BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0008.p (556 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp1363 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 370 e-102 RSp0507 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 354 3e-97 RSp0303 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 347 3e-95 RSp1406 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 342 2e-93 RSc1460 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 342 2e-93 RSc1155 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 334 3e-91 YPO1675 [NT] COG0840 Methyl-accepting chemotaxis protein Ype Yer... 330 4e-90 RSp1027 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 326 1e-88 RSp1209 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 322 2e-87 STM3577 [NT] COG0840 Methyl-accepting chemotaxis protein Sty Sal... 320 5e-87 >RSp1363 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 543 Score = 370 bits (949), Expect = e-102, Method: Compositional matrix adjust. Identities = 236/536 (44%), Positives = 332/536 (61%), Gaps = 44/536 (8%) Query: 1 LNKFSIKIRLILAISFLTIMLLASGIVGLVSLHSTNEKMRSLYEDRLVAYAYLEQIESTL 60 ++ I +RL A + + +L+ VG+ L N KM + +R A QI++ Sbjct: 3 ISDMRIGVRLGAAFALVVALLIGIAAVGIQRLDDNNTKMGQIVSERYSLIALSNQIKNN- 61 Query: 61 ESARSGIYGIITLDSSEGWDPNEIDRRLDLLVNNLKTVEPVIRSYQATYLTPEEST-LLE 119 G+ N I L LLV + + Y A ++ LE Sbjct: 62 -----------------GYKANGILSNL-LLVTTPEQKTKYMSDYAAIRQANAQAYGRLE 103 Query: 120 RLLKQRQHYADEGVMPAVESLRKRSFQGA-----------DDI------YSGAMRKQWDA 162 +LL D+G E RS GA D++ Y G M + D Sbjct: 104 KLLT-----TDQGKALFKEQFDARSAYGASVRKFFALVDADNVQEARALYQGDMSRLQDR 158 Query: 163 VHQTLSDLKELQIN-VGRELYEHEQQRYRQLILMALLAMGAGLIVAVLEAWLLVRAISQP 221 + + + + Q + ++ E Q I M +LA+ A L+ A+ + R I++P Sbjct: 159 YYVLVDKMVDHQAGEMEHDVSEAAAQGANAKIQMIVLAVLATLL-AIATGAFITRTITRP 217 Query: 222 LTQAVGIAQAVAGGDLSRQIEVRSQDETGQLMQALKDMTQRLYQIVAVVRQGTETITMAS 281 + A+ +A+AVA G+L+ +EV +QDE G+L+ ALK M + L+ IV+ VR GT+TIT AS Sbjct: 218 INHAMHLAEAVAQGNLTHLLEVDTQDEIGRLLAALKHMIENLHGIVSQVRGGTDTITRAS 277 Query: 282 KEITSGNLDLSARTEQQAGSLEETASAMAQLTSTVKQNADNASQANQLAASASEVAVRGG 341 E+ SGN+DLS+RTEQQA SLEETA+AM QLTSTVKQNADNA +A++LA++AS VA +GG Sbjct: 278 SEVASGNIDLSSRTEQQASSLEETAAAMEQLTSTVKQNADNAQEASRLASNASMVATKGG 337 Query: 342 EVVRQVVDTMTSINQSSTRIVDIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAS 401 + V + + TM++IN SS +IVDII VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA Sbjct: 338 DAVDEAIQTMSTINTSSRKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAG 397 Query: 402 EVRSLAQRAASAAREIKDLIDDSVEKVGKGSALVDQAGKTMEEVVTAVRKVTDMVGEISS 461 EVRSLAQR+A+AA+EIK LI+DSV V G+A V++AG+ + +VV ++ VT++V EIS+ Sbjct: 398 EVRSLAQRSAAAAKEIKALIEDSVGHVSTGTAKVEEAGQIIRDVVAGIQNVTNIVSEISA 457 Query: 462 ASQEQSQGIQEIDRAIVLMDSSTQQNAALVEQAAAAAQALEDQAEKLSLAMSAFRL 517 +S+EQS GI++I+ AI MD +TQ+NA+LVE++A AAQAL+DQA +L+ +S F+L Sbjct: 458 SSREQSDGIEQINEAITQMDKATQENASLVEESATAAQALQDQANQLADMVSTFKL 513 >RSp0507 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 600 Score = 354 bits (908), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 231/524 (44%), Positives = 340/524 (64%), Gaps = 19/524 (3%) Query: 1 LNKFSIKIRLILAISFLTIMLLASGIVGLVSLHSTNEKMRSLYEDRLVAYAYLEQ----- 55 LN+ SI+ RL A+ L +L G +G++ + +++ +R +Y ++L + + + + Sbjct: 2 LNRLSIRFRLNAALVLLGALLAIIGTIGVIGMRASDANIREIYSNQLASTSLVSKAQLNA 61 Query: 56 --IESTLESARSGIYGIITLDSSEGWDPNEIDRRLDLLVNNLKTVEPVIRSYQATYLTPE 113 I +TL+ A + +D+++ P ID+ + E + Y+ ++ + Sbjct: 62 AVIRTTLDRA------VFHIDAAD--VPAVIDKAAAYRAKS----EDAWKQYKGLPMSAD 109 Query: 114 ESTLLERLLKQRQHYADEGVMPAVESLRKRSFQGADDIYSGAMRKQWDAVHQTLSDLKEL 173 E+ L + +R +G+ P V +LR R D + + A+ + L Sbjct: 110 EARLAADVDAKRTTLFRDGIEPLVTALRARDAAAVDKAVMTVIPPMFVALSAAVDALDRN 169 Query: 174 QINVGRELYEHEQQRYRQLILMALLAMGAGLIVAVLEAWLLVRAISQPLTQAVGIAQAVA 233 Q + YE R + + + + A+ G++ AV A+ L RAIS PL++ +G ++ Sbjct: 170 QAEQAKAAYEGAVTRSQNFLWLIIGAIVVGILSAVACAFGLDRAISVPLSRMLGSFGEIS 229 Query: 234 GGDLSRQIEVRSQDETGQLMQALKDMTQRLYQIVAVVRQGTETITMASKEITSGNLDLSA 293 G+L+ QI V SQDE G L + L+DM + L + + +R G+++I A+K+I +GN+DLS Sbjct: 230 RGNLTEQIVVTSQDEMGALTRGLQDMQRGLIRTIETMRGGSDSIASATKQIAAGNMDLSQ 289 Query: 294 RTEQQAGSLEETASAMAQLTSTVKQNADNASQANQLAASASEVAVRGGEVVRQVVDTMTS 353 RTE+QA SLEETAS+M +LTS VKQNADNA QA+ LA +AS++AV+GGEVV +VV+TM Sbjct: 290 RTEEQASSLEETASSMEELTSIVKQNADNARQASTLAVNASDIAVKGGEVVGRVVETMAG 349 Query: 354 INQSSTRIVDIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRAASA 413 IN SS +I DII VI+GIAFQTNILALNAAVEAARAGEQGRGFAVVA EVRSLAQR+A A Sbjct: 350 INDSSKKIADIIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAGA 409 Query: 414 AREIKDLIDDSVEKVGKGSALVDQAGKTMEEVVTAVRKVTDMVGEISSASQEQSQGIQEI 473 A+EIK+LI DSV +V G+ LV +AG ++EVV AV++VTD++GEIS+AS EQS GI+++ Sbjct: 410 AKEIKELISDSVGRVENGTTLVAEAGTVIDEVVVAVKRVTDIMGEISAASDEQSSGIEQV 469 Query: 474 DRAIVLMDSSTQQNAALVEQAAAAAQALEDQAEKLSLAMSAFRL 517 ++A+ MD TQQNAALVE+AAAAAQ+LE+QA L +++FRL Sbjct: 470 NQAVNQMDEVTQQNAALVEEAAAAAQSLEEQARLLRETVASFRL 513 >RSp0303 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 515 Score = 347 bits (891), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 238/518 (45%), Positives = 328/518 (63%), Gaps = 6/518 (1%) Query: 1 LNKFSIKIRLILAISFLTIMLLASGIVGLVSLHSTNEKMRSLYEDRLVAYAYLEQIESTL 60 + SIK RL L + L + L G +GLV +N ++ Y + L + L E+ L Sbjct: 1 MKTLSIKARLALVLFVLAVFLAGVGALGLVGNLRSNAALKETYSNNLASTRALGLAEAKL 60 Query: 61 ESARSGI-YGIITLDSSEGWDPNEIDRRLDLLVNNLKTVEPVIRSYQATYLTPEESTLLE 119 AR+ + I D ++ D I R + N+ K + + TPEE + Sbjct: 61 AQARTALDRAIFETDPAKTTDA--ISRIQAQIGNSEKAWAEYL---NLPFSTPEEEKVAG 115 Query: 120 RLLKQRQHYADEGVMPAVESLRKRSFQGADDIYSGAMRKQWDAVHQTLSDLKELQINVGR 179 KQR + + AVE+L++ A + + + L +Q V Sbjct: 116 EAKKQRDLIIKDNIAAAVEALKRGDKDAARQLAVEQIPYNFRTYASQSDRLNAIQTEVSA 175 Query: 180 ELYEHEQQRYRQLILMALLAMGAGLIVAVLEAWLLVRAISQPLTQAVGIAQAVAGGDLSR 239 LYE Q ++ L+ ++ + AGL +A +L RAIS PL + + + +A G+L+ Sbjct: 176 ALYEASQSFFKGLVWTFVIVIAAGLALAAGCYLILSRAISLPLAEMLVHFREIASGNLTT 235 Query: 240 QIEVRSQDETGQLMQALKDMTQRLYQIVAVVRQGTETITMASKEITSGNLDLSARTEQQA 299 + VRS+DE G LM+ L+ M +L V VR G+E+I A+++I +GN +LS RTE+QA Sbjct: 236 DVRVRSRDEMGVLMEGLQQMQDKLKATVLTVRHGSESIASATQQIAAGNTNLSQRTEEQA 295 Query: 300 GSLEETASAMAQLTSTVKQNADNASQANQLAASASEVAVRGGEVVRQVVDTMTSINQSST 359 SLEETAS+M +LTS VKQNADNA QA+ LA +AS +A++GG VV+ VV TM I++SS Sbjct: 296 SSLEETASSMEELTSIVKQNADNARQASTLAENASGIAMQGGAVVQDVVTTMAQISESSR 355 Query: 360 RIVDIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRAASAAREIKD 419 +I DIIAVI+GIAFQTNILALNAAVEAARAGEQGRGFAVVA EVR+LAQR+A AA+EIK Sbjct: 356 KITDIIAVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRSAGAAKEIKS 415 Query: 420 LIDDSVEKVGKGSALVDQAGKTMEEVVTAVRKVTDMVGEISSASQEQSQGIQEIDRAIVL 479 LI+DS +V GS+LV +AGKTM+E+V AV++VTD++GEIS+ S EQS GI++I+ A+ Sbjct: 416 LIEDSATRVESGSSLVARAGKTMDEIVVAVKRVTDIMGEISAGSAEQSTGIEQINEAVTQ 475 Query: 480 MDSSTQQNAALVEQAAAAAQALEDQAEKLSLAMSAFRL 517 MD TQQNAALVEQAAAAAQALE+QA++L A+S FR+ Sbjct: 476 MDDVTQQNAALVEQAAAAAQALEEQADELRRAVSVFRV 513 >RSp1406 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 608 Score = 342 bits (876), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 218/517 (42%), Positives = 327/517 (63%), Gaps = 7/517 (1%) Query: 1 LNKFSIKIRLILAISFLTIMLLASGIVGLVSLHSTNEKMRSLYEDRLVAYAYLEQIESTL 60 +I++RL L ++ + ++ + G GL+ + N ++++ YE +L L + ++++ Sbjct: 2 FRGMTIRLRLALMMAGVAVLAVVIGTTGLLGMRHANTRVQATYEMQLAGAVALAESDASM 61 Query: 61 ESARSGIYGIITLD-SSEGWDPNEIDRRLDLLVNNLKTVEPVIRSYQATYLTPEESTLLE 119 S R + LD ++ + + L+ L + + Y+A TP+E L + Sbjct: 62 LSFR------LVLDRAAMDIKAPSLGKTLERARMFLAKSDASWKRYRALPSTPDERKLAD 115 Query: 120 RLLKQRQHYADEGVMPAVESLRKRSFQGADDIYSGAMRKQWDAVHQTLSDLKELQINVGR 179 R + +G +++++ + AM + + ++ L +Q+ + R Sbjct: 116 EADALRTVFLRDGAQALMQAIQAGDAERTSQTVMEAMPALYRPLGDKVTALSRMQMEIAR 175 Query: 180 ELYEHEQQRYRQLILMALLAMGAGLIVAVLEAWLLVRAISQPLTQAVGIAQAVAGGDLSR 239 YE Q+ + L + + G++ L W L R+I+ PL +A+ A+ + GDL+ Sbjct: 176 ASYEAGQREHDGLSALTAALLLVGIVGGGLLTWSLRRSITVPLNRAIEQAEHITRGDLTH 235 Query: 240 QIEVRSQDETGQLMQALKDMTQRLYQIVAVVRQGTETITMASKEITSGNLDLSARTEQQA 299 I V DETG+++ AL+ M + L +V VR G++ I A+++I +GN DLS RTEQQA Sbjct: 236 AIHVDRADETGRMLLALQRMQESLQGMVGQVRTGSDAIASATQQIAAGNADLSQRTEQQA 295 Query: 300 GSLEETASAMAQLTSTVKQNADNASQANQLAASASEVAVRGGEVVRQVVDTMTSINQSST 359 SLEETAS+M QLT VKQNAD+A QA+ LA +AS++AV+GGEVV +VV+TM I+ SS Sbjct: 296 SSLEETASSMEQLTGMVKQNADSARQASTLAVNASDIAVKGGEVVGRVVETMAGIHDSSR 355 Query: 360 RIVDIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRAASAAREIKD 419 +I DII VI+GIAFQTNILALNAAVEAARAGEQGRGFAVVA EVRSLAQR+A AA+EIK Sbjct: 356 KIADIIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAGAAKEIKT 415 Query: 420 LIDDSVEKVGKGSALVDQAGKTMEEVVTAVRKVTDMVGEISSASQEQSQGIQEIDRAIVL 479 LI DSV +V G+ LV +AG ++EVV AV++VT ++GEIS+AS QS+GI ++++A+ Sbjct: 416 LISDSVGRVESGTTLVAEAGTVIDEVVVAVKRVTGIMGEISAASDAQSEGIAQVNQAVTQ 475 Query: 480 MDSSTQQNAALVEQAAAAAQALEDQAEKLSLAMSAFR 516 MD +TQQNAALVEQAAAAA +L++QA+ L ++AFR Sbjct: 476 MDEATQQNAALVEQAAAAAMSLQEQADGLRGTVAAFR 512 >RSc1460 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 513 Score = 342 bits (876), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 229/522 (43%), Positives = 333/522 (63%), Gaps = 16/522 (3%) Query: 1 LNKFSIKIRLILAISFLTIMLLASGIVGLVSLHSTNEKMRSLYEDRLVAYAYLEQIESTL 60 L + +I+ RL+L +S L ++ L G+ GL+ L N Y ++ + L + + +L Sbjct: 2 LARLTIRTRLVLTVSILFLLALLIGVAGLLGLRDANGAHEETYRNQFPSALALGESDLSL 61 Query: 61 ESARSGIYGIITLDSSEGWDPNE-----IDRRLDLLVNNLKTVEPVIRSYQATYLTPEES 115 AR+ LD + + ++ +DR +L+ + + + Y A EE+ Sbjct: 62 TRARTA------LDKAMLYPEDKDAMQLLDRTEELITGS----DAAWKKYLALPHGDEET 111 Query: 116 TLLERLLKQRQHYADEGVMPAVESLRKRSFQGADDIYSGAMRKQWDAVHQTLSDLKELQI 175 L + + +R+ A + +++LR AD I + K + + L + Q+ Sbjct: 112 RLSKEVGTKREAAAGS-LRDIIKALRASDRAAADAIMDKRVSKSFREANDASQALGKQQL 170 Query: 176 NVGRELYEHEQQRYRQLILMALLAMGAGLIVAVLEAWLLVRAISQPLTQAVGIAQAVAGG 235 + ++ QQ Y ++ + + A+ L+V+ AWLL+RAI PL + +A G Sbjct: 171 TFSKANFDDSQQAYARIRNLVIAAIVLALVVSAGCAWLLLRAIVGPLNATLAQFDRIAAG 230 Query: 236 DLSRQIEVRSQDETGQLMQALKDMTQRLYQIVAVVRQGTETITMASKEITSGNLDLSART 295 DL++ + + +DE G L++ L M L V VR G+E+I A+K+I +GN DLS RT Sbjct: 231 DLTQPVRIDRRDEMGHLLEGLARMQAALTDTVRRVRHGSESIGAATKQIAAGNADLSQRT 290 Query: 296 EQQAGSLEETASAMAQLTSTVKQNADNASQANQLAASASEVAVRGGEVVRQVVDTMTSIN 355 E QA SLEETAS+M ++TS V+QNADNA QA+QLA SAS VA +GG VV VV TM I+ Sbjct: 291 EGQASSLEETASSMEEMTSIVRQNADNARQASQLADSASAVASQGGAVVTDVVATMREIS 350 Query: 356 QSSTRIVDIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRAASAAR 415 SS + +II VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA EVRSLAQR+A+AA+ Sbjct: 351 ASSRTVSEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAAAAK 410 Query: 416 EIKDLIDDSVEKVGKGSALVDQAGKTMEEVVTAVRKVTDMVGEISSASQEQSQGIQEIDR 475 EIK++I+ S+ KV GS L +QAG TME +VT++R+VTD++GEI++AS EQS GI+++++ Sbjct: 411 EIKEMIEASLAKVDTGSKLAEQAGSTMENIVTSIRRVTDIMGEIAAASSEQSSGIEQVNK 470 Query: 476 AIVLMDSSTQQNAALVEQAAAAAQALEDQAEKLSLAMSAFRL 517 A+ LMD +TQQNAALVEQAAAAA++LE+QA+ L+ A++AFRL Sbjct: 471 AVTLMDEATQQNAALVEQAAAAAESLEEQAQALNEAIAAFRL 512 >RSc1155 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 629 Score = 334 bits (857), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 205/333 (61%), Positives = 251/333 (75%), Gaps = 9/333 (2%) Query: 214 LVRAISQPLTQAVGIAQAVAGGDLSRQIEVRSQDETGQLMQALKDMTQRLYQIVAVVRQG 273 L RA+ A +A +AGGDLS +I R D+ L+ A+ M L Q + +R Sbjct: 218 LQRALGGDPAYAAEVANRIAGGDLSVEIATRP-DDRDSLLYAMGRMRGALVQTIGRIRGA 276 Query: 274 TETITMASKEITSGNLDLSARTEQQAGSLEETASAMAQLTSTVKQNADNASQANQLAASA 333 +ETI A++EI SGNLDLS+RTEQQA SLEETASAM +L STV+QNADNA+QANQLA SA Sbjct: 277 SETIGTATREIASGNLDLSSRTEQQASSLEETASAMEELMSTVQQNADNANQANQLAVSA 336 Query: 334 SEVAVRGGEVVRQVVDTMTSINQSSTRIVDIIAVIDGIAFQTNILALNAAVEAARAGEQG 393 S+VAVRGG+VV +VV+TM SIN SS +IVDII VIDGIAFQTNILALNAAVEAARAGEQG Sbjct: 337 SDVAVRGGDVVSRVVETMGSINASSRKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQG 396 Query: 394 RGFAVVASEVRSLAQRAASAAREIKDLIDDSVEKVGKGSALVDQAGKTMEEVVTAVRKVT 453 RGFAVVA EVRSLAQR+A+AA+EIK LIDDSV V GSALV++AG TM E+V +VR+VT Sbjct: 397 RGFAVVAGEVRSLAQRSAAAAKEIKALIDDSVTNVDAGSALVEEAGTTMREIVASVRRVT 456 Query: 454 DMVGEISSASQEQSQGIQEIDRAIVLMDSSTQQNAALVEQAAAAAQALEDQAEKLSLAMS 513 D+VGEI++ASQEQ GI+E+ A+ +D +TQQNAALVEQAAAAAQ+L++QA+ L+ ++ Sbjct: 457 DIVGEITAASQEQRSGIEEVSHAVTQLDDATQQNAALVEQAAAAAQSLQEQADSLTQVVA 516 Query: 514 AFRLGGAHS--------AERLGAPPVAAQSSSG 538 FRL S AE APPV + +G Sbjct: 517 QFRLDPTMSAVRSVVAKAEPTIAPPVPKAAEAG 549 >YPO1675 [NT] COG0840 Methyl-accepting chemotaxis protein Ype Yersinia pestis Length = 557 Score = 330 bits (847), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 182/298 (61%), Positives = 224/298 (75%) Query: 220 QPLTQAVGIAQAVAGGDLSRQIEVRSQDETGQLMQALKDMTQRLYQIVAVVRQGTETITM 279 PL + + +A GDL++ IEV ++E G L +LK M L IV VR G + I Sbjct: 220 HPLNHLIAHIKHIANGDLTQNIEVHGRNEVGTLAASLKHMQSELVTIVGEVRVGADAIYS 279 Query: 280 ASKEITSGNLDLSARTEQQAGSLEETASAMAQLTSTVKQNADNASQANQLAASASEVAVR 339 + EI GN DLSARTEQQA SLEETA++M QLT+TVKQNA+NA QA+QLA SASE A + Sbjct: 280 GASEIAVGNNDLSARTEQQAASLEETAASMEQLTATVKQNAENARQASQLALSASETAQK 339 Query: 340 GGEVVRQVVDTMTSINQSSTRIVDIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVV 399 GG+VV VV TM I SS +I DI +VIDGIAFQTNILALNAAVEAARAGEQGRGFAVV Sbjct: 340 GGKVVADVVQTMHEIAGSSQKIADITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVV 399 Query: 400 ASEVRSLAQRAASAAREIKDLIDDSVEKVGKGSALVDQAGKTMEEVVTAVRKVTDMVGEI 459 A EVR+LAQR+A AA+EIK LIDDSV +V GS LV+ AG+TM ++V AV +VTD++GEI Sbjct: 400 AGEVRNLAQRSAQAAKEIKGLIDDSVNRVDLGSVLVESAGETMGDIVNAVTRVTDIMGEI 459 Query: 460 SSASQEQSQGIQEIDRAIVLMDSSTQQNAALVEQAAAAAQALEDQAEKLSLAMSAFRL 517 +SAS EQS+GI +I +A+ MD TQQNA+LVE++A+AA +LE+QA L+ AMS F L Sbjct: 460 ASASDEQSRGIDQIGQAVAEMDRVTQQNASLVEESASAAASLEEQASMLTQAMSVFVL 517 >RSp1027 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 524 Score = 326 bits (835), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 214/513 (41%), Positives = 323/513 (62%), Gaps = 5/513 (0%) Query: 5 SIKIRLILAISFLTIMLLASGIVGLVSLHSTNEKMRSLYEDRLVAYAYLEQIESTLESAR 64 S++ +++ A +L SGI + L N + Y + A L ++ +T R Sbjct: 7 SVRFKILCAFGVCIALLAISGIFAVRGLMRLNGNITDAYTGNTIPIAQLAEVRATQLDLR 66 Query: 65 SGIYGIITLDSSEGWDPNEIDRRLDLLVNNLKTVEPVIRSYQATYLTPEESTLLERLLKQ 124 + L D E+ + + +++ V + Y +T ++ + + Sbjct: 67 LQMRRTQALKD----DAAEVTAAIQAIRTDVEQTNRVWKQYFPDSITSDKEREVATKIND 122 Query: 125 RQHYADEGVMPAVESLRKRSFQGADDIYSGAMRKQWDAVHQTLSDLKELQINVGRELYEH 184 ++ AV++LR + A I +G ++ + L+ E+ + ++ Sbjct: 123 TLPKFNDAANKAVDALRAGNLDAAGQIING-NSATGTSISEWLAQDIEINLEQAKDFMTD 181 Query: 185 EQQRYRQLILMALLAMGAGLIVAVLEAWLLVRAISQPLTQAVGIAQAVAGGDLSRQIEVR 244 Y++++L+ + + AG++V +W L+RAIS+PL++AV +A +AGG L +I + Sbjct: 182 SAATYQRILLVTIALVCAGIVVGGAMSWYLLRAISRPLSRAVDVANHIAGGTLENEIVID 241 Query: 245 SQDETGQLMQALKDMTQRLYQIVAVVRQGTETITMASKEITSGNLDLSARTEQQAGSLEE 304 SQ E G+L+ AL+ M ++L V ++ E++T+AS+EI +GN+DLSARTEQQA SLEE Sbjct: 242 SQGEFGELLIALRKMDRQLADTVRGIKASAESVTVASQEIAAGNVDLSARTEQQAASLEE 301 Query: 305 TASAMAQLTSTVKQNADNASQANQLAASASEVAVRGGEVVRQVVDTMTSINQSSTRIVDI 364 TAS+M QLT TVKQNA+NA+QAN LAASAS +A G + V+++V T+ I+ SS +I +I Sbjct: 302 TASSMTQLTETVKQNAENAAQANTLAASASTMAQAGNDAVQEMVGTIDKISTSSGKISEI 361 Query: 365 IAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRAASAAREIKDLIDDS 424 +I+GIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQR+A+AA+EIK+LI S Sbjct: 362 TGLIEGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAAAAKEIKELIGSS 421 Query: 425 VEKVGKGSALVDQAGKTMEEVVTAVRKVTDMVGEISSASQEQSQGIQEIDRAIVLMDSST 484 V V +GS + G+ M +V A+R+V+D+V EI++AS EQS+GI+++++A+ MD T Sbjct: 422 VAVVQEGSKQAVEVGQNMGQVKEAIRRVSDIVSEIAAASAEQSRGIEQVNQAVTQMDEVT 481 Query: 485 QQNAALVEQAAAAAQALEDQAEKLSLAMSAFRL 517 QQNAALVEQAAAAAQ+LE+QA L A+S FRL Sbjct: 482 QQNAALVEQAAAAAQSLEEQATSLRRAVSVFRL 514 >RSp1209 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 524 Score = 322 bits (824), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 225/520 (43%), Positives = 331/520 (63%), Gaps = 9/520 (1%) Query: 5 SIKIRLILAISFLTIMLLASGIVGLVSLHSTNEKMRSLYEDRLVAYAYLEQIESTLESAR 64 SI+ RL + ++ +M+ A G G+ + +TN +R++Y + L + + L AR Sbjct: 10 SIRTRLTVLVAAFAVMVAAVGGTGIATGRATNADLRAVYLEDAKGLDLLAKDTANLLWAR 69 Query: 65 SGIYGIITLDSSEGWDPNEIDRRLDLLVNNLKTVEPVIRSYQATYLTPEESTLLERLLKQ 124 + ++ S P E+ + L + ++ + + L+ Sbjct: 70 IHLTNFDSVSS-----PEELAKLLKDAHAMVDAANAAWAAFTQLPIPDADRAQLQAADAA 124 Query: 125 RQHYADEGVMPAVESLRKRSFQGADDIYSGAMRKQWDAVHQTLSDLKELQINVGRELYEH 184 R + + PA+ +L + D+ + + + + L L + + G+ ++ Sbjct: 125 RARFVKTALEPAITALERSDLTTYRDLNTTQVPQLFAVYDAALQPLVKARFAYGQARFDR 184 Query: 185 EQQRYRQLILMALLAMGAGLIVAVLEAWLLVRAISQPLTQAVGIAQAVAGGDLSRQIEVR 244 Q RY + ++ + A L+++V+ +L R + +PL +A+ + + +A GDL+ +++ Sbjct: 185 SQSRYAASVWLSGGLLLAALVLSVVARGVLGRTLVRPLERAIHVFERMAAGDLATRMDEP 244 Query: 245 SQ----DETGQLMQALKDMTQRLYQIVAVVRQGTETITMASKEITSGNLDLSARTEQQAG 300 ++ DET +LM A+ M L ++V VR G+++I A+K+I +GN DLS RTEQQA Sbjct: 245 TRAGRRDETARLMHAVASMQSSLQKMVGQVRTGSDSIASATKQIAAGNADLSQRTEQQAS 304 Query: 301 SLEETASAMAQLTSTVKQNADNASQANQLAASASEVAVRGGEVVRQVVDTMTSINQSSTR 360 SLEETAS+M +LTS VKQNADNA QA+ LA +AS+VAV+GGEVV +VV+TM IN SS + Sbjct: 305 SLEETASSMEELTSIVKQNADNARQASTLAVNASDVAVKGGEVVGRVVETMAGINGSSKK 364 Query: 361 IVDIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRAASAAREIKDL 420 I DII VI+GIAFQTNILALNAAVEAARAGEQGRGFAVVA EVRSLAQR+A AA+EIK+L Sbjct: 365 IADIIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAGAAKEIKEL 424 Query: 421 IDDSVEKVGKGSALVDQAGKTMEEVVTAVRKVTDMVGEISSASQEQSQGIQEIDRAIVLM 480 I DSV++V GS LV +AG ++EVV AV++VTD++GEIS+AS EQS GI+++++A+ M Sbjct: 425 ISDSVDRVQNGSKLVAEAGTVIDEVVVAVKRVTDIMGEISAASDEQSSGIEQVNQAVNQM 484 Query: 481 DSSTQQNAALVEQAAAAAQALEDQAEKLSLAMSAFRLGGA 520 D TQQNAALVEQAAAAA++LE QAE L A+SAFR+G A Sbjct: 485 DEVTQQNAALVEQAAAAAESLEAQAEALRQAVSAFRVGHA 524 >STM3577 [NT] COG0840 Methyl-accepting chemotaxis protein Sty Salmonella typhimurium LT2 Length = 547 Score = 320 bits (820), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 179/307 (58%), Positives = 234/307 (76%), Gaps = 1/307 (0%) Query: 212 WL-LVRAISQPLTQAVGIAQAVAGGDLSRQIEVRSQDETGQLMQALKDMTQRLYQIVAVV 270 WL L R + +PL + + Q +A GDL+ +IE + E GQL LK M Q L + V+ V Sbjct: 210 WLGLQRVLLRPLQRIMAHIQTIADGDLTHEIEAEGRSEMGQLAAGLKTMQQSLIRTVSAV 269 Query: 271 RQGTETITMASKEITSGNLDLSARTEQQAGSLEETASAMAQLTSTVKQNADNASQANQLA 330 R ++I + EI++G+ DLS+RTEQQA +LEETA++M QLT+TV+QN DNA QA LA Sbjct: 270 RDNADSIYTGAGEISAGSSDLSSRTEQQASALEETAASMEQLTATVRQNTDNARQATGLA 329 Query: 331 ASASEVAVRGGEVVRQVVDTMTSINQSSTRIVDIIAVIDGIAFQTNILALNAAVEAARAG 390 +ASE A +GG VV VV TM I +SS +IVDI +VIDGIAFQTNILALNAAVEAARAG Sbjct: 330 KTASETARKGGRVVDNVVSTMNDIAESSEKIVDITSVIDGIAFQTNILALNAAVEAARAG 389 Query: 391 EQGRGFAVVASEVRSLAQRAASAAREIKDLIDDSVEKVGKGSALVDQAGKTMEEVVTAVR 450 EQGRGFAVVA EVR+LA R+A AA+EIK LI++SV ++ GS V +AG+TM+E+V AV Sbjct: 390 EQGRGFAVVAGEVRTLASRSAQAAKEIKVLIENSVSRIDTGSTQVREAGETMKEIVNAVT 449 Query: 451 KVTDMVGEISSASQEQSQGIQEIDRAIVLMDSSTQQNAALVEQAAAAAQALEDQAEKLSL 510 +VTD++GEI+SAS EQS+GI+++ +A+ MDS TQQNA+LVE++AAAA ALEDQA +L Sbjct: 450 RVTDIMGEIASASDEQSKGIEQVAQAVSEMDSVTQQNASLVEESAAAAAALEDQANELRQ 509 Query: 511 AMSAFRL 517 A++AFR+ Sbjct: 510 AVAAFRI 516