BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0105.p (280 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2961 [Q] COG0767 ABC-type transport system involved in resist... 335 6e-92 PM0175 [Q] COG0767 ABC-type transport system involved in resista... 244 2e-64 VC2519 [Q] COG0767 ABC-type transport system involved in resista... 241 2e-63 YPO3574 [Q] COG0767 ABC-type transport system involved in resist... 239 6e-63 yrbE [Q] COG0767 ABC-type transport system involved in resistanc... 237 3e-62 ZyrbE [Q] COG0767 ABC-type transport system involved in resistan... 237 3e-62 ECs4073 [Q] COG0767 ABC-type transport system involved in resist... 237 3e-62 STM3312 [Q] COG0767 ABC-type transport system involved in resist... 235 8e-62 HI1086 [Q] COG0767 ABC-type transport system involved in resista... 233 3e-61 NMB1965 [Q] COG0767 ABC-type transport system involved in resist... 231 2e-60 >RSc2961 [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component Rso Ralstonia solanacearum Length = 255 Score = 335 bits (860), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 170/233 (72%), Positives = 197/233 (84%) Query: 5 LVSGLGRSLREFVVGVGFAGRMFASMLGSSLGLLRRPRLITDQIHFIGNYSLVIIAVSGL 64 ++S +G +R + +G+A RM +++G+ +LRRPRL+ +Q+ FIGN S +IIAVSGL Sbjct: 1 MISSIGFLVRILISRLGYATRMLLALIGAGRDVLRRPRLLVEQLRFIGNDSFIIIAVSGL 60 Query: 65 FVGFVLGLQGYYTLNKYGSEQALGLLVALSLTRELGPVVTALLFAGRAGTSLTAEIGLMK 124 FVGFVLGLQGYYTLN+YGSEQALGLLVALSL RELGPVVTALLFAGRAGTSLTAEIGLMK Sbjct: 61 FVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMK 120 Query: 125 AGEQLSAMEMMAVNPLQRVVAPRFWAGVIAMPVLAAIFSAVGVIGGYVVGVLLIGVDEGA 184 A E+L AMEMMAV+PL RV+APRFW G IAMP+LAAIFSAVG++GGY VGV LIGVD GA Sbjct: 121 ANEELIAMEMMAVDPLARVLAPRFWGGFIAMPLLAAIFSAVGILGGYFVGVGLIGVDAGA 180 Query: 185 FWSQMQGGVDVWNDIANGVLKSVVFGVAVTFVALFQGYEAKPTPEGSNGARHH 237 FWSQMQ GVDV D+ NGV+KSVVFGVAVTFVAL+QGYEAK TPEG + A Sbjct: 181 FWSQMQAGVDVVKDVLNGVIKSVVFGVAVTFVALYQGYEAKATPEGVSRATTR 233 >PM0175 [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component Pmu Pasteurella multocida Length = 261 Score = 244 bits (623), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 132/230 (57%), Positives = 166/230 (72%), Gaps = 2/230 (0%) Query: 6 VSGLGRSLREFVVGVGFAGRM-FASMLGSSLGLLRRPRLITDQIHFIGNYSLVIIAVSGL 64 +S LG +G AG M F +++G P LI Q+H +G SL+II +SGL Sbjct: 5 ISELGHHAISSCRAIGRAGFMLFGALIGKPQWRKHTPLLI-KQLHVLGVQSLLIIMLSGL 63 Query: 65 FVGFVLGLQGYYTLNKYGSEQALGLLVALSLTRELGPVVTALLFAGRAGTSLTAEIGLMK 124 F+G VLGLQGY L + +E +LG LVALSL RELGPVVTALLFAGRAG++LTAEIGLMK Sbjct: 64 FIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 123 Query: 125 AGEQLSAMEMMAVNPLQRVVAPRFWAGVIAMPVLAAIFSAVGVIGGYVVGVLLIGVDEGA 184 A EQLS++EMMAV+PL+RV+APRFWAGVIAMP+LA IF+A+G+ GG +VGV GVD G+ Sbjct: 124 ATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAIIFTAIGIWGGSLVGVDWKGVDAGS 183 Query: 185 FWSQMQGGVDVWNDIANGVLKSVVFGVAVTFVALFQGYEAKPTPEGSNGA 234 FWS MQ V D+ NG +KS+ F +AV ++ALF GY+ PT EG + A Sbjct: 184 FWSVMQNAVTWEKDLLNGFIKSLCFAIAVVWIALFNGYDCIPTSEGISKA 233 >VC2519 [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component Vch Vibrio cholerae Length = 258 Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 124/197 (62%), Positives = 152/197 (77%) Query: 38 LRRPRLITDQIHFIGNYSLVIIAVSGLFVGFVLGLQGYYTLNKYGSEQALGLLVALSLTR 97 +R L+ Q++ IG SL II VSGLF+G VL LQGY L YG+E +LG +VALSL R Sbjct: 36 IRHFPLLVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLR 95 Query: 98 ELGPVVTALLFAGRAGTSLTAEIGLMKAGEQLSAMEMMAVNPLQRVVAPRFWAGVIAMPV 157 ELGPVVTALLFAGRAG++LTAEIGLMKA EQLS++EMMAV+PL+RV+APRFWAGVI+MP+ Sbjct: 96 ELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPL 155 Query: 158 LAAIFSAVGVIGGYVVGVLLIGVDEGAFWSQMQGGVDVWNDIANGVLKSVVFGVAVTFVA 217 LA IF AVG+ GG +VGV G+D G+FWS MQ V++ DI N +K VVF VT++A Sbjct: 156 LAMIFMAVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIA 215 Query: 218 LFQGYEAKPTPEGSNGA 234 LF GY+A PT EG + A Sbjct: 216 LFNGYDAIPTSEGISRA 232 >YPO3574 [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component Ype Yersinia pestis Length = 260 Score = 239 bits (610), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 130/235 (55%), Positives = 171/235 (72%), Gaps = 2/235 (0%) Query: 1 MIAGLVSGLGRSLREFVVGVGFAGRM-FASMLGSSLGLLRRPRLITDQIHFIGNYSLVII 59 M+ ++ LGR G AG M F +++G + P LI Q++ +G SL+II Sbjct: 1 MLVKSLASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLI-KQLYSVGVQSLLII 59 Query: 60 AVSGLFVGFVLGLQGYYTLNKYGSEQALGLLVALSLTRELGPVVTALLFAGRAGTSLTAE 119 VSGLF+G VLGLQG+ L Y +E +LG++V+LSL RELGPVVTALLFAGRAG++LTAE Sbjct: 60 VVSGLFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAE 119 Query: 120 IGLMKAGEQLSAMEMMAVNPLQRVVAPRFWAGVIAMPVLAAIFSAVGVIGGYVVGVLLIG 179 IGLMKA EQ+S++EMMA++PL+RVVAPRFWAG+I+MP+L AIF AVG+ GG VVGV G Sbjct: 120 IGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKG 179 Query: 180 VDEGAFWSQMQGGVDVWNDIANGVLKSVVFGVAVTFVALFQGYEAKPTPEGSNGA 234 +D G FWS MQ V+ D+ N ++KS+VF + VT++ALF GY+A PT EG + A Sbjct: 180 IDSGFFWSAMQNAVEWRTDLLNCLIKSLVFALTVTWIALFNGYDAVPTSEGISRA 234 >yrbE [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component Eco Escherichia coli K12 Length = 260 Score = 237 bits (604), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 162/224 (72%), Gaps = 4/224 (1%) Query: 11 RSLREFVVGVGFAGRMFASMLGSSLGLLRRPRLITDQIHFIGNYSLVIIAVSGLFVGFVL 70 ++LR F G AG M + L + L+ Q++ +G S++II VSG+F+G VL Sbjct: 15 KTLRTF----GRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGVFIGMVL 70 Query: 71 GLQGYYTLNKYGSEQALGLLVALSLTRELGPVVTALLFAGRAGTSLTAEIGLMKAGEQLS 130 GLQGY L Y +E +LG+LVALSL RELGPVV ALLFAGRAG++LTAEIGLM+A EQLS Sbjct: 71 GLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRATEQLS 130 Query: 131 AMEMMAVNPLQRVVAPRFWAGVIAMPVLAAIFSAVGVIGGYVVGVLLIGVDEGAFWSQMQ 190 +MEMMAV+PL+RV++PRFWAGVI++P+L IF AVG+ GG +VGV G+D G FWS MQ Sbjct: 131 SMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGFFWSAMQ 190 Query: 191 GGVDVWNDIANGVLKSVVFGVAVTFVALFQGYEAKPTPEGSNGA 234 VD D+ N ++KSVVF + VT+++LF GY+A PT G + A Sbjct: 191 NAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRA 234 >ZyrbE [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component EcZ Escherichia coli O157:H7 EDL933 Length = 260 Score = 237 bits (604), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 162/224 (72%), Gaps = 4/224 (1%) Query: 11 RSLREFVVGVGFAGRMFASMLGSSLGLLRRPRLITDQIHFIGNYSLVIIAVSGLFVGFVL 70 ++LR F G AG M + L + L+ Q++ +G S++II VSG+F+G VL Sbjct: 15 KTLRTF----GRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGVFIGMVL 70 Query: 71 GLQGYYTLNKYGSEQALGLLVALSLTRELGPVVTALLFAGRAGTSLTAEIGLMKAGEQLS 130 GLQGY L Y +E +LG+LVALSL RELGPVV ALLFAGRAG++LTAEIGLM+A EQLS Sbjct: 71 GLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRATEQLS 130 Query: 131 AMEMMAVNPLQRVVAPRFWAGVIAMPVLAAIFSAVGVIGGYVVGVLLIGVDEGAFWSQMQ 190 +MEMMAV+PL+RV++PRFWAGVI++P+L IF AVG+ GG +VGV G+D G FWS MQ Sbjct: 131 SMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGFFWSAMQ 190 Query: 191 GGVDVWNDIANGVLKSVVFGVAVTFVALFQGYEAKPTPEGSNGA 234 VD D+ N ++KSVVF + VT+++LF GY+A PT G + A Sbjct: 191 NAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRA 234 >ECs4073 [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component Ecs Escherichia coli O157:H7 Length = 260 Score = 237 bits (604), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 162/224 (72%), Gaps = 4/224 (1%) Query: 11 RSLREFVVGVGFAGRMFASMLGSSLGLLRRPRLITDQIHFIGNYSLVIIAVSGLFVGFVL 70 ++LR F G AG M + L + L+ Q++ +G S++II VSG+F+G VL Sbjct: 15 KTLRTF----GRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGVFIGMVL 70 Query: 71 GLQGYYTLNKYGSEQALGLLVALSLTRELGPVVTALLFAGRAGTSLTAEIGLMKAGEQLS 130 GLQGY L Y +E +LG+LVALSL RELGPVV ALLFAGRAG++LTAEIGLM+A EQLS Sbjct: 71 GLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRATEQLS 130 Query: 131 AMEMMAVNPLQRVVAPRFWAGVIAMPVLAAIFSAVGVIGGYVVGVLLIGVDEGAFWSQMQ 190 +MEMMAV+PL+RV++PRFWAGVI++P+L IF AVG+ GG +VGV G+D G FWS MQ Sbjct: 131 SMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGFFWSAMQ 190 Query: 191 GGVDVWNDIANGVLKSVVFGVAVTFVALFQGYEAKPTPEGSNGA 234 VD D+ N ++KSVVF + VT+++LF GY+A PT G + A Sbjct: 191 NAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRA 234 >STM3312 [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component Sty Salmonella typhimurium LT2 Length = 260 Score = 235 bits (600), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 126/234 (53%), Positives = 166/234 (70%) Query: 1 MIAGLVSGLGRSLREFVVGVGFAGRMFASMLGSSLGLLRRPRLITDQIHFIGNYSLVIIA 60 M+ ++ LG S + V G AG M + + + L+ Q++ +G S++II Sbjct: 1 MLLNALAALGHSGIKTVRTFGRAGLMLFNAIIGKPEFRKHAPLLVRQLYNVGVLSMLIII 60 Query: 61 VSGLFVGFVLGLQGYYTLNKYGSEQALGLLVALSLTRELGPVVTALLFAGRAGTSLTAEI 120 VSG+F+G VLGLQGY L Y +E +LG+LVALSL RELGPVV ALLFAGRAG++LTAEI Sbjct: 61 VSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEI 120 Query: 121 GLMKAGEQLSAMEMMAVNPLQRVVAPRFWAGVIAMPVLAAIFSAVGVIGGYVVGVLLIGV 180 GLM+A EQLS+MEMMAV+PL+RV++PRFWAGVI++P+L IF AVG+ GG +VGV G+ Sbjct: 121 GLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGI 180 Query: 181 DEGAFWSQMQGGVDVWNDIANGVLKSVVFGVAVTFVALFQGYEAKPTPEGSNGA 234 D G FWS MQ VD D+ N ++KSVVF + VT++ALF GY+A PT G + A Sbjct: 181 DAGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRA 234 >HI1086 [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component Hin Haemophilus influenzae Length = 261 Score = 233 bits (595), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 134/235 (57%), Positives = 173/235 (73%), Gaps = 2/235 (0%) Query: 1 MIAGLVSGLGRSLREFVVGVGFAGRM-FASMLGSSLGLLRRPRLITDQIHFIGNYSLVII 59 MI +S LG+ + +F +G AG M F +++G + + L+ Q+H +G SL+II Sbjct: 1 MIVNFISALGKQVIDFFRALGRAGFMLFGALIGKP-QIRKHFPLLVKQMHVLGVQSLLII 59 Query: 60 AVSGLFVGFVLGLQGYYTLNKYGSEQALGLLVALSLTRELGPVVTALLFAGRAGTSLTAE 119 +SGLF+G VLGLQGY L + +E +LG LVALSL RELGPVVTALLFAGRAG++LTAE Sbjct: 60 LLSGLFIGMVLGLQGYVVLIDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAE 119 Query: 120 IGLMKAGEQLSAMEMMAVNPLQRVVAPRFWAGVIAMPVLAAIFSAVGVIGGYVVGVLLIG 179 IGLMKA EQLS++EMMAV+PL+RV+APRFWAGVI+MPVL+ +F A+G+ GG +VGV G Sbjct: 120 IGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPVLSILFIAIGIWGGSLVGVDWKG 179 Query: 180 VDEGAFWSQMQGGVDVWNDIANGVLKSVVFGVAVTFVALFQGYEAKPTPEGSNGA 234 VD G+FWS MQ V DI NG +K+V F VAVT++ALF GY+ PT EG + A Sbjct: 180 VDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQA 234 >NMB1965 [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component Nme Neisseria meningitidis MC58 Length = 258 Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 112/191 (58%), Positives = 143/191 (74%) Query: 40 RPRLITDQIHFIGNYSLVIIAVSGLFVGFVLGLQGYYTLNKYGSEQALGLLVALSLTREL 99 RPRL Q++F G S++I+AVSGLFVG VLGLQGY L+K+ S LG +VA SL REL Sbjct: 38 RPRLSVRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLREL 97 Query: 100 GPVVTALLFAGRAGTSLTAEIGLMKAGEQLSAMEMMAVNPLQRVVAPRFWAGVIAMPVLA 159 GPV+ A+LFA AG ++T+EIGLMK EQL AM +MAVNP+ RVVAPRFWAGV +MP+LA Sbjct: 98 GPVLAAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLA 157 Query: 160 AIFSAVGVIGGYVVGVLLIGVDEGAFWSQMQGGVDVWNDIANGVLKSVVFGVAVTFVALF 219 +IF+ G+ G Y+VGV +G+D G FWSQMQ + + D+ NG++KS FGVAVT +A+ Sbjct: 158 SIFNVAGIFGAYLVGVTWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVH 217 Query: 220 QGYEAKPTPEG 230 QG+ PT EG Sbjct: 218 QGFHCVPTSEG 228