BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0106.p (267 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2962 [Q] COG1127 ABC-type transport system involved in resist... 364 e-101 NMB1966 [Q] COG1127 ABC-type transport system involved in resist... 315 5e-86 NMA0485 [Q] COG1127 ABC-type transport system involved in resist... 315 6e-86 PA4456 [Q] COG1127 ABC-type transport system involved in resista... 310 3e-84 VC2520 [Q] COG1127 ABC-type transport system involved in resista... 306 2e-83 PM0174 [Q] COG1127 ABC-type transport system involved in resista... 295 7e-80 HI1087 [Q] COG1127 ABC-type transport system involved in resista... 293 2e-79 STM3313 [Q] COG1127 ABC-type transport system involved in resist... 290 3e-78 YPO3575 [Q] COG1127 ABC-type transport system involved in resist... 287 2e-77 yrbF [Q] COG1127 ABC-type transport system involved in resistanc... 286 4e-77 >RSc2962 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component Rso Ralstonia solanacearum Length = 279 Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust. Identities = 182/264 (68%), Positives = 214/264 (81%), Gaps = 2/264 (0%) Query: 4 IVEIRDLHFRY--GDRPILSGLHMDFPRGKVVAVMGGSGSGKTTILRLIGGQLRPQQGKV 61 +VE+ + F Y G R ILSGL M P+G VVAVMGGSG GKTT+LRLIGGQ+ G V Sbjct: 9 VVELDQVDFAYQPGARRILSGLCMRVPKGSVVAVMGGSGCGKTTVLRLIGGQVAAASGAV 68 Query: 62 EVDGENVPDLATKQLFLLRRKMGMLFQNGALFTDMTVFDNVAFPLREHTDLDETLIRDLV 121 V G ++ + L+ RR+MGMLFQ GALF+DM+VFDNVAFPLREHT+L + LIRDLV Sbjct: 69 RVHGADIGAMDKPALYAARRQMGMLFQFGALFSDMSVFDNVAFPLREHTELPDLLIRDLV 128 Query: 122 LMKLNAVGLRNAASLKPAEISGGMARRVALARAIALDPALIMYDEPFAGLDPISMGVTAN 181 LMKLNAVGLR A L P++ISGGMARRVALARAIALDP+LI+YDEPFAGLDPIS+G+TA+ Sbjct: 129 LMKLNAVGLRGARDLMPSQISGGMARRVALARAIALDPSLILYDEPFAGLDPISLGLTAS 188 Query: 182 LIRRLNDALGSTSILVSHDVNESFAIADHVYFLSAGKIVAQGRPEELRSSTDPYVRQFVH 241 LIR LNDALG+TSI+VSHDV E+F IAD+VYF++ G I A+G P EL +STDP+VRQFVH Sbjct: 189 LIRSLNDALGATSIIVSHDVQETFQIADYVYFVANGGIAAEGTPAELSASTDPFVRQFVH 248 Query: 242 AEADGPVPFHYPGKSLAEDLGLGG 265 E DGPVPFHYPG LAED G+GG Sbjct: 249 GEPDGPVPFHYPGVPLAEDFGVGG 272 >NMB1966 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component Nme Neisseria meningitidis MC58 Length = 266 Score = 315 bits (808), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 150/258 (58%), Positives = 200/258 (77%), Gaps = 1/258 (0%) Query: 5 VEIRDLHFRYGDRPILSGLHMDFPRGKVVAVMGGSGSGKTTILRLIGGQLRPQQGKVEVD 64 +E++D+ F YGDRPIL ++ P+G AVMGGSGSGKTT++RLI GQ+RPQ G+V ++ Sbjct: 7 IEMKDVAFAYGDRPILKNINFSIPQGNFAAVMGGSGSGKTTLMRLITGQIRPQSGQVLIE 66 Query: 65 GENVPDLATKQLFLLRRKMGMLFQNGALFTDMTVFDNVAFPLREHTDLDETLIRDLVLMK 124 G ++ + +L+ RR+MG+LFQ+GALFTD++VFDN+AFP+RE T L E +IRDLVL+K Sbjct: 67 GRDLAGFSADELYEHRRRMGVLFQHGALFTDLSVFDNIAFPMRELTRLPEAVIRDLVLLK 126 Query: 125 LNAVGLRNAASLKPAEISGGMARRVALARAIALDPALIMYDEPFAGLDPISMGVTANLIR 184 LNAVGLR +L P+E+SGGM+RRVALAR IALDP +++YDEPF GLDPIS+GV A+LI Sbjct: 127 LNAVGLRGVENLMPSELSGGMSRRVALARTIALDPEIMLYDEPFTGLDPISLGVIAHLIS 186 Query: 185 RLNDALGSTSILVSHDVNESFAIADHVYFLSAGKIVAQGRPEELRSSTDPYVRQFVHAEA 244 R+N AL STSI+V+HD+ +S I D V FL+ G+I+ G P+E+R P+VRQFV A Sbjct: 187 RVNKALRSTSIMVTHDIEKSLEIVDQVIFLAHGEIMFSGSPQEMRELDSPWVRQFVGGLA 246 Query: 245 DGPVPFHYPGK-SLAEDL 261 DGPV + YP + SL +DL Sbjct: 247 DGPVAYRYPAQTSLQQDL 264 >NMA0485 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component NmA Neisseria meningitidis Z2491 Length = 286 Score = 315 bits (807), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 150/258 (58%), Positives = 201/258 (77%), Gaps = 1/258 (0%) Query: 5 VEIRDLHFRYGDRPILSGLHMDFPRGKVVAVMGGSGSGKTTILRLIGGQLRPQQGKVEVD 64 +E++D+ F YGDRPIL+ ++ P+G AVMGGSGSGKTT++RLI GQ+RPQ GKV ++ Sbjct: 27 IEMKDVAFAYGDRPILNDINFSIPQGNFAAVMGGSGSGKTTLMRLITGQIRPQSGKVLIE 86 Query: 65 GENVPDLATKQLFLLRRKMGMLFQNGALFTDMTVFDNVAFPLREHTDLDETLIRDLVLMK 124 G ++ + +L+ RR+MG+LFQ+GALFTD++VFDN+AFP+RE T L E +IRDLVL+K Sbjct: 87 GRDLAGFSADELYEHRRRMGVLFQHGALFTDLSVFDNIAFPMRELTRLPEAVIRDLVLLK 146 Query: 125 LNAVGLRNAASLKPAEISGGMARRVALARAIALDPALIMYDEPFAGLDPISMGVTANLIR 184 LNAVGLR +L P+E+SGGM+RRVALAR IALDP +++YDEPF GLDPIS+GV A+LI Sbjct: 147 LNAVGLRGVENLMPSELSGGMSRRVALARTIALDPEIMLYDEPFTGLDPISLGVIAHLIS 206 Query: 185 RLNDALGSTSILVSHDVNESFAIADHVYFLSAGKIVAQGRPEELRSSTDPYVRQFVHAEA 244 R+N AL STS++V+HD+ +S I D V FL+ G+I+ G P+E+R P+VRQFV A Sbjct: 207 RVNKALRSTSVMVTHDIEKSLEIVDQVIFLAHGEIMFSGSPQEMRELDSPWVRQFVGGLA 266 Query: 245 DGPVPFHYPGK-SLAEDL 261 DGPV + YP + SL +DL Sbjct: 267 DGPVAYRYPAQTSLQQDL 284 >PA4456 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component Pae Pseudomonas aeruginosa Length = 269 Score = 310 bits (793), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 149/257 (57%), Positives = 191/257 (74%) Query: 5 VEIRDLHFRYGDRPILSGLHMDFPRGKVVAVMGGSGSGKTTILRLIGGQLRPQQGKVEVD 64 VE++ L F+ G R I + + PRGKV +MG SG GKTT+LRLI QLRP +G+V V+ Sbjct: 9 VELKGLTFKRGSRAIFDNIDVRIPRGKVTGIMGPSGCGKTTLLRLIASQLRPSKGEVWVN 68 Query: 65 GENVPDLATKQLFLLRRKMGMLFQNGALFTDMTVFDNVAFPLREHTDLDETLIRDLVLMK 124 G+N+P L+ LF +R++ G+LFQ+GALFTD+ VF+NVAFPLR HT L E +IRD+VLMK Sbjct: 69 GQNLPQLSRGDLFDMRKQFGVLFQSGALFTDLDVFENVAFPLRVHTQLPEEMIRDIVLMK 128 Query: 125 LNAVGLRNAASLKPAEISGGMARRVALARAIALDPALIMYDEPFAGLDPISMGVTANLIR 184 L AVGLR A L P E+SGGM RRVALARAIALDP +++YDEPF G DPI+MGV LIR Sbjct: 129 LQAVGLRGAVELMPDELSGGMKRRVALARAIALDPQILLYDEPFVGQDPIAMGVLVRLIR 188 Query: 185 RLNDALGSTSILVSHDVNESFAIADHVYFLSAGKIVAQGRPEELRSSTDPYVRQFVHAEA 244 LNDALG TSI+VSHD+ E+ +IAD++Y + G+++ G P+ L+ + DP +RQFV Sbjct: 189 LLNDALGITSIVVSHDLAETASIADYIYIVGDGRVLGHGTPDVLKETDDPRIRQFVKGIP 248 Query: 245 DGPVPFHYPGKSLAEDL 261 DGPVPFHYP + DL Sbjct: 249 DGPVPFHYPARDYRADL 265 >VC2520 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component Vch Vibrio cholerae Length = 267 Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 157/259 (60%), Positives = 201/259 (77%) Query: 3 NIVEIRDLHFRYGDRPILSGLHMDFPRGKVVAVMGGSGSGKTTILRLIGGQLRPQQGKVE 62 ++V I++L F R I + + P+GKV A+MG SG GKTT+LRLIGGQL P+QG++ Sbjct: 5 DLVTIKNLRFSRSQRVIFDDIDLHVPKGKVTAIMGPSGIGKTTLLRLIGGQLLPEQGEIW 64 Query: 63 VDGENVPDLATKQLFLLRRKMGMLFQNGALFTDMTVFDNVAFPLREHTDLDETLIRDLVL 122 DGEN+P L+ ++L+ R+KM MLFQ+GALFTD+ VFDNVA+PLREHT+LDE +I+ LVL Sbjct: 65 FDGENIPTLSRRKLYRARKKMSMLFQSGALFTDLNVFDNVAYPLREHTELDEAMIKTLVL 124 Query: 123 MKLNAVGLRNAASLKPAEISGGMARRVALARAIALDPALIMYDEPFAGLDPISMGVTANL 182 +KL AVGLR AA L P+E+SGGMARR ALARAIALDP LIMYDEPF G DPI+MGV L Sbjct: 125 LKLEAVGLRGAAYLMPSELSGGMARRAALARAIALDPELIMYDEPFVGQDPITMGVLVEL 184 Query: 183 IRRLNDALGSTSILVSHDVNESFAIADHVYFLSAGKIVAQGRPEELRSSTDPYVRQFVHA 242 IR LN ALG TS++VSHDV E +IAD VY L+ GK++AQG P+ LR + DP V+QF+ Sbjct: 185 IRNLNRALGVTSVVVSHDVPEVMSIADWVYLLADGKVIAQGSPQALRDNPDPRVQQFLCG 244 Query: 243 EADGPVPFHYPGKSLAEDL 261 +ADGPVPF +P + + ++L Sbjct: 245 DADGPVPFRFPAQPIEQEL 263 >PM0174 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component Pmu Pasteurella multocida Length = 264 Score = 295 bits (755), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 149/258 (57%), Positives = 201/258 (77%) Query: 4 IVEIRDLHFRYGDRPILSGLHMDFPRGKVVAVMGGSGSGKTTILRLIGGQLRPQQGKVEV 63 ++E++ L F+ G+R I L++ +GK+ A+MG SG GKTT+L+LIGGQL+P++G++ Sbjct: 5 LIEVKHLTFKRGERTIYDNLNLRVEKGKITAIMGPSGIGKTTLLKLIGGQLQPEKGEIWF 64 Query: 64 DGENVPDLATKQLFLLRRKMGMLFQNGALFTDMTVFDNVAFPLREHTDLDETLIRDLVLM 123 DG+++ L+ +L+ +R+KMGMLFQ+GALFTD++ FDNVAFP+REHT L E+LIR +VLM Sbjct: 65 DGKDICQLSNAELYQVRQKMGMLFQSGALFTDISTFDNVAFPIREHTRLPESLIRKIVLM 124 Query: 124 KLNAVGLRNAASLKPAEISGGMARRVALARAIALDPALIMYDEPFAGLDPISMGVTANLI 183 KL +VGLR AA L P+E+SGGMARR ALARAIALDP LIM+DEPFAG DPISMGV +LI Sbjct: 125 KLESVGLRGAAELMPSELSGGMARRAALARAIALDPELIMFDEPFAGQDPISMGVILSLI 184 Query: 184 RRLNDALGSTSILVSHDVNESFAIADHVYFLSAGKIVAQGRPEELRSSTDPYVRQFVHAE 243 +RLN+AL TSI+VSHDV E +IAD+ Y ++ +++A+G +L S DP VRQF+ E Sbjct: 185 KRLNEALNLTSIVVSHDVQEVLSIADYAYIIADKRVIAEGTSTQLLQSQDPQVRQFLDGE 244 Query: 244 ADGPVPFHYPGKSLAEDL 261 ADGPV FH+P + E L Sbjct: 245 ADGPVRFHFPAEDYVEAL 262 >HI1087 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component Hin Haemophilus influenzae Length = 264 Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 149/259 (57%), Positives = 201/259 (77%) Query: 3 NIVEIRDLHFRYGDRPILSGLHMDFPRGKVVAVMGGSGSGKTTILRLIGGQLRPQQGKVE 62 N++E+++L F+ GDR I L++ +GK+ A+MG SG GKTT+L+LIGGQL P+QG++ Sbjct: 4 NLIEVKNLTFKRGDRVIYDNLNLQVKKGKITAIMGPSGIGKTTLLKLIGGQLMPEQGEIL 63 Query: 63 VDGENVPDLATKQLFLLRRKMGMLFQNGALFTDMTVFDNVAFPLREHTDLDETLIRDLVL 122 DG+++ L+ ++L+ +R++MGMLFQ+GALFTD++ FDNVAFP+REHT L E LIR +VL Sbjct: 64 FDGQDICRLSNRELYEVRKRMGMLFQSGALFTDISTFDNVAFPIREHTHLPENLIRQIVL 123 Query: 123 MKLNAVGLRNAASLKPAEISGGMARRVALARAIALDPALIMYDEPFAGLDPISMGVTANL 182 MKL AVGLR AA+L P+E+SGGMARR ALARAIALDP LIM+DEPF G DPISMGV +L Sbjct: 124 MKLEAVGLRGAAALMPSELSGGMARRAALARAIALDPDLIMFDEPFTGQDPISMGVILSL 183 Query: 183 IRRLNDALGSTSILVSHDVNESFAIADHVYFLSAGKIVAQGRPEELRSSTDPYVRQFVHA 242 I+RLN+AL TSI+VSHDV E +IAD+ Y ++ K++A+G E+L S D V QF+ Sbjct: 184 IKRLNEALNLTSIVVSHDVEEVLSIADYAYIIADQKVIAEGTSEQLLQSQDLRVVQFLKG 243 Query: 243 EADGPVPFHYPGKSLAEDL 261 E+DGPV F YP + ++L Sbjct: 244 ESDGPVRFKYPAQDYVKEL 262 >STM3313 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component Sty Salmonella typhimurium LT2 Length = 270 Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 150/259 (57%), Positives = 193/259 (74%) Query: 3 NIVEIRDLHFRYGDRPILSGLHMDFPRGKVVAVMGGSGSGKTTILRLIGGQLRPQQGKVE 62 N+V++RD+ F G+R I + + PRGK+ A+MG SG GKTT+LRLIGGQ+ P +G++ Sbjct: 7 NLVDMRDVSFSRGERCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIPPDKGEIL 66 Query: 63 VDGENVPDLATKQLFLLRRKMGMLFQNGALFTDMTVFDNVAFPLREHTDLDETLIRDLVL 122 DGENVP ++ +L+ +R++M MLFQ+GALFTDM VFDNVA+PLREHT+L L++ +V+ Sbjct: 67 FDGENVPAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTNLPAPLLKSVVM 126 Query: 123 MKLNAVGLRNAASLKPAEISGGMARRVALARAIALDPALIMYDEPFAGLDPISMGVTANL 182 MKL AVGLR AA L P+E+SGGMARR ALARAIAL+P LIM+DEPF G DPI+MGV L Sbjct: 127 MKLEAVGLRGAAKLMPSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKL 186 Query: 183 IRRLNDALGSTSILVSHDVNESFAIADHVYFLSAGKIVAQGRPEELRSSTDPYVRQFVHA 242 I LN ALG T ++VSHDV E +IADH + ++ KIVA G + L+ +TDP VRQF+ Sbjct: 187 ISELNSALGVTCVVVSHDVPEVLSIADHAWIMADKKIVAHGSAQALQENTDPRVRQFLDG 246 Query: 243 EADGPVPFHYPGKSLAEDL 261 ADGPVPF YP DL Sbjct: 247 IADGPVPFRYPAGDYHLDL 265 >YPO3575 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component Ype Yersinia pestis Length = 272 Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 150/259 (57%), Positives = 196/259 (75%) Query: 3 NIVEIRDLHFRYGDRPILSGLHMDFPRGKVVAVMGGSGSGKTTILRLIGGQLRPQQGKVE 62 N++EIR + F G+R I + ++M PRGKV A+MG SG GKTT+LRLIGGQL P G++ Sbjct: 10 NLIEIRGMSFTRGERLIFADINMTVPRGKVTAIMGPSGIGKTTLLRLIGGQLAPDTGEIW 69 Query: 63 VDGENVPDLATKQLFLLRRKMGMLFQNGALFTDMTVFDNVAFPLREHTDLDETLIRDLVL 122 DG+N+P L+ ++L+ +R+KM MLFQ+GALFTD+TVF+NVAFPLREH+ L E L+ V+ Sbjct: 70 FDGDNIPALSRQRLYDVRKKMSMLFQSGALFTDLTVFENVAFPLREHSRLPEELLHSTVM 129 Query: 123 MKLNAVGLRNAASLKPAEISGGMARRVALARAIALDPALIMYDEPFAGLDPISMGVTANL 182 MKL AVGLR AA+L PAE+SGGMARR ALARAIALDP LIM+DEPF G DPI+MGV L Sbjct: 130 MKLEAVGLRGAANLMPAELSGGMARRAALARAIALDPELIMFDEPFVGQDPITMGVLVKL 189 Query: 183 IRRLNDALGSTSILVSHDVNESFAIADHVYFLSAGKIVAQGRPEELRSSTDPYVRQFVHA 242 I LN ALG T ++VSHDV E +IAD+ Y ++ ++A+G PE+L++++D VRQF+ Sbjct: 190 IDELNHALGVTCVVVSHDVPEVLSIADYAYIVADQHVIAEGTPEQLQTNSDMRVRQFLDG 249 Query: 243 EADGPVPFHYPGKSLAEDL 261 ADGPVPF +P +L Sbjct: 250 IADGPVPFRFPAGDYKTEL 268 >yrbF [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component Eco Escherichia coli K12 Length = 269 Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 149/259 (57%), Positives = 189/259 (72%) Query: 3 NIVEIRDLHFRYGDRPILSGLHMDFPRGKVVAVMGGSGSGKTTILRLIGGQLRPQQGKVE 62 N+V++RD+ F G+R I + + PRGK+ A+MG SG GKTT+LRLIGGQ+ P G++ Sbjct: 7 NLVDMRDVSFTRGNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEIL 66 Query: 63 VDGENVPDLATKQLFLLRRKMGMLFQNGALFTDMTVFDNVAFPLREHTDLDETLIRDLVL 122 DGEN+P ++ +L+ +R++M MLFQ+GALFTDM VFDNVA+PLREHT L L+ V+ Sbjct: 67 FDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVM 126 Query: 123 MKLNAVGLRNAASLKPAEISGGMARRVALARAIALDPALIMYDEPFAGLDPISMGVTANL 182 MKL AVGLR AA L P+E+SGGMARR ALARAIAL+P LIM+DEPF G DPI+MGV L Sbjct: 127 MKLEAVGLRGAAKLMPSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKL 186 Query: 183 IRRLNDALGSTSILVSHDVNESFAIADHVYFLSAGKIVAQGRPEELRSSTDPYVRQFVHA 242 I LN ALG T ++VSHDV E +IADH + L+ KIVA G + L+++ DP VRQF+ Sbjct: 187 ISELNSALGVTCVVVSHDVPEVLSIADHAWILADKKIVAHGSAQALQANPDPRVRQFLDG 246 Query: 243 EADGPVPFHYPGKSLAEDL 261 ADGPVPF YP DL Sbjct: 247 IADGPVPFRYPAGDYHADL 265