BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0074.p (606 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2928 [C] COG1290 Cytochrome b subunit of the bc complex Rso R... 644 0.0 PA4430 [C] COG1290 Cytochrome b subunit of the bc complex Pae Ps... 539 e-153 NMA0384 [C] COG1290 Cytochrome b subunit of the bc complex NmA N... 526 e-149 NMB2052 [C] COG1290 Cytochrome b subunit of the bc complex Nme N... 526 e-149 VC0574 [C] COG1290 Cytochrome b subunit of the bc complex Vch Vi... 451 e-126 XF0909 [C] COG1290 Cytochrome b subunit of the bc complex Xfa Xy... 387 e-107 SMc00188 [C] COG1290 Cytochrome b subunit of the bc complex Sme ... 342 1e-93 CC0473 [C] COG1290 Cytochrome b subunit of the bc complex Ccr Ca... 337 4e-92 AGc4073 [C] COG1290 Cytochrome b subunit of the bc complex Atu A... 336 9e-92 RC0359 Non COG 336 9e-92 >RSc2928 [C] COG1290 Cytochrome b subunit of the bc complex Rso Ralstonia solanacearum Length = 467 Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/456 (73%), Positives = 384/456 (84%), Gaps = 8/456 (1%) Query: 158 LNWVDSRFPLTATWKAHLSEYYAPKNFNFWYIFGSLALLVLVIQIVTGIFLVMHYKPDAT 217 L W+D+RFPLT TWKAHLSEYYAPKNFNFWY FGSLALLVLVIQIVTGIFLVM+YKPD T Sbjct: 13 LGWIDARFPLTETWKAHLSEYYAPKNFNFWYFFGSLALLVLVIQIVTGIFLVMNYKPDGT 72 Query: 218 L-------AFASVEYIMRDVPWGWLVRYMHSTGASAFFIVVYLHMVRGLLYGSYRKPREL 270 L A+ASVE+IMR+VPWGWLVRYMHSTGASAFFIVVYLHM RG+LYGSYRKPREL Sbjct: 73 LNAAGIPVAYASVEFIMREVPWGWLVRYMHSTGASAFFIVVYLHMFRGMLYGSYRKPREL 132 Query: 271 VWLFGVGIFLCLMGEAFFGYLLPWGQMSYWGAQVIVNLFGAIPFIGPDLSLWIRGDYVVS 330 VW+FG IFLCLM EAF GYLLPWGQMSYWGAQVIVNLF AIP IGPDLSLWIRGDYVVS Sbjct: 133 VWIFGCLIFLCLMAEAFMGYLLPWGQMSYWGAQVIVNLFSAIPLIGPDLSLWIRGDYVVS 192 Query: 331 DATLNRFFSFHVIAIPLVLIGLVVAHIIALHEVGSNNPDGVEIKEKTDEKGVPLDGVPFH 390 DATLNRFFSFHVIA+PLVL+GLVVAHIIALHEVGSNNPDGVEIK K DE+G+PLDG+PFH Sbjct: 193 DATLNRFFSFHVIAVPLVLLGLVVAHIIALHEVGSNNPDGVEIKAKKDERGIPLDGIPFH 252 Query: 391 PYYTVHDIFGVSIFLMVFSAVVFFAPEMGGYFLEYNNFIPADSLKTPPHIAPVWYFTPFY 450 PYY+VHDI GV++FL +FSA++FFAPEMGGYFLE NNFIPADSLKTPPHIAPVWYFTPFY Sbjct: 253 PYYSVHDIVGVAVFLFLFSAILFFAPEMGGYFLEANNFIPADSLKTPPHIAPVWYFTPFY 312 Query: 451 SILRATTADFMGWLIAGVAAYVALLVFKSRLSSKLKIAAIVIGLAIIGGMLIFDAKFWGV 510 S+LRATT+ F+ L +A + LL + + S K+K A+ + + + G DAKFWGV Sbjct: 313 SMLRATTSAFLPILWGFLAIMLGLLFVRCK-SMKIKGVAVAVAVILALGFAFIDAKFWGV 371 Query: 511 VLMGLSVVILGGLPWLDKSQVKSIRYRPSWHKYVYLVFGIAFVILGYLGVQPPTAIGTTV 570 V+MG SVVI +PWLD+S VKSIRYRP +HK + +F +AF +LGYLG+QPP+ G+ V Sbjct: 372 VVMGGSVVIFFFMPWLDQSPVKSIRYRPGFHKVLLGIFVVAFAVLGYLGIQPPSPAGSIV 431 Query: 571 SQVCSFIYLGFFLLMPWWSAAGTFKPVPDRVVYHPH 606 SQ+ + +Y FFL MP WS GTFKPVP+RV + PH Sbjct: 432 SQIGTIVYFAFFLAMPVWSRMGTFKPVPERVTFKPH 467 >PA4430 [C] COG1290 Cytochrome b subunit of the bc complex Pae Pseudomonas aeruginosa Length = 403 Score = 539 bits (1388), Expect = e-153, Method: Compositional matrix adjust. Identities = 269/446 (60%), Positives = 324/446 (72%), Gaps = 47/446 (10%) Query: 156 KALNWVDSRFPLTATWKAHLSEYYAPKNFNFWYIFGSLALLVLVIQIVTGIFLVMHYKPD 215 K + WVD+RFP T W+ HLS+YYAPKNFNFWY FGSLALLVLV QI+TGI+L M + P Sbjct: 3 KFMAWVDARFPATKMWEDHLSKYYAPKNFNFWYFFGSLALLVLVNQILTGIWLTMSFTPS 62 Query: 216 ATLAFASVEYIMRDVPWGWLVRYMHSTGASAFFIVVYLHMVRGLLYGSYRKPRELVWLFG 275 A AFASVEYIMRDV +GW++RYMHSTGASAFFIVVYLHM RGLLYGSY+KPRELVW+FG Sbjct: 63 AEEAFASVEYIMRDVDYGWIIRYMHSTGASAFFIVVYLHMFRGLLYGSYQKPRELVWIFG 122 Query: 276 VGIFLCLMGEAFFGYLLPWGQMSYWGAQVIVNLFGAIPFIGPDLSLWIRGDYVVSDATLN 335 + I+L LM EAF GYLLPWGQMSYWGAQVI++LFGAIP +G DL+ WIRGD+++S TLN Sbjct: 123 MLIYLALMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVVGEDLAQWIRGDFLISGITLN 182 Query: 336 RFFSFHVIAIPLVLIGLVVAHIIALHEVGSNNPDGVEIKEKTDEKGVPLDGVPFHPYYTV 395 RFF+ HVIA+P+VL+GLVV HI+ALHEVGSNNPDGV+IK+K DE GVPLDG+ FHPYYTV Sbjct: 183 RFFALHVIALPIVLLGLVVLHILALHEVGSNNPDGVDIKKKKDENGVPLDGIAFHPYYTV 242 Query: 396 HDIFGVSIFLMVFSAVVFFAPEMGGYFLEYNNFIPADSLKTPPHIAPVWYFTPFYSILRA 455 DI GV +FL +F V+FF PEMGGYFLE NF A+ KTP HIAPVWYFTPFY+ILRA Sbjct: 243 KDIVGVVVFLFIFCTVIFFFPEMGGYFLEKPNFEMANQFKTPEHIAPVWYFTPFYAILRA 302 Query: 456 TTADFMGWLIAGVAAYVALLVFKSRLSSKLKIAAIVIGLAIIGGMLIFDAKFWGVVLMGL 515 MG VV MG Sbjct: 303 VPDKLMG-----------------------------------------------VVAMGA 315 Query: 516 SVVILGGLPWLDKSQVKSIRYRPSWHKYVYLVFGIAFVILGYLGVQPPTAIGTTVSQVCS 575 ++ +L LPWLD+S V+SIRY+ K ++F ++FVILGY G Q P+ +GTT+S+VC+ Sbjct: 316 AIAVLFVLPWLDRSPVRSIRYKGWLSKLWLVIFAVSFVILGYYGAQAPSPLGTTLSRVCT 375 Query: 576 FIYLGFFLLMPWWSAAGTFKPVPDRV 601 +Y FF+LMP+++ KPVP+RV Sbjct: 376 VLYFAFFILMPFYTRMEKTKPVPERV 401 >NMA0384 [C] COG1290 Cytochrome b subunit of the bc complex NmA Neisseria meningitidis Z2491 Length = 449 Score = 526 bits (1355), Expect = e-149, Method: Compositional matrix adjust. Identities = 279/464 (60%), Positives = 332/464 (71%), Gaps = 51/464 (10%) Query: 147 LPDDAPVSAKAL-NWVDSRFPLTATWKAHLSEYYAPKNFNFWYIFGSLALLVLVIQIVTG 205 + + AKAL W+D+RFPL+ W HL++YYAPKNFNFWY FGSLALLVLVIQIV+G Sbjct: 1 MANQTNSKAKALLGWMDARFPLSKMWNEHLAQYYAPKNFNFWYYFGSLALLVLVIQIVSG 60 Query: 206 IFLVMHYKPDATL-------AFASVEYIMRDVPWGWLVRYMHSTGASAFFIVVYLHMVRG 258 IFL M+YKPD L AF +VEYIMRDV GW++RYMHSTGAS FFIVVYLHM RG Sbjct: 61 IFLTMNYKPDGNLNAYHLPAAFTAVEYIMRDVSGGWIIRYMHSTGASFFFIVVYLHMFRG 120 Query: 259 LLYGSYRKPRELVWLFGVGIFLCLMGEAFFGYLLPWGQMSYWGAQVIVNLFGAIPFIGPD 318 L+YGSY+KPRELVW+FG IFL LM EAF GYLLPWGQMS+WGAQVI+NLF AIP IGPD Sbjct: 121 LIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMSFWGAQVIINLFSAIPVIGPD 180 Query: 319 LSLWIRGDYVVSDATLNRFFSFHVIAIPLVLIGLVVAHIIALHEVGSNNPDGVEIKEKTD 378 LS WIRGD+ VSD TLNRFF+ HVIA+PLVL+GLVVAHIIALHEVGSNNPDGVEIK+ D Sbjct: 181 LSTWIRGDFNVSDVTLNRFFALHVIAVPLVLLGLVVAHIIALHEVGSNNPDGVEIKKNKD 240 Query: 379 EKGVPLDGVPFHPYYTVHDIFGVSIFLMVFSAVVFFAPEMGGYFLEYNNFIPADSLKTPP 438 E G+P DG+PFHPYYTV D+ GV +FL+VF AV+FFAPE GGYFLE NF A++LKTPP Sbjct: 241 ENGIPRDGIPFHPYYTVKDVLGVVVFLIVFCAVLFFAPEGGGYFLEAPNFDAANALKTPP 300 Query: 439 HIAPVWYFTPFYSILRATTADFMGWLIAGVAAYVALLVFKSRLSSKLKIAAIVIGLAIIG 498 HIAPVWYFTPFY+ILRA + F+G Sbjct: 301 HIAPVWYFTPFYAILRAIPS-FLG------------------------------------ 323 Query: 499 GMLIFDAKFWGVVLMGLSVVILGGLPWLDKSQVKSIRYRPSWHKYVYLVFGIAFVILGYL 558 + WGV+ MG +VV++ LPWLD+ +VKS+RYR K ++F I+F+ LG L Sbjct: 324 ------TQVWGVIGMGAAVVLIALLPWLDRGEVKSVRYRGPIFKTALVLFIISFIGLGIL 377 Query: 559 GVQPPTAIGTTVSQVCSFIYLGFFLLMPWWSAAGTFKPVPDRVV 602 G T T V+++ SF+Y FFL MP+++ KPVP+RV Sbjct: 378 GAMVATDTRTLVARILSFVYFAFFLGMPFYTKLDKNKPVPERVT 421 >NMB2052 [C] COG1290 Cytochrome b subunit of the bc complex Nme Neisseria meningitidis MC58 Length = 449 Score = 526 bits (1354), Expect = e-149, Method: Compositional matrix adjust. Identities = 286/463 (61%), Positives = 333/463 (71%), Gaps = 51/463 (11%) Query: 147 LPDDAPVSAKAL-NWVDSRFPLTATWKAHLSEYYAPKNFNFWYIFGSLALLVLVIQIVTG 205 + + AKAL WVD+RFPL+ WK HLSEYYAPKNFNFWY FGSL++LVLVIQIV+G Sbjct: 1 MANQTNSKAKALLGWVDARFPLSKMWKEHLSEYYAPKNFNFWYFFGSLSMLVLVIQIVSG 60 Query: 206 IFLVMHYKPDATL-------AFASVEYIMRDVPWGWLVRYMHSTGASAFFIVVYLHMVRG 258 IFL M+YKPD L AF +VEYIMRDV GW++RYMHSTGAS FFIVVYLHM RG Sbjct: 61 IFLTMNYKPDGNLNAYHLPAAFTAVEYIMRDVSGGWIIRYMHSTGASFFFIVVYLHMFRG 120 Query: 259 LLYGSYRKPRELVWLFGVGIFLCLMGEAFFGYLLPWGQMSYWGAQVIVNLFGAIPFIGPD 318 L+YGSY+KPRELVW+FG IFL LM EAF GYLLPWGQMS+WGAQVI+NLF AIP IGPD Sbjct: 121 LIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMSFWGAQVIINLFSAIPVIGPD 180 Query: 319 LSLWIRGDYVVSDATLNRFFSFHVIAIPLVLIGLVVAHIIALHEVGSNNPDGVEIKEKTD 378 LS WIRGD+ VSD TLNRFF+ HVIA+PLVL+GLVVAHIIALHEVGSNNPDGVEIK+ D Sbjct: 181 LSTWIRGDFNVSDVTLNRFFALHVIAVPLVLLGLVVAHIIALHEVGSNNPDGVEIKKLKD 240 Query: 379 EKGVPLDGVPFHPYYTVHDIFGVSIFLMVFSAVVFFAPEMGGYFLEYNNFIPADSLKTPP 438 E GVPLDG+PF PYY VHDI V+IFL+VF AV+FFAPE GGYFLE NF A++LKTPP Sbjct: 241 ENGVPLDGIPFFPYYVVHDILAVTIFLIVFCAVMFFAPEGGGYFLEAPNFDAANALKTPP 300 Query: 439 HIAPVWYFTPFYSILRATTADFMGWLIAGVAAYVALLVFKSRLSSKLKIAAIVIGLAIIG 498 HIAPVWYFTPFY+ILRA + F G + G VIG+ Sbjct: 301 HIAPVWYFTPFYAILRAIPS-FAGTQVWG-----------------------VIGM---- 332 Query: 499 GMLIFDAKFWGVVLMGLSVVILGGLPWLDKSQVKSIRYRPSWHKYVYLVFGIAFVILGYL 558 G +VV++ LPWLDK +VKS+RYR K ++F IAF+ LG L Sbjct: 333 ---------------GAAVVLIALLPWLDKGEVKSVRYRGPIFKTALVLFIIAFIGLGIL 377 Query: 559 GVQPPTAIGTTVSQVCSFIYLGFFLLMPWWSAAGTFKPVPDRV 601 G T T V+++ SF+Y FFL MP+++ T KPVP+RV Sbjct: 378 GAMVATDTRTLVARILSFVYFAFFLGMPFYTKLDTNKPVPERV 420 >VC0574 [C] COG1290 Cytochrome b subunit of the bc complex Vch Vibrio cholerae Length = 421 Score = 451 bits (1159), Expect = e-126, Method: Compositional matrix adjust. Identities = 250/463 (53%), Positives = 308/463 (66%), Gaps = 64/463 (13%) Query: 158 LNWVDSRFPLTATWKAHLSEYYAPKNFNFWYIFGSLALLVLVIQIVTGIFLVMHYKPDAT 217 L+WV+ R P +K HLSEY PKNFNFWY+FGSLA+LVLV Q++TGI+L M+Y P Sbjct: 5 LDWVEKRLPAMNAYKKHLSEYPMPKNFNFWYLFGSLAMLVLVNQLLTGIWLTMNYVPSGE 64 Query: 218 LAFASVEYIMRDVPWGWLVRYMHSTGASAFFIVVYLHMVRGLLYGSYRKPRELVWLFGVG 277 AFAS+EYIMRDV +GWL+RYMHSTGASAFF+VVYLHM RGL+YGSY+KPREL+W+FG+ Sbjct: 65 GAFASIEYIMRDVEYGWLLRYMHSTGASAFFVVVYLHMFRGLIYGSYQKPRELLWIFGML 124 Query: 278 IFLCLMGEAFFGYLLPWGQMSYWGAQVIVNLFGAIPFIGPDLSLWIRGDYVVSDATLNRF 337 IFL LM EAF GYLLPWGQMSYWGAQVI++LFGAIP IG DL+LWIRGDYV+S ATLNRF Sbjct: 125 IFLVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTLWIRGDYVISGATLNRF 184 Query: 338 FSFHVIAIPLVLIGLVVAHIIALHEVGSNNPDGVEIK-----------------EKTDEK 380 F+ HVIA+P+VL+ L+V HI+ALHEVGSNNPDG+E K E +K Sbjct: 185 FALHVIALPIVLLLLIVLHILALHEVGSNNPDGIETKLPKGSMGEGYESQFKFHEYYTKK 244 Query: 381 GVPLDGVPFHPYYTVHDIFGVSIFLMVFSAVVFFAPEMGGYFLEYNNFIPADSLKTPPHI 440 +D +PFHPY TV D+ GV+ FL +F V+FF PEMGGYFLE NF A+ LKTP HI Sbjct: 245 YDIIDSIPFHPYGTVKDLIGVAGFLFLFCYVLFFNPEMGGYFLEPPNFEAANPLKTPEHI 304 Query: 441 APVWYFTPFYSILRATTADFMGWLIAGVAAYVALLVFKSRLSSKLKIAAIVIGLAIIGGM 500 APVWYFTPFY+ILRA +G Sbjct: 305 APVWYFTPFYAILRAVPDKLLG-------------------------------------- 326 Query: 501 LIFDAKFWGVVLMGLSVVILGGLPWLDKSQVKSIRYRPSWHKYVYLVFGIAFVILGYLGV 560 V+ MG S+V+L LPWLD+ +V+S RYR +H + F ++F+ LG LG Sbjct: 327 ---------VIAMGASIVVLFLLPWLDRCKVRSYRYRSKFHLFNIAQFTVSFIALGILGA 377 Query: 561 QPPTAIGTTVSQVCSFIYLGFFLLMPWWSAAGTFKPVPDRVVY 603 P T T ++Q+ S Y FF+L+ ++S KP+P RV Y Sbjct: 378 LPATPTYTLLAQIFSLCYFMFFVLLFFYSKNEATKPLPTRVTY 420 >XF0909 [C] COG1290 Cytochrome b subunit of the bc complex Xfa Xylella fastidiosa 9a5c Length = 420 Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust. Identities = 217/453 (47%), Positives = 283/453 (62%), Gaps = 54/453 (11%) Query: 159 NWVDSRFP-LTATWKAHLSEYYAPKNFNFWYIFGSLALLVLVIQIVTGIFLVMHYKPDAT 217 +WV R P L ++ H +EYY PKN N WY FGSL L+VLV Q+VTGIFL MHYKP Sbjct: 14 DWVGVRVPGLVLFYRNHFTEYYVPKNLNVWYCFGSLLLVVLVNQVVTGIFLAMHYKPSVA 73 Query: 218 LAFASVEY-IMRDVPWGWLVRYMHSTGASAFFIVVYLHMVRGLLYGSYRKPRELVWLFGV 276 AF S+E IMRDV WGWL+RYMHSTGAS FFI VYLHM RGL+YGS +KPRELVW+ G+ Sbjct: 74 EAFQSIEMTIMRDVEWGWLIRYMHSTGASLFFIGVYLHMFRGLIYGSGKKPRELVWVLGM 133 Query: 277 GIFLCLMGEAFFGYLLPWGQMSYWGAQVIVNLFGAIPFIGPDLSLWIRGDYVVSDATLNR 336 +++ LM EAF GY+LPWGQ+S+WGA+VI++LFGAIP IG L WI GDY+ SD TLNR Sbjct: 134 LMYVVLMVEAFVGYVLPWGQVSFWGAKVIISLFGAIPVIGNGLDEWIMGDYLPSDVTLNR 193 Query: 337 FFSFHVIAIPLVLIGLVVAHIIALHEVGSNNPDGVEI----KEKTDEKGVPLDGVPFHPY 392 FF+ HVIA+PL+L LVV H++AL VGSNNPDG++I K + D +PFHPY Sbjct: 194 FFALHVIALPLLLGFLVVLHLVALRGVGSNNPDGIDIHQGPKGNRWDSMQSADSIPFHPY 253 Query: 393 YTVHDIFGVSIFLMVFSAVVFFAPEMGGYFLEYNNFIPADSLKTPPHIAPVWYFTPFYSI 452 YT+ ++ V + L++ + V+FFAPE GG FLEY NF+ A+ L TP + PVWYF P+Y++ Sbjct: 254 YTLKEMVAVCVLLLLAAFVIFFAPEFGGLFLEYGNFVEANPLMTPEDMKPVWYFAPYYAM 313 Query: 453 LRATTADFMGWLIAGVAAYVALLVFKSRLSSKLKIAAIVIGLAIIGGMLIFDAKFWGVVL 512 LR +G V++ Sbjct: 314 LRLVPGKSVG-----------------------------------------------VLV 326 Query: 513 MGLSVVILGGLPWLDKSQVKSIRYRPSWHKYVYLVFGIAFVILGYLGVQPPTAIGTT-VS 571 M ++ IL +PWLD+ +V SIRYR + + VF + V L +G+ P TA+ V Sbjct: 327 MFSAIAILFLVPWLDRGKVYSIRYRGWIARIAFGVFVVCLVWLAVIGLGPGTAVWEIYVG 386 Query: 572 QVCSFIYLGFFLLMPWWSAAGTFKPVPDRVVYH 604 +V F+Y FF+ MP W+ + KPVP+R+ H Sbjct: 387 RVLIFLYFAFFITMPLWTVVASMKPVPERLTSH 419 >SMc00188 [C] COG1290 Cytochrome b subunit of the bc complex Sme Sinorhizobium meliloti Length = 426 Score = 342 bits (878), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 190/445 (42%), Positives = 264/445 (59%), Gaps = 53/445 (11%) Query: 159 NWVDSRFPLTATWKAHLSEYYAPKNFNFWYIFGSLALLVLVIQIVTGIFLVMHYKPDATL 218 WVDSR PL Y P+N N+ Y FG++ ++L++QI+TGI L MHY + ++ Sbjct: 16 KWVDSRLPLPRLVHDSFVSYPVPRNLNYAYTFGAMLSVMLIVQILTGIVLAMHYAAETSV 75 Query: 219 AFASVEYIMRDVPWGWLVRYMHSTGASAFFIVVYLHMVRGLLYGSYRKPRELVWLFGVGI 278 AF SVE IMRDV GWL+RY+H+ GAS FFI VYLH+ RGL YGSY+ PRE++W+ GV I Sbjct: 76 AFNSVEKIMRDVNHGWLLRYLHANGASFFFIAVYLHIARGLYYGSYKAPREILWILGVVI 135 Query: 279 FLCLMGEAFFGYLLPWGQMSYWGAQVIVNLFGAIPFIGPDLSLWIRGDYVVSDATLNRFF 338 +L +M F GY+LPWGQMS+WGA VI F A P +G + ++ G + V TLNRFF Sbjct: 136 YLLMMATGFMGYVLPWGQMSFWGATVITGFFSAFPLVGEWIQQFLLGGFAVDQPTLNRFF 195 Query: 339 SFHVIAIPLVLIGLVVAHIIALHEVGSNNPDGVEIKEKTDEKGVPLDGVPFHPYYTVHDI 398 S H + +P ++ G+VV HI ALH G NP GVE+K K+D VPF PY T+ D Sbjct: 196 SLHYL-LPFMIAGVVVLHIWALHVTGQTNPTGVEVKSKSDT-------VPFTPYATLKDA 247 Query: 399 FGVSIFLMVFSAVVFFAPEMGGYFLEYNNFIPADSLKTPPHIAPVWYFTPFYSILRATTA 458 GVS+FL+V++ VF+ P G+ +N+IPAD+LKTP HI P WY+ PFY++LRA T Sbjct: 248 LGVSVFLIVYAWFVFYMPNFLGH---PDNYIPADALKTPAHIVPEWYYLPFYAMLRAITF 304 Query: 459 DFMGWLIAGVAAYVALLVFKSRLSSKLKIAAIVIGLAIIGGMLIFDAKFWGVVLMGLSVV 518 + +G + D+K GV++M S++ Sbjct: 305 N-------------------------------------VGPI---DSKLGGVLVMFGSIL 324 Query: 519 ILGGLPWLDKSQVKSIRYRPSWHKYVYLVFGIAFVILGYLGVQPPTAIGTTVSQVCSFIY 578 IL LPWLD S+V+S YRP W+K + +F ++LG+LG +P + +SQ+ + Y Sbjct: 325 ILFFLPWLDTSKVRSAVYRP-WYKLFFWIFVADCILLGWLGSRPAEGLYVVMSQLGTLYY 383 Query: 579 LGFFL-LMPWWSAAGTFKPVPDRVV 602 FFL +MP T K +P+ + Sbjct: 384 FAFFLVIMPILGLIETPKRIPNSIT 408 >CC0473 [C] COG1290 Cytochrome b subunit of the bc complex Ccr Caulobacter vibrioides Length = 426 Score = 337 bits (865), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 195/460 (42%), Positives = 260/460 (56%), Gaps = 77/460 (16%) Query: 160 WVDSRFPLTATWKAHLSEYYAPKNFNFWYIFGSLALLVLVIQIVTGIFLVMHYKPDATLA 219 W+D+R P+ +Y P+N N+W+ FG + L L Q++TGI LVMHY P A A Sbjct: 16 WLDARLPIIRLGYDSFVDYPTPRNLNYWWTFGGILSLCLASQLITGIILVMHYTPSADHA 75 Query: 220 FASVEYIMRDVPWGWLVRYMHSTGASAFFIVVYLHMVRGLLYGSYRKPRELVWLFGVGIF 279 FASVE+IMRDV +GWL+RYMHS GAS FFI VY+HM+RGL YGSY+ PRE++WL G I+ Sbjct: 76 FASVEHIMRDVNYGWLIRYMHSNGASMFFIAVYIHMMRGLYYGSYKAPREVLWLLGCVIY 135 Query: 280 LCLMGEAFFGYLLPWGQMSYWGAQVIVNLFGAIPFIGPDLSLWIRGDYVVSDATLNRFFS 339 L +M AF GY+LPWGQMS+ GA VI NLFGA+P +G ++ W+ G + V +ATLNRFFS Sbjct: 136 LLMMATAFMGYVLPWGQMSFHGAVVITNLFGALPIVGESITTWLWGGFAVDNATLNRFFS 195 Query: 340 FHVIAIPLVLIGLVVAHIIALHEVGSNNPDGVEIKEKTDEKGVPLDGVPFHPYYTVHDIF 399 H + +P ++ G+V+ HI ALH VG NNP GVE K K D VPF PY TV D F Sbjct: 196 LHYL-LPFMIAGVVILHIWALHVVGQNNPTGVEPKSKADT-------VPFTPYATVKDGF 247 Query: 400 GVSIFLMVFSAVVFFAPEMGGYFLEYNNFIPADSLKTPPHIAPVWYFTPFYSILRATTAD 459 +S+F+++F+ VFF P G+ +N+I A+ L TP HI P WYF PFY+ILRA Sbjct: 248 AMSVFMILFAYFVFFMPNALGH---PDNYIEANPLVTPAHIVPEWYFLPFYAILRAVPDK 304 Query: 460 FMGWLIAGVAAYVALLVFKSRLSSKLKIAAIVIGLAIIGGMLIFDAKFWGVVLMGLSVVI 519 M GV+ M ++ Sbjct: 305 LM-----------------------------------------------GVLAMFGAIGC 317 Query: 520 LGGLPWLDKSQVKSIRYRPSWHKYVYLVFGIAFVILGYLGVQPP---------------T 564 L LPWLD S+V+S+RYRP+ Y +++F +A ILG G + P Sbjct: 318 LFALPWLDTSKVRSMRYRPTAKVY-FMIFVVACCILGLCGAKLPDDKVIPHLTTFKLIDA 376 Query: 565 AIGTTV--SQVCSFIYLGFFL-LMPWWSAAGTFKPVPDRV 601 + + V S+V S Y FFL ++P PVP+ + Sbjct: 377 DLNSFVWLSRVASLYYFAFFLVILPILGLKEKPLPVPESI 416 >AGc4073 [C] COG1290 Cytochrome b subunit of the bc complex Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 427 Score = 336 bits (862), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 183/443 (41%), Positives = 263/443 (59%), Gaps = 53/443 (11%) Query: 160 WVDSRFPLTATWKAHLSEYYAPKNFNFWYIFGSLALLVLVIQIVTGIFLVMHYKPDATLA 219 W+DSR PL Y P+N N+ Y FG++ ++L++QI+TG+ L MHY + T+A Sbjct: 16 WIDSRLPLPRMIYDSFVAYPVPRNLNYAYTFGAMLAVMLIVQILTGVVLAMHYAAETTVA 75 Query: 220 FASVEYIMRDVPWGWLVRYMHSTGASAFFIVVYLHMVRGLLYGSYRKPRELVWLFGVGIF 279 F SVE IMRDV GWL+RYMH+ GAS FFI VYLH+ RGL YGSY+ PRE++W+ G I+ Sbjct: 76 FNSVEKIMRDVNHGWLLRYMHANGASFFFIAVYLHIARGLYYGSYKAPREILWILGCVIY 135 Query: 280 LCLMGEAFFGYLLPWGQMSYWGAQVIVNLFGAIPFIGPDLSLWIRGDYVVSDATLNRFFS 339 L +M F GY+LPWGQMS+WGA VI F A P +G + ++ G + V + TLNRFF+ Sbjct: 136 LLMMATGFMGYVLPWGQMSFWGATVITGFFTAFPLVGEWIQQFLLGGFAVDNPTLNRFFA 195 Query: 340 FHVIAIPLVLIGLVVAHIIALHEVGSNNPDGVEIKEKTDEKGVPLDGVPFHPYYTVHDIF 399 H + +P ++ G+V+ HI ALH G NP GVE+K KTD VPF PY T+ D Sbjct: 196 LHYL-LPFMIAGVVILHIWALHVTGQTNPTGVEVKSKTDT-------VPFTPYATLKDAL 247 Query: 400 GVSIFLMVFSAVVFFAPEMGGYFLEYNNFIPADSLKTPPHIAPVWYFTPFYSILRATTAD 459 GVS+FL+ ++ +F+ P G+ +N+I AD LKTP HI P WY+ PFY++LRA T + Sbjct: 248 GVSVFLIAYAWFIFYMPNFLGH---PDNYIMADPLKTPAHIVPEWYYLPFYAMLRAITFN 304 Query: 460 FMGWLIAGVAAYVALLVFKSRLSSKLKIAAIVIGLAIIGGMLIFDAKFWGVVLMGLSVVI 519 +G + D+K GV++M ++++ Sbjct: 305 -------------------------------------VGPI---DSKLGGVLVMFGAIIV 324 Query: 520 LGGLPWLDKSQVKSIRYRPSWHKYVYLVFGIAFVILGYLGVQPPTAIGTTVSQVCSFIYL 579 L LPWLD S+V+S YRP W+K + +F + ++LG+LG +P + +SQ+ + Y Sbjct: 325 LFFLPWLDTSKVRSAVYRP-WYKMFFWLFVVNAILLGWLGSRPAEGLYVVMSQIGTLYYF 383 Query: 580 GFFL-LMPWWSAAGTFKPVPDRV 601 GFFL +MP T + +P+ + Sbjct: 384 GFFLVIMPILGLVETPRRIPNSI 406 >RC0359 Non COG Length = 398 Score = 336 bits (862), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 189/432 (43%), Positives = 252/432 (58%), Gaps = 61/432 (14%) Query: 149 DDAPVSAKAL-NWVDSRFPLTATWKAHLSEYYAPKNFNFWYIFGSLALLVLVIQIVTGIF 207 D P A+ W+D R P+ A K H S Y PKN N+ + GS+A + LVIQI+TG+ Sbjct: 4 DITPKKPNAIIEWIDYRLPIFAFLK-HFSHYQTPKNLNYLWNLGSIAGIALVIQIITGVI 62 Query: 208 LVMHYKPDATLAFASVEYIMRDVPWGWLVRYMHSTGASAFFIVVYLHMVRGLLYGSYRKP 267 L MHY P AF SVE IMR+V +GWL+RY H+ GAS FF VYLH+ RGL YGSY+ P Sbjct: 63 LAMHYTPHVDHAFDSVERIMRNVNYGWLLRYTHAVGASMFFAAVYLHIARGLYYGSYKAP 122 Query: 268 RELVWLFGVGIFLCLMGEAFFGYLLPWGQMSYWGAQVIVNLFGAIPFIGPDLSLWIRGDY 327 REL+W G+ IFL +M AF GY+LPWGQMSYWGA VI NLF AIP IG + W+ G + Sbjct: 123 RELLWHIGIIIFLTMMATAFMGYVLPWGQMSYWGATVITNLFSAIPLIGEFIVTWLWGGF 182 Query: 328 VVSDATLNRFFSFHVIAIPLVLIGLVVAHIIALHEVGSNNPDGVEIKEKTDEKGVPLDGV 387 V + TLNRFFS H + +P +++ LV+ H++ALH+ GSNNP G+++K P D + Sbjct: 183 SVDNPTLNRFFSLHYL-LPFIIVALVMLHLVALHQHGSNNPKGIDVKS-------PKDTI 234 Query: 388 PFHPYYTVHDIFGVSIFLMVFSAVVFFAPEMGGYFLEYNNFIPADSLKTPPHIAPVWYFT 447 PFHPYYTV D G ++ ++F+ +F+ P G+ +N+IPA+ L TP HI P WYF Sbjct: 235 PFHPYYTVKDFVGFGVYFIIFAYFIFYEPNYLGH---PDNYIPANPLVTPAHIVPEWYFL 291 Query: 448 PFYSILRATTADFMGWLIAGVAAYVALLVFKSRLSSKLKIAAIVIGLAIIGGMLIFDAKF 507 PFY+ILRA + SKL Sbjct: 292 PFYAILRA-------------------------MPSKLG--------------------- 305 Query: 508 WGVVLMGLSVVILGGLPWLDKSQVKSIRYRPSWHKYVYLVFGIAFVILGYLGVQPPTAIG 567 GV+LM S+ +L LPWLD S+V+S YRP ++ + +F ++LGYLG QP Sbjct: 306 -GVLLMFGSIFVLFLLPWLDTSKVRSSNYRPI-YRMAFWIFMADCLLLGYLGGQPAEEPY 363 Query: 568 TTVSQVCSFIYL 579 T+S+ + Y Sbjct: 364 ITISRFAACYYF 375