BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0102.p (213 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2958 [Q] COG2854 ABC-type transport system involved in resist... 186 4e-47 NMB1963 [Q] COG2854 ABC-type transport system involved in resist... 95 1e-19 NMA0488 [Q] COG2854 ABC-type transport system involved in resist... 93 3e-19 STM3310 [Q] COG2854 ABC-type transport system involved in resist... 75 1e-13 yrbC [Q] COG2854 ABC-type transport system involved in resistanc... 73 4e-13 ZyrbC [Q] COG2854 ABC-type transport system involved in resistan... 72 7e-13 ECs4071 [Q] COG2854 ABC-type transport system involved in resist... 72 7e-13 HI1084 [Q] COG2854 ABC-type transport system involved in resista... 71 2e-12 VC2517 [Q] COG2854 ABC-type transport system involved in resista... 68 2e-11 YPO3572 [Q] COG2854 ABC-type transport system involved in resist... 67 3e-11 >RSc2958 [Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component Rso Ralstonia solanacearum Length = 211 Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 97/206 (47%), Positives = 135/206 (65%), Gaps = 4/206 (1%) Query: 2 KMLNKLFAIAAFAVPALAFTGAASAQEAPDALVKRISSEVLDTAKNDKDIQSGNNTRIMQ 61 K+L+ LFA F A A +A VK +VL T K D D++SGN ++ Q Sbjct: 4 KLLHSLFAGLTFMAAVAAVPAHAQEADA-QTTVKTAVDDVLATIKGDSDLRSGNMQKVFQ 62 Query: 62 LVEEKILPYVDFQRMTQLAAGPFWRQATPDQQAQLVNEFRSLLVFTYSGALSQVRDQKIV 121 LV++KI+P DF+R TQ+A G FW QATP+QQ Q+ + F++LLV TY+GAL+ VR+Q + Sbjct: 63 LVDQKIVPRADFKRTTQIAMGRFWSQATPEQQQQIQDGFKTLLVRTYAGALANVRNQTVS 122 Query: 122 FKPLRAAPGDTEVEVNSQVISDRGGEPIQLSYRLEKKGDGWKLYDVNVLGAWLVEAYKGT 181 +KP RAA DT+V V S V + GEP+ L YR+EK +GWK+YD+N+ G WL E YK Sbjct: 123 YKPFRAAADDTDVVVRSTV--NNNGEPVALDYRMEKSANGWKVYDINISGLWLSETYKNQ 180 Query: 182 FSNEINK-GGIDGLIKALSDKNKQLA 206 F+ I+K GG+ GL++ L ++N QLA Sbjct: 181 FAEVISKRGGVSGLVQFLDERNAQLA 206 >NMB1963 [Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component Nme Neisseria meningitidis MC58 Length = 196 Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 101/195 (51%), Gaps = 10/195 (5%) Query: 10 IAAFAVPALAFTGAASAQEAPDALVKRISSEVLDTAKNDKDIQSGNNTRIMQLVEEKILP 69 I+A + L+ A +A + +++ +++VL KN G+ Q E +P Sbjct: 7 ISALGIGILSIGMAFAAPADAVSQIRQNATQVLSILKN------GDANTARQKAEAYAIP 60 Query: 70 YVDFQRMTQLAAGPFWRQATPDQQAQLVNEFRSLLVFTYSGALSQVRDQKIVFK--PLRA 127 Y DFQRMT LA G WR A+ Q+ L EF++LL+ TYSG + ++++ + K P+ Sbjct: 61 YFDFQRMTALAVGNPWRTASDAQKQALAKEFQTLLIRTYSGTMLKLKNANVNVKDNPI-V 119 Query: 128 APGDTEVEVNSQVISDRGGEPIQLSYRLEKKGDGWKLYDVNVLGAWLVEAYKGTFSNEIN 187 G E+ V ++V G +P+ + + + G ++ Y+V + GA LV Y+ F I Sbjct: 120 NKGGKEIIVRAEV-GVPGQKPVNMDFTTYQSGGKYRTYNVAIEGASLVTVYRNQFGEIIK 178 Query: 188 KGGIDGLIKALSDKN 202 G+DGLI L KN Sbjct: 179 AKGVDGLIAELKAKN 193 >NMA0488 [Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component NmA Neisseria meningitidis Z2491 Length = 196 Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 4/154 (2%) Query: 51 IQSGNNTRIMQLVEEKILPYVDFQRMTQLAAGPFWRQATPDQQAQLVNEFRSLLVFTYSG 110 ++SG+ Q E +PY DFQRMT LA G WR A+ Q+ L EF++LL+ TYSG Sbjct: 42 LKSGDANTARQKAEAYAIPYFDFQRMTALAVGNPWRTASDAQKQALAKEFQTLLIRTYSG 101 Query: 111 ALSQVRDQKIVFK--PLRAAPGDTEVEVNSQVISDRGGEPIQLSYRLEKKGDGWKLYDVN 168 + ++++ + K P+ G E+ V ++V G +P+ + + + G ++ Y+V Sbjct: 102 TMLKLKNANVNVKDNPI-VNKGGKEIIVRAEV-GVPGQKPVNMDFTTYQSGGKYRTYNVA 159 Query: 169 VLGAWLVEAYKGTFSNEINKGGIDGLIKALSDKN 202 + GA LV Y+ F I G+DGLI L KN Sbjct: 160 IEGASLVTVYRNQFGEIIKAKGVDGLIAELKAKN 193 >STM3310 [Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component Sty Salmonella typhimurium LT2 Length = 211 Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 3/204 (1%) Query: 3 MLNKLFAIAAFAVPALAFTGAASAQEAPDALVKRISSEVLDTAKNDKDIQSGNNTRIMQL 62 M +L +A + L+ AA Q P L+ + + D KN++ N + + Sbjct: 1 MFKRLMMVALLVIAPLSAATAAD-QSNPYKLMNEAAQKTFDRLKNEQPKIRANPDYLRDV 59 Query: 63 VEEKILPYVDFQRMTQLAAGPFWRQATPDQQAQLVNEFRSLLVFTYSGALSQVRDQKIVF 122 V++++LPYV + L G ++++ATP Q+ FR L Y AL+ Q Sbjct: 60 VDQELLPYVQVKYAGALVLGRYYKEATPAQREAYFAAFREYLKQAYGQALAMYHGQTYQI 119 Query: 123 KPLRAAPGDTEVEVNSQVISDRGGEPIQLSYRLEK--KGDGWKLYDVNVLGAWLVEAYKG 180 P + T V + +I G P++L ++ K + W+ YD+ G ++ + Sbjct: 120 APEQPLGDATIVPIRVTIIDPNGRPPVRLDFQWRKNTQTGNWQAYDMIAEGVSMITTKQN 179 Query: 181 TFSNEINKGGIDGLIKALSDKNKQ 204 +S+ + GIDGL L ++Q Sbjct: 180 EWSDLLRTKGIDGLTAQLKSISQQ 203 >yrbC [Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component Eco Escherichia coli K12 Length = 211 Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 3/204 (1%) Query: 3 MLNKLFAIAAFAVPALAFTGAASAQEAPDALVKRISSEVLDTAKNDKDIQSGNNTRIMQL 62 M +L +A + L+ AA Q P L+ + + D KN++ N + + Sbjct: 1 MFKRLMMVALLVIAPLSAATAAD-QTNPYKLMDEAAQKTFDRLKNEQPQIRANPDYLRTI 59 Query: 63 VEEKILPYVDFQRMTQLAAGPFWRQATPDQQAQLVNEFRSLLVFTYSGALSQVRDQKIVF 122 V++++LPYV + L G +++ ATP Q+ FR L Y AL+ Q Sbjct: 60 VDQELLPYVQVKYAGALVLGQYYKSATPAQREAYFAAFREYLKQAYGQALAMYHGQTYQI 119 Query: 123 KPLRAAPGDTEVEVNSQVISDRGGEPIQLSYRLEKKGD--GWKLYDVNVLGAWLVEAYKG 180 P + T V + +I G P++L ++ K W+ YD+ G ++ + Sbjct: 120 APEQPLGDKTIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGNWQAYDMIAEGVSMITTKQN 179 Query: 181 TFSNEINKGGIDGLIKALSDKNKQ 204 + + GIDGL L ++Q Sbjct: 180 EWGTLLRTKGIDGLTAQLKSISQQ 203 >ZyrbC [Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component EcZ Escherichia coli O157:H7 EDL933 Length = 211 Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 3/204 (1%) Query: 3 MLNKLFAIAAFAVPALAFTGAASAQEAPDALVKRISSEVLDTAKNDKDIQSGNNTRIMQL 62 M +L +A + L+ AA Q P L+ + + D KN++ N + + Sbjct: 1 MFKRLMMVALLVIAPLSAATAAD-QTNPYKLMDEAAQKTFDRLKNEQPQIRANPDYLRTI 59 Query: 63 VEEKILPYVDFQRMTQLAAGPFWRQATPDQQAQLVNEFRSLLVFTYSGALSQVRDQKIVF 122 V++++LPYV + L G +++ ATP Q+ FR L Y AL+ Q Sbjct: 60 VDQELLPYVQVKYAGALVLGQYYKSATPAQRDAYFAAFREYLKQAYGQALAMYHGQTYQI 119 Query: 123 KPLRAAPGDTEVEVNSQVISDRGGEPIQLSYRLEKKGD--GWKLYDVNVLGAWLVEAYKG 180 P + T V + +I G P++L ++ K W+ YD+ G ++ + Sbjct: 120 APEQPLGDKTIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGNWQAYDMIAEGVSMITTKQN 179 Query: 181 TFSNEINKGGIDGLIKALSDKNKQ 204 + + GIDGL L ++Q Sbjct: 180 EWGTLLRTKGIDGLTAQLKSISQQ 203 >ECs4071 [Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component Ecs Escherichia coli O157:H7 Length = 211 Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 3/204 (1%) Query: 3 MLNKLFAIAAFAVPALAFTGAASAQEAPDALVKRISSEVLDTAKNDKDIQSGNNTRIMQL 62 M +L +A + L+ AA Q P L+ + + D KN++ N + + Sbjct: 1 MFKRLMMVALLVIAPLSAATAAD-QTNPYKLMDEAAQKTFDRLKNEQPQIRANPDYLRTI 59 Query: 63 VEEKILPYVDFQRMTQLAAGPFWRQATPDQQAQLVNEFRSLLVFTYSGALSQVRDQKIVF 122 V++++LPYV + L G +++ ATP Q+ FR L Y AL+ Q Sbjct: 60 VDQELLPYVQVKYAGALVLGQYYKSATPAQRDAYFAAFREYLKQAYGQALAMYHGQTYQI 119 Query: 123 KPLRAAPGDTEVEVNSQVISDRGGEPIQLSYRLEKKGD--GWKLYDVNVLGAWLVEAYKG 180 P + T V + +I G P++L ++ K W+ YD+ G ++ + Sbjct: 120 APEQPLGDKTIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGNWQAYDMIAEGVSMITTKQN 179 Query: 181 TFSNEINKGGIDGLIKALSDKNKQ 204 + + GIDGL L ++Q Sbjct: 180 EWGTLLRTKGIDGLTAQLKSISQQ 203 >HI1084 [Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component Hin Haemophilus influenzae Length = 214 Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 4/204 (1%) Query: 4 LNKLFAIAAFAVPALAFTGAASAQEAPDALVKRISSEVL-DTAKNDKDIQSGNNTRIMQL 62 L K F I F + A T A A+ +P L+++ + ++ D N I+ N + + Sbjct: 6 LKKWFTILTFVLTAFLVTRTAIAETSPYVLMQQAADKLFSDIQANQSKIKQDPN-YLRTI 64 Query: 63 VEEKILPYVDFQRMTQLAAGPFWRQATPDQQAQLVNEFRSLLVFTYSGALSQVRDQKIVF 122 V +LPYV+ + G +++ + +Q+ + F L+ Y+ AL+ +QKI Sbjct: 65 VRNDLLPYVNLEYAGSKVLGSYYKSTSAEQREKFFKTFGELIEQKYAQALTNYSNQKIQI 124 Query: 123 KPLRAAPGDTEVEVNSQVISDRGGEPIQLSYRLEK--KGDGWKLYDVNVLGAWLVEAYKG 180 + + + + + +I G PI L ++ K K WK+YD+ G ++E Sbjct: 125 ESEKELGDNNFINIRVNIIQANGVAPILLYFKWRKGNKSGEWKVYDMVGAGVSMLEDTIK 184 Query: 181 TFSNEINKGGIDGLIKALSDKNKQ 204 + +NK GID LI + Q Sbjct: 185 NWVGILNKQGIDTLITKMQQSASQ 208 >VC2517 [Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component Vch Vibrio cholerae Length = 213 Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 2/193 (1%) Query: 7 LFAIAAFAVPALAFTGAASAQEAPDALVKRISSEVLDTAKNDKDIQSGNNTRIMQLVEEK 66 L + +P LA T A P ++K ++ + D KN++ + + +VEE+ Sbjct: 7 LLLASTLLMPWLA-TAATIDTSNPYQMMKAVAEKSFDRLKNEQPKVHQDPQYLKVIVEEE 65 Query: 67 ILPYVDFQRMTQLAAGPFWRQATPDQQAQLVNEFRSLLVFTYSGALSQVRDQKIVFKPLR 126 ++PYV+ Q GP + A + A+ V FR+ LV Y+ L+Q +Q I F P Sbjct: 66 LMPYVNEQYAALKLLGPNLKGAKREDVAEFVKAFRAYLVTNYAQVLTQYTNQTIEFGPEM 125 Query: 127 AAPGDTEVEVNSQVISDRGGEPIQLSYRLEKKGDG-WKLYDVNVLGAWLVEAYKGTFSNE 185 D + I D I+L ++L ++ G WK +D+ G L+ + + +S + Sbjct: 126 PLEEDRRITTVKVEILDAPRPNIKLEFKLRQEKSGEWKAFDMIAEGISLLSSKQSEWSGK 185 Query: 186 INKGGIDGLIKAL 198 I + GI + K L Sbjct: 186 IRQEGILAVAKEL 198 >YPO3572 [Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component Ype Yersinia pestis Length = 207 Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 5/204 (2%) Query: 3 MLNKLFAIAAFAVPALAFTGAASAQEAPDALVKRISSEVLDTAKNDKDIQSGNNTRIMQL 62 M +LF +A A+ L A Q P L+ + + KN++ N + + Sbjct: 1 MFKRLFMVALLAIAPLVH---AVDQSNPYRLMDEAAKKTFTRLKNEQPKIKQNPDYLRTI 57 Query: 63 VEEKILPYVDFQRMTQLAAGPFWRQATPDQQAQLVNEFRSLLVFTYSGALSQVRDQKIVF 122 V E++LP+V + L G +++ ATP Q+ N F L Y AL+ Q Sbjct: 58 VREELLPFVQIKYAGALVLGSYYKDATPAQREAYFNAFGKYLEQAYGQALALYHGQTYDV 117 Query: 123 KPLRAAPGDTEVEVNSQVISDRGGEPIQLSYRLEKKGD--GWKLYDVNVLGAWLVEAYKG 180 P + V + ++ G P++L ++ K W+ YD+ G ++ + Sbjct: 118 APDQPLGDANIVAIRVTILDPSGRPPVRLDFQWRKNSQTGNWQAYDMIAEGVSMISTKQN 177 Query: 181 TFSNEINKGGIDGLIKALSDKNKQ 204 +++ + + G+DGL + L KQ Sbjct: 178 EWASILRQKGVDGLTQQLLSAAKQ 201