Gaps = 2/169 (1%) Query: 29 FNNTDVTGL-DYAKDFALTDHTGKPRTLADFKGKVVVMFFGYTQCPDVCPTTMVEMSNVM 87 F N D+TG + F+LTDHTGK RTL DF+GKVVVMFFGYT CPDVCPTT+ E+ VM Sbjct: 31 FQNLDITGAKSFGAGFSLTDHTGKRRTLEDFRGKVVVMFFGYTHCPDVCPTTLAELRGVM 90 Query: 88 KELGPDADKVQVLFVTVDPERDTQEVLSQYVPAFDKRFLGLR-GDQQQTEKVAKEFKVFY 146 LG DAD+VQVLFVTVDP+RDTQ++L++YVPAFD RF+GLR + Q+ +KVAK+FKVFY Sbjct: 91 DGLGKDADRVQVLFVTVDPQRDTQDLLAKYVPAFDPRFIGLRPANDQELQKVAKDFKVFY 150 Query: 147 QKVPGKQPGSYTMDHTAGSYVFDPQGRIRLFVKHGQGPQTLAHDIKLLL 195 KVPG P +YTMDHTAGSY+FDP+G +RLF+KHGQGP + HDIKLLL Sbjct: 151 SKVPGSTPDNYTMDHTAGSYMFDPKGNLRLFIKHGQGPAPIVHDIKLLL 199 >NMA1767 [R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems NmA Neisseria meningitidis Z2491 Length = 217 Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 73/174 (41%), Positives = 110/174 (63%), Gaps = 4/174 (2%) Query: 24 KPELKFNNTDVTGLDYAKDFALTDHTGKPRTLADFKGKVVVMFFGYTQCPDVCPTTMVEM 83 KP+ + TD+ D DF LTD GKP L+D KGKVV++ FG+T CPDVCPT ++ Sbjct: 46 KPQTR--GTDMRKEDIGGDFTLTDGEGKPFNLSDLKGKVVILSFGFTHCPDVCPTELLTY 103 Query: 84 SNVMKELGPDADKVQVLFVTVDPERDTQEVLSQYVPAFDKRFLGLRGDQQQTEKVAK-EF 142 S+ +K+LG A V+V+FV++DPERDT E++ +Y F+ F+GL Q V K ++ Sbjct: 104 SDTLKQLGGQAKDVKVVFVSIDPERDTPEIIGKYAKQFNPDFIGLTATGDQNLPVIKQQY 163 Query: 143 KVFYQKVPGKQPG-SYTMDHTAGSYVFDPQGRIRLFVKHGQGPQTLAHDIKLLL 195 +V KV K +Y +DH++G+Y+ D G + +F +G P+T+A D++ LL Sbjct: 164 RVVSAKVNQKDDSENYLVDHSSGAYLIDKNGEVAIFSPYGSEPETIAADVRTLL 217 >NMB1578 [R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems Nme Neisseria meningitidis MC58 Length = 217 Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 73/174 (41%), Positives = 110/174 (63%), Gaps = 4/174 (2%) Query: 24 KPELKFNNTDVTGLDYAKDFALTDHTGKPRTLADFKGKVVVMFFGYTQCPDVCPTTMVEM 83 KP+ + TD+ D DF LTD GKP L+D KGKVV++ FG+T CPDVCPT ++ Sbjct: 46 KPQTR--GTDMRKEDIGGDFTLTDGEGKPFNLSDLKGKVVILSFGFTHCPDVCPTELLTY 103 Query: 84 SNVMKELGPDADKVQVLFVTVDPERDTQEVLSQYVPAFDKRFLGLRGDQQQTEKVAK-EF 142 S+ +K+LG A V+V+FV++DPERDT E++ +Y F+ F+GL Q V K ++ Sbjct: 104 SDTLKQLGGQAKDVKVVFVSIDPERDTPEIIGKYAKQFNPDFIGLTATGGQNLPVIKQQY 163 Query: 143 KVFYQKVPGKQPG-SYTMDHTAGSYVFDPQGRIRLFVKHGQGPQTLAHDIKLLL 195 +V KV K +Y +DH++G+Y+ D G + +F +G P+T+A D++ LL Sbjct: 164 RVVSAKVNQKDDSENYLVDHSSGAYLIDKNGEVAIFSPYGSEPETIAADVRTLL 217 >AGc3756 [R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 202 Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 66/160 (41%), Positives = 95/160 (59%), Gaps = 3/160 (1%) Query: 39 YAKDFALTDHTGKPRTLADFKGKVVVMFFGYTQCPDVCPTTMVEMSNVMKELGPDADKVQ 98 Y FALT G+P T F+GK +FFG+T CP+VCPTT+ E++ M+++ P DK+Q Sbjct: 38 YGVPFALTAQNGQPITEKAFQGKPTALFFGFTHCPEVCPTTLFELNGWMEKVDPAGDKLQ 97 Query: 99 VLFVTVDPERDTQEVLSQYVPAFDKRFLGLRGDQQQTEKVAKEFKVFYQKVP--GKQP-G 155 FV+VDPERDT E++ QYV KR G+ G + + K ++++ +KVP K P G Sbjct: 98 AYFVSVDPERDTPEIMQQYVSNVSKRITGITGPADKIAETLKGYRIYAKKVPVDEKDPNG 157 Query: 156 SYTMDHTAGSYVFDPQGRIRLFVKHGQGPQTLAHDIKLLL 195 YTMDHTA + D GR + +G+ P ++ LL Sbjct: 158 DYTMDHTASVILLDANGRFAGTIAYGENPDVAEQKLQNLL 197 >CC3503 [R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems Ccr Caulobacter vibrioides Length = 190 Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 68/146 (46%), Positives = 90/146 (61%), Gaps = 2/146 (1%) Query: 43 FALTDHTGKPRTLADFKGKVVVMFFGYTQCPDVCPTTMVEMSNVMKELGPDADKVQVLFV 102 F LTD GKP T GK +FFG+T CP+VCPTT+ EM+ +K LG DADK+ V+ + Sbjct: 38 FQLTDMNGKPVTEKSLLGKPTAVFFGFTYCPEVCPTTLTEMTAWLKALGKDADKLNVVLI 97 Query: 103 TVDPERDTQEVLSQYVPAFDKRFLGLRGDQQQTEKVAKEFKVFYQKVPGKQPGSYTMDHT 162 TVDPERDT L +Y+ FD R G G K A+ ++V+YQKVP G YT+DH+ Sbjct: 98 TVDPERDTPAQLKEYLSNFDPRIQGFTGTPDAIAKTARAYRVYYQKVP-LDGGGYTIDHS 156 Query: 163 AGSYVFDPQGRIRLFVKHGQGPQTLA 188 + Y+FD +GR + + Q PQ A Sbjct: 157 SAIYLFDAKGRFVSPIAY-QAPQDRA 181 >aq_988 [R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems Aae Aquifex aeolicus Length = 197 Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 72/163 (44%), Positives = 104/163 (63%), Gaps = 7/163 (4%) Query: 40 AKDFAL-TDHTGKPR--TLADF--KGKVVVMFFGYTQCPDVCPTTMVEMSNVMKELGPDA 94 A +F L T+ GK + L D + +V++FFG+T CPDVCP M + N MK+L D Sbjct: 34 AYNFCLKTEENGKVKEVCLKDILKEKDIVLVFFGFTHCPDVCPAAMEVLKNTMKKLDEDE 93 Query: 95 DK-VQVLFVTVDPERDTQEVLSQYVPAFDKRFLGLRGDQQQTEKVAKEFKVFYQKVPGKQ 153 K VQV+F++VDPERDT +++SQY FD+ FLGL G ++ ++VAK +KVFY+KVP K Sbjct: 94 RKRVQVVFISVDPERDTPKLVSQYAKYFDESFLGLTGTPEEIKEVAKAYKVFYEKVPQKG 153 Query: 154 PGSYTMDHTAGSYVFDPQGRIRL-FVKHGQGPQTLAHDIKLLL 195 Y ++H+A Y+ G+I+L + Q P +A D+K LL Sbjct: 154 SNDYLVNHSALIYLITKDGKIKLIYSASKQKPNLIAEDVKKLL 196 >BMEI0593 [R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems Bme Brucella melitensis Length = 196 Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 63/156 (40%), Positives = 92/156 (58%), Gaps = 1/156 (0%) Query: 39 YAKDFALTDHTGKPRTLADFKGKVVVMFFGYTQCPDVCPTTMVEMSNVMKELGPDADKVQ 98 + F L GKP + D + V+FFG+T CPDVCPTT+ E+ +K+LGP+A ++ Sbjct: 35 FGGSFNLVTMDGKPFSEKDLRATPAVVFFGFTHCPDVCPTTLYELDGWLKQLGPEAGDIK 94 Query: 99 VLFVTVDPERDTQEVLSQYVPAFDKRFLGLRGDQQQTEKVAKEFKVFYQKVPGKQPGSYT 158 FVTVDPERDTQ+V++ YV R +G+ G ++ K + V+ +KVP + G YT Sbjct: 95 AYFVTVDPERDTQDVMNTYVSNVTDRIMGITGTPDNIAEMVKSYHVYARKVP-IEDGDYT 153 Query: 159 MDHTAGSYVFDPQGRIRLFVKHGQGPQTLAHDIKLL 194 MDHTA ++ D GR R + + + P T +K L Sbjct: 154 MDHTASIFLLDKGGRFRGTIAYQENPDTALEKLKNL 189 >SMc01471 [R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems Sme Sinorhizobium meliloti Length = 199 Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 62/155 (40%), Positives = 93/155 (60%), Gaps = 3/155 (1%) Query: 43 FALTDHTGKPRTLADFKGKVVVMFFGYTQCPDVCPTTMVEMSNVMKELGPDADKVQVLFV 102 F L G+ T F GK +FFG+T CP+VCPTT+ E++ + ++ P+ +K+Q F+ Sbjct: 42 FTLVAQNGEQITEKAFTGKPTALFFGFTHCPEVCPTTLFELNGWLDKVDPEGNKLQAYFI 101 Query: 103 TVDPERDTQEVLSQYVPAFDKRFLGLRGDQQQTEKVAKEFKVFYQKVP---GKQPGSYTM 159 TVDPERDT EVL QYV KR G+ G + ++ K ++V+Y+KVP K G YTM Sbjct: 102 TVDPERDTPEVLGQYVSNVSKRITGISGPPDKVLEMVKGYRVYYKKVPTDEAKPDGDYTM 161 Query: 160 DHTAGSYVFDPQGRIRLFVKHGQGPQTLAHDIKLL 194 DHTA ++ D G+ + +G+ P+T ++ L Sbjct: 162 DHTASVFLLDANGQFSGTIAYGENPETAVKKLENL 196 >mlr1532 [R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems Mlo Mesorhizobium loti Length = 245 Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 68/188 (36%), Positives = 99/188 (52%), Gaps = 2/188 (1%) Query: 9 LLAGCATLLAACGPSKPELKFNNTDVTGLDYAKDFALTDHTGKPRTLADFKGKVVVMFFG 68 +L G L+AA G + G + F L D G P T A F+G+ V+FFG Sbjct: 58 ILVGILVLMAA-GIGWLTFDWYRGHYGGEPFGAPFTLVDQKGAPITEAAFRGQPSVVFFG 116 Query: 69 YTQCPDVCPTTMVEMSNVMKELGPDADKVQVLFVTVDPERDTQEVLSQYVPAFDKRFLGL 128 +T CP+VCPTT+ E+S +K LG D + FV+VDPERDT V++ YV F R G+ Sbjct: 117 FTHCPEVCPTTLFELSGWLKTLGDDGKTLHAYFVSVDPERDTPAVMNAYVSNFSDRITGI 176 Query: 129 RGDQQQTEKVAKEFKVFYQKVPGKQPGSYTMDHTAGSYVFDPQGRIRLFVKHGQGPQTLA 188 GD + +AK F ++++KV G YTMDHTA + + +G + +G+ Sbjct: 177 TGDPDKVHAMAKSFGIYWKKVD-TGDGDYTMDHTASVLLLNSKGDFAGTIAYGESASAAV 235 Query: 189 HDIKLLLS 196 +K L + Sbjct: 236 EKLKRLAA 243 >CC0249 [R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems Ccr Caulobacter vibrioides Length = 196 Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 66/194 (34%), Positives = 98/194 (50%), Gaps = 6/194 (3%) Query: 1 MKRFFSALLLAGCATLLAACGPSKPELKFNNTDVTGLDYAKDFALTDHTGKPRTLADFKG 60 M R L+LA L A G + F + + F L D G P + KG Sbjct: 1 MPRHRLVLILACVVGLAVAVGLAWNVGVFRSE--PAVTVGGPFELVDQNGAPTSEKALKG 58 Query: 61 KVVVMFFGYTQCPDVCPTTMVEMSNVMKELGPDADKVQVLFVTVDPERDTQEVLSQYV-- 118 K +FFG+T CPDVCP T+ ++ +LGP A Q++F+++DP RDT + + Y+ Sbjct: 59 KWSAVFFGFTYCPDVCPGTLQGLAAATDQLGPKAKDFQIVFISIDPARDTVKQMKAYLSA 118 Query: 119 PAFDKRFLGLRGDQQQTEKVAKEFKVFYQKVPGKQPGSYTMDHTAGSYVFDPQGRIRLFV 178 P K +GL G Q Q + AK ++V++ KV YTMDH+ Y+ DP+GR + + Sbjct: 119 PYVPKATIGLTGTQAQVDAAAKAYRVYHAKV--GDGVDYTMDHSTAIYLMDPKGRFKTVI 176 Query: 179 KHGQGPQTLAHDIK 192 + P +A IK Sbjct: 177 PYNLPPDEIARRIK 190