BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0103.p (265 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2959 [M] COG2853 Surface lipoprotein Rso Ralstonia solanacearum 181 2e-45 PA2800 [M] COG2853 Surface lipoprotein Pae Pseudomonas aeruginosa 170 3e-42 ZvacJ [M] COG2853 Surface lipoprotein EcZ Escherichia coli O157:... 137 2e-32 ECs3229 [M] COG2853 Surface lipoprotein Ecs Escherichia coli O15... 137 2e-32 PM1501 [M] COG2853 Surface lipoprotein Pmu Pasteurella multocida 136 4e-32 vacJ [M] COG2853 Surface lipoprotein Eco Escherichia coli K12 136 5e-32 XF0416 [M] COG2853 Surface lipoprotein Xfa Xylella fastidiosa 9a5c 135 1e-31 STM2392 [M] COG2853 Surface lipoprotein Sty Salmonella typhimuri... 134 2e-31 YPO2743 [M] COG2853 Surface lipoprotein Ype Yersinia pestis 130 3e-30 RSp0916 [M] COG2853 Surface lipoprotein Rso Ralstonia solanacearum 127 2e-29 >RSc2959 [M] COG2853 Surface lipoprotein Rso Ralstonia solanacearum Length = 269 Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 95/185 (51%), Positives = 121/185 (65%), Gaps = 1/185 (0%) Query: 17 IALAAAVMTGCASTSN-NPNDPLEGFNRTMFSFNDTVDKVALKPAAQAYDAVVPSPVQRG 75 +A +A ++ GCA+ N NP DP+E FNR +F ND +DK LKP AQ Y VVPSP + Sbjct: 17 MAASAVLLAGCATGPNANPADPIEPFNREVFRINDDLDKGVLKPVAQTYVDVVPSPARTA 76 Query: 76 VGNFFGNIGDLWSSVNQLLQGRIEQGVSTFMRVAINTTFGLGGVLDVATEARLPREKSDF 135 V NFF N GD++S+VN LLQ + + MRVAINT GLGG++D+A++A LP+ K DF Sbjct: 77 VSNFFSNAGDVYSAVNNLLQLKGTAALEDTMRVAINTVLGLGGLIDIASDAGLPKHKEDF 136 Query: 136 GQTLGKWGVGSGPYVVLPFFGPSTLRDTAGMPVDLYGDLWTYKRPTRWRNVGTVVRIVDR 195 GQTLG WGV +G Y+V P GPST+RDTAG VD D TY + +R+VD Sbjct: 137 GQTLGVWGVPAGAYIVWPLLGPSTVRDTAGFLVDWQLDPLTYFNNSAVTYSLAALRVVDA 196 Query: 196 RAQLL 200 RA LL Sbjct: 197 RAGLL 201 >PA2800 [M] COG2853 Surface lipoprotein Pae Pseudomonas aeruginosa Length = 234 Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 89/187 (47%), Positives = 111/187 (59%) Query: 17 IALAAAVMTGCASTSNNPNDPLEGFNRTMFSFNDTVDKVALKPAAQAYDAVVPSPVQRGV 76 +A A+ + S + + DP E NR +F+FNDT+D ALKP AQ Y V P+ VQ GV Sbjct: 16 LACASLALAPTLSLAASEEDPWESINRPIFTFNDTLDTYALKPLAQGYQKVTPNFVQDGV 75 Query: 77 GNFFGNIGDLWSSVNQLLQGRIEQGVSTFMRVAINTTFGLGGVLDVATEARLPREKSDFG 136 NFF N+GD+ + N LLQ + R+ N+TFGL G++DVAT L R DFG Sbjct: 76 HNFFNNLGDVKNLANNLLQAKFHNAGVDTSRLLFNSTFGLAGLIDVATPMGLQRNDEDFG 135 Query: 137 QTLGKWGVGSGPYVVLPFFGPSTLRDTAGMPVDLYGDLWTYKRPTRWRNVGTVVRIVDRR 196 QTLG WGVGSGPYV+LPF GPSTLRD D+Y + Y R RNV + VD R Sbjct: 136 QTLGYWGVGSGPYVMLPFLGPSTLRDAPAKIPDIYVSPYHYMDDVRARNVMFGINTVDTR 195 Query: 197 AQLLDAR 203 A LL + Sbjct: 196 ANLLKSE 202 >ZvacJ [M] COG2853 Surface lipoprotein EcZ Escherichia coli O157:H7 EDL933 Length = 251 Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 86/199 (43%), Positives = 117/199 (58%), Gaps = 12/199 (6%) Query: 13 RLGAIALAAAVMTGCASTSNNP---NDPLEGFNRTMFSFN-DTVDKVALKPAAQAYDAVV 68 RL A+AL ++ GCAS+ + +DPLEGFNRTM++FN + +D ++P A A+ V Sbjct: 4 RLSALALGTTLLVGCASSGTDQQGRSDPLEGFNRTMYNFNFNVLDPYIVRPVAVAWRDYV 63 Query: 69 PSPVQRGVGNFFGNIGDLWSSVNQLLQGRIEQGVSTFMRVAINTTFGLGGVLDVATEA-- 126 P P + G+ NF GN+ + VN LQG QG+ F R +NT G+GG +DVA A Sbjct: 64 PQPARNGLSNFTGNLEEPAVMVNYFLQGDPYQGMVHFTRFFLNTILGMGGFIDVAGMANP 123 Query: 127 RLPR-EKSDFGQTLGKWGVGSGPYVVLPFFGPSTLRDTAGMPVDLYGDLWTYKRPTRW-R 184 +L R E FG TLG +GVG GPYV LPF+G TLRD G D+ L+ W Sbjct: 124 KLQRTEPHRFGSTLGHYGVGYGPYVQLPFYGSFTLRDDGG---DMADGLYPVLSWLTWPM 180 Query: 185 NVGT-VVRIVDRRAQLLDA 202 +VG + ++ RAQLLD+ Sbjct: 181 SVGKWTLEGIETRAQLLDS 199 >ECs3229 [M] COG2853 Surface lipoprotein Ecs Escherichia coli O157:H7 Length = 251 Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 86/199 (43%), Positives = 117/199 (58%), Gaps = 12/199 (6%) Query: 13 RLGAIALAAAVMTGCASTSNNP---NDPLEGFNRTMFSFN-DTVDKVALKPAAQAYDAVV 68 RL A+AL ++ GCAS+ + +DPLEGFNRTM++FN + +D ++P A A+ V Sbjct: 4 RLSALALGTTLLVGCASSGTDQQGRSDPLEGFNRTMYNFNFNVLDPYIVRPVAVAWRDYV 63 Query: 69 PSPVQRGVGNFFGNIGDLWSSVNQLLQGRIEQGVSTFMRVAINTTFGLGGVLDVATEA-- 126 P P + G+ NF GN+ + VN LQG QG+ F R +NT G+GG +DVA A Sbjct: 64 PQPARNGLSNFTGNLEEPAVMVNYFLQGDPYQGMVHFTRFFLNTILGMGGFIDVAGMANP 123 Query: 127 RLPR-EKSDFGQTLGKWGVGSGPYVVLPFFGPSTLRDTAGMPVDLYGDLWTYKRPTRW-R 184 +L R E FG TLG +GVG GPYV LPF+G TLRD G D+ L+ W Sbjct: 124 KLQRTEPHRFGSTLGHYGVGYGPYVQLPFYGSFTLRDDGG---DMADGLYPVLSWLTWPM 180 Query: 185 NVGT-VVRIVDRRAQLLDA 202 +VG + ++ RAQLLD+ Sbjct: 181 SVGKWTLEGIETRAQLLDS 199 >PM1501 [M] COG2853 Surface lipoprotein Pmu Pasteurella multocida Length = 246 Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 82/195 (42%), Positives = 117/195 (60%), Gaps = 8/195 (4%) Query: 13 RLGAIALAAAVMTGCA---STSNNPNDPLEGFNRTMFSFN-DTVDKVALKPAAQAYDAVV 68 RL + LAA V++GCA S + DPLEGFNRTM+ FN VD LKP A + V Sbjct: 6 RLVTLFLAATVLSGCATIDSKTGERKDPLEGFNRTMWDFNYKVVDPYLLKPVATGWKEYV 65 Query: 69 PSPVQRGVGNFFGNIGDLWSSVNQLLQGRIEQGVSTFMRVAINTTFGLGGVLDVATEARL 128 P+PV+ G+ N N+ + S VN+LL G ++ ++ F R INT FG+GG++DVA+ + Sbjct: 66 PTPVKSGLTNVANNLDEPASFVNRLLSGEFKKAMTHFNRFWINTVFGIGGLIDVASYSPP 125 Query: 129 PR--EKSDFGQTLGKWGVGSGPYVVLPFFGPSTLRDTAGMPVDLYGDLWTYKRPTRWRNV 186 R +S FG TLG++GV +G YV+LP +GP+T R G D + + P W + Sbjct: 126 LRVENQSRFGDTLGRYGVETGSYVMLPLYGPATPRQDIGNLADTTYPMLSLLGP--WSLL 183 Query: 187 GTVVRIVDRRAQLLD 201 + V+I+D RA+ LD Sbjct: 184 KSGVQIIDGRAKALD 198 >vacJ [M] COG2853 Surface lipoprotein Eco Escherichia coli K12 Length = 251 Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 85/199 (42%), Positives = 118/199 (59%), Gaps = 12/199 (6%) Query: 13 RLGAIALAAAVMTGCASTSNNP---NDPLEGFNRTMFSFN-DTVDKVALKPAAQAYDAVV 68 RL A+AL ++ GCAS+ + +DPLEGFNRTM++FN + +D ++P A A+ V Sbjct: 4 RLSALALGTTLLVGCASSGTDQQGRSDPLEGFNRTMYNFNFNVLDPYIVRPVAVAWRDYV 63 Query: 69 PSPVQRGVGNFFGNIGDLWSSVNQLLQGRIEQGVSTFMRVAINTTFGLGGVLDVATEA-- 126 P P + G+ NF GN+ + VN LQG QG+ F R +NT G+GG +DVA A Sbjct: 64 PQPARNGLSNFTGNLEEPAVMVNYFLQGDPYQGMVHFTRFFLNTILGMGGFIDVAGMANP 123 Query: 127 RLPR-EKSDFGQTLGKWGVGSGPYVVLPFFGPSTLRDTAGMPVDLYGDLWTYKRPTRW-R 184 +L R E FG TLG +GVG GPYV LPF+G TLRD G D + + ++ W Sbjct: 124 KLQRTEPHRFGSTLGHYGVGYGPYVQLPFYGSFTLRDDGGDMADGFYPVLSW---LTWPM 180 Query: 185 NVGT-VVRIVDRRAQLLDA 202 +VG + ++ RAQLLD+ Sbjct: 181 SVGKWTLEGIETRAQLLDS 199 >XF0416 [M] COG2853 Surface lipoprotein Xfa Xylella fastidiosa 9a5c Length = 351 Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 80/199 (40%), Positives = 107/199 (53%), Gaps = 12/199 (6%) Query: 10 YASRLGAIALAAAVMTGCASTSNNPN--------DPLEGFNRTMFSFNDTVDKVALKPAA 61 YA+ GAI+ + G + T+N P DP E +NR M FN +D+ +P A Sbjct: 87 YAALYGAISPS----VGHSGTNNIPKPNDTHTTYDPWERYNRAMHQFNVVIDRNLARPLA 142 Query: 62 QAYDAVVPSPVQRGVGNFFGNIGDLWSSVNQLLQGRIEQGVSTFMRVAINTTFGLGGVLD 121 AY VVP Q GV NFF N+ + VNQ+LQ + T R +N+T GLGG+LD Sbjct: 143 NAYVHVVPKKAQVGVTNFFNNLSSPLTMVNQVLQNHPVYALQTLGRFLLNSTLGLGGILD 202 Query: 122 VATEARLPREKSDFGQTLGKWGVGSGPYVVLPFFGPSTLRDTAGMPVDLYGDLWTYKRPT 181 A+ A++PR +FGQTL WG + Y LP FGP T+RDT G+ DL L Sbjct: 203 PASAAKIPRRTENFGQTLALWGWYNSRYFELPLFGPRTVRDTFGLAGDLPLSLLRRIDNN 262 Query: 182 RWRNVGTVVRIVDRRAQLL 200 WR +++VD RA+LL Sbjct: 263 TWRYSLQGLQLVDTRARLL 281 >STM2392 [M] COG2853 Surface lipoprotein Sty Salmonella typhimurium LT2 Length = 251 Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 82/199 (41%), Positives = 115/199 (57%), Gaps = 12/199 (6%) Query: 13 RLGAIALAAAVMTGCASTSNNP---NDPLEGFNRTMFSFN-DTVDKVALKPAAQAYDAVV 68 RL A+AL ++ GCAS+ +DP EGFNRTM++FN + +D ++P A A+ V Sbjct: 4 RLSALALGTTLLVGCASSGTEQQGRSDPFEGFNRTMYNFNFNVLDPYVVRPVAVAWRDYV 63 Query: 69 PSPVQRGVGNFFGNIGDLWSSVNQLLQGRIEQGVSTFMRVAINTTFGLGGVLDVATEA-- 126 P P + G+ NF GN+ + VN LQG QG+ F R +NT G+GG +DVA A Sbjct: 64 PQPARNGLSNFTGNLEEPAIMVNYFLQGDPYQGMVHFTRFFLNTLLGMGGFIDVAGMANP 123 Query: 127 RLPR-EKSDFGQTLGKWGVGSGPYVVLPFFGPSTLRDTAGMPVDLYGDLWTYKRPTRW-R 184 +L R E FG TLG +GVG GPY+ LPF+G TLR+ G D+ L+ W Sbjct: 124 KLQRVEPHRFGSTLGHYGVGYGPYMQLPFYGSFTLREDGG---DMADTLYPVLSWLTWPM 180 Query: 185 NVGT-VVRIVDRRAQLLDA 202 ++G + ++ RAQLLD+ Sbjct: 181 SIGKWTIEGIETRAQLLDS 199 >YPO2743 [M] COG2853 Surface lipoprotein Ype Yersinia pestis Length = 254 Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 81/200 (40%), Positives = 114/200 (57%), Gaps = 12/200 (6%) Query: 13 RLGAIALAAAVMTGCASTSNNP-----NDPLEGFNRTMFSFN-DTVDKVALKPAAQAYDA 66 RL +A A+ ++ GCAS+S + +DPLEGFNR MF+FN + +D ++P A + Sbjct: 4 RLTGLAFASVLLVGCASSSPDHMEQGRSDPLEGFNRAMFNFNYEVLDPYVVRPVAVVWRD 63 Query: 67 VVPSPVQRGVGNFFGNIGDLWSSVNQLLQGRIEQGVSTFMRVAINTTFGLGGVLDVATEA 126 VP P + G+ NF GN+ + S VN L G + F R +NT G+GG++DVA A Sbjct: 64 YVPQPARNGMSNFLGNLEEPASMVNSFLVGDPYNAMKHFNRFFLNTVLGMGGLIDVAGMA 123 Query: 127 --RLPRE-KSDFGQTLGKWGVGSGPYVVLPFFGPSTLRDTAGMPVDLYGDLWTYKRPTRW 183 +L ++ FG TLG + VG GPYVVLP +G TLR+ G D + +Y T W Sbjct: 124 NPKLAKQVPQRFGSTLGHYDVGYGPYVVLPGYGSFTLREDGGQLADTVYPVLSYL--TFW 181 Query: 184 RNVGT-VVRIVDRRAQLLDA 202 G V+ V+ RAQLLD+ Sbjct: 182 MAAGKWVLEGVETRAQLLDS 201 >RSp0916 [M] COG2853 Surface lipoprotein Rso Ralstonia solanacearum Length = 296 Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 69/171 (40%), Positives = 95/171 (55%) Query: 30 TSNNPNDPLEGFNRTMFSFNDTVDKVALKPAAQAYDAVVPSPVQRGVGNFFGNIGDLWSS 89 T++ +DP EGFNR + N +DK ++P AYDAV P PVQ V FFGN+ + Sbjct: 95 TNSGISDPWEGFNRKTHAINSVLDKYIVRPVGVAYDAVTPDPVQHSVTRFFGNLRGPSTV 154 Query: 90 VNQLLQGRIEQGVSTFMRVAINTTFGLGGVLDVATEARLPREKSDFGQTLGKWGVGSGPY 149 VNQLLQG+ + + R +NTT G+GG+ D A+ L RE +D GQT WG Y Sbjct: 155 VNQLLQGKPFKAGQSVSRFVVNTTVGIGGLFDPASSLGLSREDADLGQTFASWGWRDSRY 214 Query: 150 VVLPFFGPSTLRDTAGMPVDLYGDLWTYKRPTRWRNVGTVVRIVDRRAQLL 200 +VLP GP+TLRD M + +Y T + ++I + RA+LL Sbjct: 215 IVLPLLGPTTLRDATSMFGEQKLSPTSYVSDTALKTGLQFIQITNNRARLL 265