BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0127.p         (173 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp0613 [K] COG1309 Transcriptional regulator Rso Ralstonia sola...   120   1e-27

>RSp0613 [K] COG1309 Transcriptional regulator Rso Ralstonia solanacearum
          Length = 215

 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 6/166 (3%)

Query: 1   MNEVALACGLSKASLYHYFADKHQLLMHICEDHIDRLCALVDEVAQQD-----LAPEPRL 55
           MN++A ACG SK+ LYHY+  K  +L  + + +  RL  LV E A++D     L+    L
Sbjct: 45  MNQIAAACGGSKSRLYHYYEGKEAILFDLLDRYTRRLADLV-ERAERDALHARLSARATL 103

Query: 56  RLLVQRFVEEYRDAQNEHRVLTEDVRFLEPGDQKRILNGERKVVKAVADAMSAVRPELDR 115
            LL++ F+ EY  ++  H  L  DV++L P  +  IL  ER+VV AV   ++A  P    
Sbjct: 104 HLLIRTFLAEYATSRTRHVALLNDVKYLSPEQRDIILAREREVVAAVGRQLAAAYPGKVD 163

Query: 116 SRMAKPLAMLLFGMINWMFMWLKPDGELTHERMAVVVSDLLFGGIG 161
                P+ M++FGM+NW F WLKPDG L++E  A +V ++L  G+G
Sbjct: 164 DANRTPVTMMVFGMMNWTFTWLKPDGPLSYEGYAEMVIEMLENGLG 209