BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0043.p (243 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2254 [I] COG1788 Acyl CoA Rso Ralstonia solanacearum 370 e-102 AGl1055GM [I] COG1788 Acyl CoA Atu Agrobacterium tumefaciens str... 266 4e-71 jhp0637 [I] COG1788 Acyl CoA jHp Helicobacter pylori J99 227 2e-59 BS_yxjD [I] COG1788 Acyl CoA Bsu Bacillus subtilis 226 5e-59 HP0691 [I] COG1788 Acyl CoA Hpy Helicobacter pylori 26695 224 1e-58 CC0206 [I] COG1788 Acyl CoA Ccr Caulobacter vibrioides 223 2e-58 RSc1570 [I] COG1788 Acyl CoA Rso Ralstonia solanacearum 221 1e-57 DRA0068 [I] COG1788 Acyl CoA Dra Deinococcus radiodurans 216 5e-56 PA1999 [I] COG1788 Acyl CoA Pae Pseudomonas aeruginosa 211 1e-54 CC2405 [I] COG1788 Acyl CoA Ccr Caulobacter vibrioides 202 6e-52 >RSc2254 [I] COG1788 Acyl CoA Rso Ralstonia solanacearum Length = 229 Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust. Identities = 179/224 (79%), Positives = 197/224 (87%) Query: 20 VINKISDSLEQAVADIHDGATIMIGGFGNAGMPSALIDALIAQGARDLTIVNNNAGNGET 79 +INKI S+E A+ADI DGATIMIGGFG AGMP+ALID LIA GAR+LTI+NNNAGNGET Sbjct: 1 MINKICLSVEAALADIPDGATIMIGGFGTAGMPAALIDGLIAHGARELTIINNNAGNGET 60 Query: 80 GLAALLKTKRVKKIVCSFPRQSDSQVFDALYRSGEIELELTPQGNLAERIRAAGAGIGGF 139 GLAALLK +RV+KIVCSFPRQSDS VFDALYR+GEIELEL PQGNLAERIRAAGAGIGGF Sbjct: 61 GLAALLKARRVRKIVCSFPRQSDSYVFDALYRAGEIELELVPQGNLAERIRAAGAGIGGF 120 Query: 140 FSPTGYGTMLAEGKDTREINGRHYVLESPIHADFALIKALRGDRWGNLVYRKTARNFGPI 199 F PT YGT LAEGK+TR I+G+ YV E P+ AD+ALIKALRGDRWGNLVYRKTARNFGP+ Sbjct: 121 FCPTAYGTQLAEGKETRIIDGKPYVFELPLTADYALIKALRGDRWGNLVYRKTARNFGPV 180 Query: 200 MAMAAKCTIAQVSEVVELGQLDPENIVTPGIFVQRIVQTKEAQQ 243 MAMAAKCTIA+V VELG LDPE+IVTPGIFV+RIV A Q Sbjct: 181 MAMAAKCTIAEVDATVELGALDPEHIVTPGIFVKRIVPVGAAAQ 224 >AGl1055GM [I] COG1788 Acyl CoA Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 235 Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 128/223 (57%), Positives = 163/223 (73%) Query: 21 INKISDSLEQAVADIHDGATIMIGGFGNAGMPSALIDALIAQGARDLTIVNNNAGNGETG 80 ++K S E+A++ I DGATIMIGGFG +G P LI ALI +G ++LT++NNNAGNG G Sbjct: 1 MDKTIKSAEEALSSIGDGATIMIGGFGGSGAPIELIHALIDKGPKNLTVINNNAGNGRIG 60 Query: 81 LAALLKTKRVKKIVCSFPRQSDSQVFDALYRSGEIELELTPQGNLAERIRAAGAGIGGFF 140 +AA++ VKK++CSFPR SD + F Y +GEIELEL PQG LAERIRA GAGI F+ Sbjct: 61 IAAMIDAGMVKKMICSFPRSSDPRAFTDRYLAGEIELELVPQGTLAERIRAGGAGIPAFY 120 Query: 141 SPTGYGTMLAEGKDTREINGRHYVLESPIHADFALIKALRGDRWGNLVYRKTARNFGPIM 200 +PTG+GT LA GK E +GR YV E + ADFA++KA GD +GNL Y K RNF P+M Sbjct: 121 TPTGFGTELANGKVIAEFDGRSYVQERWLKADFAIVKAELGDTYGNLTYNKAGRNFNPLM 180 Query: 201 AMAAKCTIAQVSEVVELGQLDPENIVTPGIFVQRIVQTKEAQQ 243 MAAK TIAQVS +V G++DPE++VTPGIFV +V+ + QQ Sbjct: 181 CMAAKTTIAQVSRIVAAGEIDPEHVVTPGIFVNGVVEIPDPQQ 223 >jhp0637 [I] COG1788 Acyl CoA jHp Helicobacter pylori J99 Length = 232 Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 105/223 (47%), Positives = 160/223 (71%), Gaps = 2/223 (0%) Query: 21 INKISDSLEQAVADIHDGATIMIGGFGNAGMPSALIDALIAQGARDLTIVNNNAGNGETG 80 +NK+ L++A++ + DG TI++GGFG G+P ID + +G +DL +V+NN G + G Sbjct: 1 MNKVITDLDKALSGLKDGDTILVGGFGLCGIPEYAIDYIYKKGIKDLIVVSNNCGVDDFG 60 Query: 81 LAALLKTKRVKKIVCSFPRQSDSQVFDALYRSGEIELELTPQGNLAERIRAAGAGIGGFF 140 L LL+ K++KKI+ S+ ++++F++ +GEIE+ LTPQG LAE +RA GAGI ++ Sbjct: 61 LGILLEKKQIKKIIASY--VGENKIFESQMLNGEIEVVLTPQGTLAENLRAGGAGIPAYY 118 Query: 141 SPTGYGTMLAEGKDTREINGRHYVLESPIHADFALIKALRGDRWGNLVYRKTARNFGPIM 200 +PTG GT++A+GK++RE NG+ Y+LE I D+ LIKA + D GNLV+RKTARNF P+ Sbjct: 119 TPTGVGTLIAQGKESREFNGKEYILERAITGDYGLIKAYKSDTLGNLVFRKTARNFNPLC 178 Query: 201 AMAAKCTIAQVSEVVELGQLDPENIVTPGIFVQRIVQTKEAQQ 243 AMAAK +A+V E+V G+LDP+ I PGI+VQ I + ++ ++ Sbjct: 179 AMAAKICVAEVEEIVPAGELDPDEIHLPGIYVQHIYKGEKFEK 221 >BS_yxjD [I] COG1788 Acyl CoA Bsu Bacillus subtilis Length = 238 Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 110/216 (50%), Positives = 153/216 (70%), Gaps = 2/216 (0%) Query: 21 INKISDSLEQAVADIHDGATIMIGGFGNAGMPSALIDALIAQGARDLTIVNNNAGNGETG 80 + K+ S ++A IHDG T++ GGFG G+P LI ++ QG +DLT+V+NN G + G Sbjct: 1 MGKVLSSSKEAAKLIHDGDTLIAGGFGLCGIPEQLILSIRDQGVKDLTVVSNNCGVDDWG 60 Query: 81 LAALLKTKRVKKIVCSFPRQSDSQVFDALYRSGEIELELTPQGNLAERIRAAGAGIGGFF 140 L LL K++KK++ S+ ++++F+ + SGE+E+EL PQG LAERIRA GAGI GF+ Sbjct: 61 LGLLLANKQIKKMIASYV--GENKIFERQFLSGELEVELVPQGTLAERIRAGGAGIPGFY 118 Query: 141 SPTGYGTMLAEGKDTREINGRHYVLESPIHADFALIKALRGDRWGNLVYRKTARNFGPIM 200 + TG GT +AEGK+ + GR YVLE I D A++KA + D GNL++RKTARNF PI Sbjct: 119 TATGVGTSIAEGKEHKTFGGRTYVLERGITGDVAIVKAWKADTMGNLIFRKTARNFNPIA 178 Query: 201 AMAAKCTIAQVSEVVELGQLDPENIVTPGIFVQRIV 236 AMA K TIA+ E+VE G+LDP++I TPGI+VQ +V Sbjct: 179 AMAGKITIAEAEEIVEAGELDPDHIHTPGIYVQHVV 214 >HP0691 [I] COG1788 Acyl CoA Hpy Helicobacter pylori 26695 Length = 232 Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 104/223 (46%), Positives = 159/223 (71%), Gaps = 2/223 (0%) Query: 21 INKISDSLEQAVADIHDGATIMIGGFGNAGMPSALIDALIAQGARDLTIVNNNAGNGETG 80 +NK+ L++A++ + DG TI++GGFG G+P ID + +G +DL +V+NN G + G Sbjct: 1 MNKVITDLDKALSALKDGDTILVGGFGLCGIPEYAIDYIYKKGIKDLIVVSNNCGVDDFG 60 Query: 81 LAALLKTKRVKKIVCSFPRQSDSQVFDALYRSGEIELELTPQGNLAERIRAAGAGIGGFF 140 L LL+ K++KKI+ S+ ++++F++ +GEIE+ LTPQG LAE + A GAGI ++ Sbjct: 61 LGILLEKKQIKKIIASY--VGENKIFESQMLNGEIEVVLTPQGTLAENLHAGGAGIPAYY 118 Query: 141 SPTGYGTMLAEGKDTREINGRHYVLESPIHADFALIKALRGDRWGNLVYRKTARNFGPIM 200 +PTG GT++A+GK++RE NG+ Y+LE I D+ LIKA + D GNLV+RKTARNF P+ Sbjct: 119 TPTGVGTLIAQGKESREFNGKEYILERAITGDYGLIKAYKSDTLGNLVFRKTARNFNPLC 178 Query: 201 AMAAKCTIAQVSEVVELGQLDPENIVTPGIFVQRIVQTKEAQQ 243 AMAAK +A+V E+V G+LDP+ I PGI+VQ I + ++ ++ Sbjct: 179 AMAAKICVAEVEEIVPAGELDPDEIHLPGIYVQHIYKGEKFEK 221 >CC0206 [I] COG1788 Acyl CoA Ccr Caulobacter vibrioides Length = 236 Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 108/219 (49%), Positives = 156/219 (71%), Gaps = 3/219 (1%) Query: 20 VINKIS-DSLEQAVADIHDGATIMIGGFGNAGMPSALIDALIAQGARDLTIVNNNAGNGE 78 +++K+ D++E + DG TIM GGFG G+P LI A+ G +DLT+++NN G Sbjct: 1 MVDKVKKDAVEALAGLLFDGMTIMAGGFGLCGIPENLIAAIREAGTKDLTVISNNCGVDG 60 Query: 79 TGLAALLKTKRVKKIVCSFPRQSDSQVFDALYRSGEIELELTPQGNLAERIRAAGAGIGG 138 GL LL+ +++KK+V S+ ++++F+ LY SGE+ELE PQG LAERIRA GAGI Sbjct: 61 FGLGILLENRQIKKMVSSYV--GENKLFEQLYLSGELELEFNPQGTLAERIRAGGAGIPA 118 Query: 139 FFSPTGYGTMLAEGKDTREINGRHYVLESPIHADFALIKALRGDRWGNLVYRKTARNFGP 198 FF+ TGYGT++AEGK+TRE +G YV+E + AD +++KA + D GNL+YRKTARNF P Sbjct: 119 FFTRTGYGTLVAEGKETREFDGEMYVMERGLTADLSIVKAWKADAEGNLIYRKTARNFNP 178 Query: 199 IMAMAAKCTIAQVSEVVELGQLDPENIVTPGIFVQRIVQ 237 +MA A K T+ +V E+V +G+LD + I TPGI+V R+++ Sbjct: 179 MMATAGKKTVVEVEELVAIGELDKDAIHTPGIYVDRLIK 217 >RSc1570 [I] COG1788 Acyl CoA Rso Ralstonia solanacearum Length = 232 Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 112/217 (51%), Positives = 153/217 (70%), Gaps = 3/217 (1%) Query: 21 INKISDSLEQAVADI-HDGATIMIGGFGNAGMPSALIDALIAQGARDLTIVNNNAGNGET 79 +NKI S +A+A I DG TI +GGFG G+P ALI AL GA+ LT ++NNAG Sbjct: 1 MNKIYASAAEALAGIVKDGQTIAVGGFGLCGIPEALIGALRDSGAKGLTCISNNAGVDGF 60 Query: 80 GLAALLKTKRVKKIVCSFPRQSDSQVFDALYRSGEIELELTPQGNLAERIRAAGAGIGGF 139 GL LL+T+++KK++ S+ +++ F+ Y SGE+ELE TPQG LAE++RA GAGI F Sbjct: 61 GLGRLLETRQIKKMISSYV--GENKEFERQYLSGELELEFTPQGTLAEKLRAGGAGIPAF 118 Query: 140 FSPTGYGTMLAEGKDTREINGRHYVLESPIHADFALIKALRGDRWGNLVYRKTARNFGPI 199 F+ TG GT++A+GK+ RE +G YV+E + AD AL+KA + D+ GNL Y +TARNF P+ Sbjct: 119 FTRTGVGTVVADGKEVREFDGEQYVMERSLIADVALVKAWKADKSGNLKYHRTARNFNPM 178 Query: 200 MAMAAKCTIAQVSEVVELGQLDPENIVTPGIFVQRIV 236 AMA + TI +V E+VE G DP+ + TPG+FVQRIV Sbjct: 179 CAMAGRITIVEVEEIVETGTFDPDEVHTPGVFVQRIV 215 >DRA0068 [I] COG1788 Acyl CoA Dra Deinococcus radiodurans Length = 231 Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 117/217 (53%), Positives = 158/217 (72%), Gaps = 3/217 (1%) Query: 21 INKISDSLEQAVADI-HDGATIMIGGFGNAGMPSALIDALIAQGARDLTIVNNNAGNGET 79 +NK S +A+ DI HDG T+ +GGFG G+P LI AL GA+DLT V+NNAG Sbjct: 1 MNKEYPSAAEALRDIVHDGQTVAVGGFGLCGIPEQLIVALRDSGAKDLTAVSNNAGVDGW 60 Query: 80 GLAALLKTKRVKKIVCSFPRQSDSQVFDALYRSGEIELELTPQGNLAERIRAAGAGIGGF 139 GL LL+T++++K++ S+ +++ F+ Y SGE+ELE TPQG LAER+RA GAGI GF Sbjct: 61 GLGLLLQTRQIRKMISSYV--GENKEFERQYLSGELELEFTPQGTLAERMRAGGAGIPGF 118 Query: 140 FSPTGYGTMLAEGKDTREINGRHYVLESPIHADFALIKALRGDRWGNLVYRKTARNFGPI 199 ++ TG GT++AEGK+ ++ +G Y+LE I AD AL+KA + DR GNLVYRKTARNF P+ Sbjct: 119 YTKTGVGTLVAEGKEHKDFDGETYILERGIRADLALVKAWKADRAGNLVYRKTARNFNPL 178 Query: 200 MAMAAKCTIAQVSEVVELGQLDPENIVTPGIFVQRIV 236 A K T+A+V E+VE+G LDP++I TPGIFVQR+V Sbjct: 179 AATCGKVTVAEVEEIVEVGDLDPDHIDTPGIFVQRVV 215 >PA1999 [I] COG1788 Acyl CoA Pae Pseudomonas aeruginosa Length = 232 Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 107/219 (48%), Positives = 155/219 (70%), Gaps = 2/219 (0%) Query: 21 INKISDSLEQAVADIHDGATIMIGGFGNAGMPSALIDALIAQGARDLTIVNNNAGNGETG 80 ++K S E+A+ + DG T++ GGFG G+P LI + +G RDLT+V+NN G G Sbjct: 4 LDKRVGSYEEALEGLTDGMTVLAGGFGLCGIPENLIAEIRRRGVRDLTVVSNNCGVDGFG 63 Query: 81 LAALLKTKRVKKIVCSFPRQSDSQVFDALYRSGEIELELTPQGNLAERIRAAGAGIGGFF 140 L LL+ ++++K++ S+ ++ +F+ SGE+E+ELTPQG+LAE+IRA GAGI FF Sbjct: 64 LGVLLEDRQIRKMIASY--VGENALFEQQLLSGELEVELTPQGSLAEKIRAGGAGIPAFF 121 Query: 141 SPTGYGTMLAEGKDTREINGRHYVLESPIHADFALIKALRGDRWGNLVYRKTARNFGPIM 200 + TGYGT +AEGK+ RE NGRHY+LE I DFA++K + D +GN+VYR TA+NF P++ Sbjct: 122 TATGYGTPVAEGKEAREFNGRHYILEPAITGDFAIVKGWKADHFGNVVYRHTAQNFNPLV 181 Query: 201 AMAAKCTIAQVSEVVELGQLDPENIVTPGIFVQRIVQTK 239 A A + T+ +V E+VE G+LDP I TPGI+V RI+Q + Sbjct: 182 ATAGRITVVEVEEIVEPGELDPTQIHTPGIYVDRIIQGR 220 >CC2405 [I] COG1788 Acyl CoA Ccr Caulobacter vibrioides Length = 241 Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 105/218 (48%), Positives = 145/218 (66%), Gaps = 3/218 (1%) Query: 22 NKISDSLEQAVADI-HDGATIMIGGFGNAGMPSALIDALIAQGARDLTIVNNNAGNGETG 80 +KI +S A+ + DG T+M GGFG +G P LI AL G + LT+++NN G G Sbjct: 3 SKIYESAAAALEGVVFDGMTLMSGGFGLSGNPETLIPALKDTGVKALTVISNNCGADGFG 62 Query: 81 LAALLKTKRVKKIVCSFPRQSDSQVFDALYRSGEIELELTPQGNLAERIRAAGAGIGGFF 140 L LL +++K+V S+ ++++F+ LY SGE+ELEL PQG LAERIRA GAGI F+ Sbjct: 63 LWMLLNNGQIRKMVSSY--VGENKLFEQLYLSGELELELNPQGTLAERIRAGGAGIPAFY 120 Query: 141 SPTGYGTMLAEGKDTREINGRHYVLESPIHADFALIKALRGDRWGNLVYRKTARNFGPIM 200 + TG GT++AEGK G Y+ E+ + AD +++KA + D GNLV+R TARNF P+M Sbjct: 121 TKTGVGTVVAEGKPVETFEGEPYLRETWLRADLSIVKAWKADPEGNLVFRMTARNFNPVM 180 Query: 201 AMAAKCTIAQVSEVVELGQLDPENIVTPGIFVQRIVQT 238 A A K TI +V E+VE G+LD I TPGI+V RIV++ Sbjct: 181 ATAGKVTIVEVEEIVEAGELDANAIHTPGIYVDRIVKS 218