BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0098.p (95 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2954 Non COG 129 2e-30 XF1414 [K] COG5007 Predicted transcriptional regulator, BolA sup... 68 6e-12 NMA0256 [K] COG5007 Predicted transcriptional regulator, BolA su... 67 8e-12 asr0798 [T] COG0271 Stress-induced morphogen (activity unknown) ... 66 2e-11 NMB0009 [K] COG5007 Predicted transcriptional regulator, BolA su... 62 2e-10 YPO3570 [K] COG5007 Predicted transcriptional regulator, BolA su... 60 1e-09 AGc3395 [T] COG0271 Stress-induced morphogen (activity unknown) ... 60 1e-09 SMc00487 [T] COG0271 Stress-induced morphogen (activity unknown)... 59 4e-09 ssr3122 [T] COG0271 Stress-induced morphogen (activity unknown) ... 58 5e-09 BMEI1128 [T] COG0271 Stress-induced morphogen (activity unknown)... 58 6e-09 >RSc2954 Non COG Length = 78 Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 61/77 (79%), Positives = 66/77 (85%) Query: 18 MLPTPELVKSYIAAGLDCQHLEVEGDGQHFTAVIVAEAFAGKRLIQRHQLVYAALGDRMR 77 MLPTPE +K YI AGL C+HLEVEGDGQHF A IV+ F GKRLIQRHQLVYAALGDRMR Sbjct: 1 MLPTPEQIKQYIEAGLPCEHLEVEGDGQHFFATIVSAQFEGKRLIQRHQLVYAALGDRMR 60 Query: 78 EEIHALSMKTLTPEEFQ 94 EIHALSMKTLTP E++ Sbjct: 61 AEIHALSMKTLTPAEWR 77 >XF1414 [K] COG5007 Predicted transcriptional regulator, BolA superfamily Xfa Xylella fastidiosa 9a5c Length = 75 Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 1/71 (1%) Query: 23 ELVKSYIAAGLDCQHLEVEG-DGQHFTAVIVAEAFAGKRLIQRHQLVYAALGDRMREEIH 81 E ++ I +GL +V G DG HF A ++ EAF GK + RH++VYA++GD M +H Sbjct: 4 ETIRKLIESGLPQARADVRGEDGVHFEATVICEAFRGKGPLARHRMVYASIGDLMGRAVH 63 Query: 82 ALSMKTLTPEE 92 AL +KTLTP+E Sbjct: 64 ALQLKTLTPDE 74 >NMA0256 [K] COG5007 Predicted transcriptional regulator, BolA superfamily NmA Neisseria meningitidis Z2491 Length = 82 Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 2/75 (2%) Query: 21 TPELVKSYIAAGLDCQHLEVEGDGQHFTAVIVAEAFAGKRLIQRHQLVYAALGDRMR-EE 79 TPE VK+ IA C+H+EVEGDG HF AVIV+ F GK + RH+L+ L ++ E Sbjct: 3 TPEQVKALIAGVAKCEHIEVEGDGHHFFAVIVSSEFEGKARLARHRLIKDGLKAQLESNE 62 Query: 80 IHALSMKT-LTPEEF 93 +HALS+ TP E+ Sbjct: 63 LHALSISVAATPAEW 77 >asr0798 [T] COG0271 Stress-induced morphogen (activity unknown) Nos Nostoc sp. PCC 7120 Length = 80 Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 4/75 (5%) Query: 21 TPELVKSYIAAGLDCQHLEVE---GDGQHFTAVIVAEAFAGKRLIQRHQLVYAALGDRMR 77 TP+ V+ I A L ++V+ G G H+ +V+ FAGKRL+Q+HQLVY AL M Sbjct: 3 TPQQVEEMIKAELPDAQVQVQDLTGGGDHYQVTVVSSQFAGKRLVQQHQLVYGALRQAMS 62 Query: 78 EE-IHALSMKTLTPE 91 E IHAL++KT TPE Sbjct: 63 TEAIHALALKTYTPE 77 >NMB0009 [K] COG5007 Predicted transcriptional regulator, BolA superfamily Nme Neisseria meningitidis MC58 Length = 82 Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 2/75 (2%) Query: 21 TPELVKSYIAAGLDCQHLEVEGDGQHFTAVIVAEAFAGKRLIQRHQLVYAALGDRMR-EE 79 T E VK+ I C+H+EVEGDG HF AVIV+ F GK + RH+L+ L ++ E Sbjct: 3 TSEQVKAMIEGVAKCEHIEVEGDGHHFFAVIVSSEFEGKARLARHRLIKDGLKAQLESNE 62 Query: 80 IHALSMKT-LTPEEF 93 +HALS+ TP E+ Sbjct: 63 LHALSISVAATPAEW 77 >YPO3570 [K] COG5007 Predicted transcriptional regulator, BolA superfamily Ype Yersinia pestis Length = 87 Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 2/81 (2%) Query: 16 LNMLPTPELVKSYIAAGLDCQHLEVEGDGQHFTAVIVAEAFAGKRLIQRHQLVYAALGDR 75 +N++ T E +K + L Q V GDG HF ++V E FA +++ Q VYA L + Sbjct: 1 MNLMDTNE-IKDVLMNALALQEAHVTGDGSHFQVIVVGELFADMNRVKKQQAVYAPLMEY 59 Query: 76 MREE-IHALSMKTLTPEEFQK 95 + + IHALS+K TP+E+Q+ Sbjct: 60 IADNRIHALSIKAYTPQEWQR 80 >AGc3395 [T] COG0271 Stress-induced morphogen (activity unknown) Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 87 Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 4/79 (5%) Query: 17 NMLP-TPELVKSYIAAGLDCQHLEVE---GDGQHFTAVIVAEAFAGKRLIQRHQLVYAAL 72 N +P P ++ I AG+ + + GDG H+ A +VAEAF GK +Q+HQ+VY AL Sbjct: 9 NTMPMKPGDIEDMIKAGIPGAKVTIRDLAGDGDHYAAEVVAEAFKGKTRVQQHQMVYDAL 68 Query: 73 GDRMREEIHALSMKTLTPE 91 M +HAL+++T PE Sbjct: 69 KGNMGGVLHALALQTSAPE 87 >SMc00487 [T] COG0271 Stress-induced morphogen (activity unknown) Sme Sinorhizobium meliloti Length = 77 Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 3/73 (4%) Query: 22 PELVKSYIAAGLDCQHLEVE---GDGQHFTAVIVAEAFAGKRLIQRHQLVYAALGDRMRE 78 P ++ I AG+ + + GDG H+ A +VAEAF GK +Q+HQ+VY AL M Sbjct: 5 PGDIEDMIKAGIPGARVTIRDLAGDGDHYAAEVVAEAFRGKTRVQQHQMVYNALKGNMGG 64 Query: 79 EIHALSMKTLTPE 91 +HAL+++T PE Sbjct: 65 ILHALALQTSAPE 77 >ssr3122 [T] COG0271 Stress-induced morphogen (activity unknown) Syn Synechocystis Length = 85 Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 26/53 (49%), Positives = 37/53 (69%), Gaps = 1/53 (1%) Query: 42 GDGQHFTAVIVAEAFAGKRLIQRHQLVYAALGDRMREE-IHALSMKTLTPEEF 93 G G H AV+V+ AF G+ +++HQ+VY AL D + E IHAL++KT TPE + Sbjct: 26 GGGDHLEAVVVSSAFTGQSRVKQHQMVYGALKDALASEAIHALALKTFTPEAW 78 >BMEI1128 [T] COG0271 Stress-induced morphogen (activity unknown) Bme Brucella melitensis Length = 77 Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 26/53 (49%), Positives = 37/53 (69%) Query: 39 EVEGDGQHFTAVIVAEAFAGKRLIQRHQLVYAALGDRMREEIHALSMKTLTPE 91 ++ GDG HF A +VAE+F GK +Q+HQ+VY AL M +HAL+++T PE Sbjct: 25 DLAGDGDHFAAEVVAESFRGKSRVQQHQMVYDALKGNMGGVLHALALQTSVPE 77