BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0159.p (470 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1857 [KE] COG1167 Transcriptional regulators containing a DNA... 463 e-130 SMc01406 [KE] COG1167 Transcriptional regulators containing a DN... 295 1e-79 CC3116 Non COG 293 7e-79 PA2100 [KE] COG1167 Transcriptional regulators containing a DNA-... 198 2e-50 BS_ydeF [KE] COG1167 Transcriptional regulators containing a DNA... 177 3e-44 mlr7131 [KE] COG1167 Transcriptional regulators containing a DNA... 167 6e-41 SMb20426 [KE] COG1167 Transcriptional regulators containing a DN... 164 6e-40 AGl1192 [KE] COG1167 Transcriptional regulators containing a DNA... 151 3e-36 AGc3389 [KE] COG1167 Transcriptional regulators containing a DNA... 148 3e-35 AGl244 [KE] COG1167 Transcriptional regulators containing a DNA-... 130 5e-30 >RSc1857 [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Rso Ralstonia solanacearum Length = 463 Score = 463 bits (1192), Expect = e-130, Method: Compositional matrix adjust. Identities = 251/449 (55%), Positives = 308/449 (68%), Gaps = 11/449 (2%) Query: 10 WVGRFAANDGPRYLQIVGFMEQAISDERLRPGDRLPPQRQLAEYLQVDLTTVTRAYGEAR 69 W R G RYLQIV F+EQAI D RL GDR+PPQR LA+ L VDLTTVTRAY EA+ Sbjct: 13 WDLRITRTGGARYLQIVEFIEQAIGDGRLAAGDRVPPQRSLAKALGVDLTTVTRAYTEAK 72 Query: 70 RRHLLEARGSAGTFVAAPKVDLSQLIDLSMNIPPPPAGIDLNDLLRQGMSQVLIHSDADL 129 RRHL++ARG+ GTF+AAP+ +L++++D+SMN+PPPPAG+D DLLR+G+SQVL+HSD L Sbjct: 73 RRHLIDARGALGTFIAAPRAELARVVDMSMNVPPPPAGLDFQDLLRRGLSQVLLHSDPHL 132 Query: 130 LMTYHLGGGSSADRAAGAMWMQAMLGPVDEARVLACPGAQSALAALVLSQTRPGEVILAE 189 LMTY LGGGS ADRAAGA W+ ++G VD +R++ CPGAQ+ALAA++LS TRPG+ I+ E Sbjct: 133 LMTYQLGGGSPADRAAGANWLAQIVGAVDASRLVVCPGAQAALAAVILSHTRPGDAIVTE 192 Query: 190 PLAYPGLLTVAAHLGRRVMAVDVDDEGMRPDLLMTMARRHQARLVYLNPTLQNPTTRTMP 249 PL YPG+ A LGRRV+ V D +GMRPD L A ARL YLNPT QNPTT TMP Sbjct: 193 PLTYPGIRAAAVQLGRRVLTVACDADGMRPDAL-EAACAQGARLAYLNPTAQNPTTHTMP 251 Query: 250 ATRRAEIAALATRLDLRIIEDDPYWRFAAHAPRPLAHYAPGHVFYVSTLSKCLLPGLRTA 309 A RRA+IA A R + I+EDDPYW AP PLAH+AP +YVSTLSK L PGLRTA Sbjct: 252 AARRADIARTAERCGVTILEDDPYWLLTPDAPPPLAHFAPAQTYYVSTLSKTLSPGLRTA 311 Query: 310 YVLMPERQAQEEVLGALRSFVLMSTPLMTALSTQWIHDGTAATLLEGIRSEAWARHELAL 369 Y+L+P +++L ALR+F LM+ P+ ALSTQWI DG+A LL+GIR+EA+AR ELA Sbjct: 312 YLLLPAGTRGDDLLAALRAFALMAAPVTAALSTQWIQDGSAPQLLDGIRTEAFARRELAD 371 Query: 370 RTLGGAGLSAGGGIHLWKALPAHWQGQEFVLKARQSGLNVVSQSSFAVPLEGREPGADSG 429 R L G G + GIH+W LP HW + A L V +F D Sbjct: 372 RWLSGIGQAPPTGIHVWHRLPDHWSTHQLTRAALAEDLRVTPSDAF----------CDGP 421 Query: 430 GQGACIRISLGRSRSRFELVNALRRLMEL 458 IRISLG R +L ALR+L L Sbjct: 422 NPPNAIRISLGGVDDRAQLSLALRKLAVL 450 >SMc01406 [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Sme Sinorhizobium meliloti Length = 472 Score = 295 bits (756), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 185/463 (39%), Positives = 263/463 (56%), Gaps = 30/463 (6%) Query: 6 LSLAWVGRFAANDGPRYLQIVGFMEQAISDERLRPGDRLPPQRQLAEYLQVDLTTVTRAY 65 + ++WV GP YL I + I+ RL G RLPPQR LA L +D TTV+RAY Sbjct: 6 VDVSWVPALGRAGGPLYLAIADEIAADIAAGRLEDGVRLPPQRALAAALGIDFTTVSRAY 65 Query: 66 GEARRRHLLEARGSAGTFVAAPK-------------VDLSQLIDLSMNIPPPPAGIDLND 112 EARRR L+E R GT+V A + L L+D+SMN+PP L++ Sbjct: 66 NEARRRGLVEGRVGQGTYVTARRRSAVRPSSGGLAGGLLGSLVDMSMNLPPLFDDPALSE 125 Query: 113 LLRQGMSQVLIHSDADLLMTYHLGGGSSADRAAGAMWMQAMLGPVDEARVLACPGAQSAL 172 + ++ L +LLM Y GG+ DRAAGA W++ LG + R++ C GAQ AL Sbjct: 126 KMWADVA-ALDQRGPELLMRYQPVGGAERDRAAGAAWLKPRLGDLQADRLVVCTGAQGAL 184 Query: 173 AALVLSQTRPGEVILAEPLAYPGLLTVAAHLGRRVMAVDVDDEGMRPDLLMTMARRHQAR 232 A V G+ I AE L YPGL ++AAH+G +++V +D G+ PD R++ + Sbjct: 185 LASVGMLATKGDRICAEALTYPGLRSLAAHMGIELVSVGIDRNGILPDAFEEACARYKPK 244 Query: 233 LVYLNPTLQNPTTRTMPATRRAEIAALATRLDLRIIEDDPYWRFAAHAPRPLAHYAPGHV 292 +Y NPTL NPTT T+P RR I A+A R + +IEDD Y A+ PLA AP V Sbjct: 245 ALYCNPTLHNPTTATLPLERREAIVAIARRHGVVVIEDDAYGALPANPVPPLAALAPDLV 304 Query: 293 FYVSTLSKCLLPGLRTAYVLMPERQAQEEVLGALRSFVLMSTPLMTALSTQWIHDGTAAT 352 F+++ L+KCL P LR AY++ P+R A + GA+R+ V M++PL A++T+W+ +GTA Sbjct: 305 FHIAGLAKCLSPALRIAYLVAPDRSAAVRLEGAIRATVGMTSPLSAAIATRWLEEGTAQA 364 Query: 353 LLEGIRSEAWARHELALRTLGGAGLSAG-GGIHLWKALPAHWQGQEFVLKARQSGLNVVS 411 +L IR+EA AR +A++ L GA L A G HLW LP+ W EF + R +G+ VV+ Sbjct: 365 VLAAIRTEAGARQRIAIKGLDGADLLADREGFHLWLKLPSRWSRGEFTAQLRMAGIGVVA 424 Query: 412 QSSFAV--PLEGREPGADSGGQGACIRISLGRSRSRFELVNAL 452 +FA+ P E +R+ LG +R+R EL ++L Sbjct: 425 SDAFAISDPPE-------------AVRLGLGAARTRDELRHSL 454 >CC3116 Non COG Length = 448 Score = 293 bits (749), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 190/454 (41%), Positives = 253/454 (55%), Gaps = 19/454 (4%) Query: 9 AWVGRFAANDGPRYLQIVGFMEQAISDERLRPGDRLPPQRQLAEYLQVDLTTVTRAYGEA 68 AW+ R A DGP Y +I +E A+++ L+ GD++P QR++A + VD TTVTRAYG A Sbjct: 13 AWLRRVEAFDGPAYRRIALALEAAVAEGELQAGDQIPAQREVARLIGVDFTTVTRAYGLA 72 Query: 69 RRRHLLEARGSAGTFVAA-PKVDLSQLIDLSMNIPPPPAGIDLNDLLRQGMSQVLIHSDA 127 R R L+E GTF+ D + LIDLSMN+PPPP G++L LL+ +L ++ Sbjct: 73 RERGLIEGTAGRGTFIRLRINEDEAGLIDLSMNLPPPPQGLNLAGLLQDATRAILARTEP 132 Query: 128 DLLMTYHLGGGSSADRAAGAMWMQAMLGPVDEARVLACPGAQSALAALVLSQTRPGEVIL 187 LM YH G GS A R+AGA W+ LGPVD RV+ GAQ+AL+AL+ PG+ I+ Sbjct: 133 ATLMAYHPGAGSLAQRSAGAAWLAPTLGPVDPGRVVVTGGAQTALSALLDYLAAPGDTII 192 Query: 188 AEPLAYPGLLTVAAHLGRRVMAVDVDDEGMRPDLLMTMARRHQARLVYLNPTLQNPTTRT 247 E YPGLL A G ++A +DDEG++P+ L + +H RL+ PT QNPT T Sbjct: 193 VEAFTYPGLLATARRRGLTLVACPLDDEGLQPEALAQLVAQHGPRLICCTPTFQNPTAAT 252 Query: 248 MPATRRAEIAALATRLDLRIIEDDPYWRFAAHAPRPLAHYAPGHVFYVSTLSKCLLPGLR 307 M RRA + +A + I+EDD Y A LA P V++V+T +K L PGLR Sbjct: 253 MSPARRAAVIEIARAAGVTILEDDAYGLLPASPAPALAALWPEGVYHVATTAKALSPGLR 312 Query: 308 TAYVLMPERQAQEEVLGALRSFVLMSTPLMTALSTQWIHDGTAATLLEGIRSEAWARHEL 367 AYV+ P A E AL + M PLM + TQWI DG AA +L G+RSEA AR L Sbjct: 313 LAYVVAPPGCA-EGFAQALHAIAQMPAPLMAGIVTQWIRDGVAAKVLAGVRSEAVARRAL 371 Query: 368 ALRTLGGAGLSAGGGIHLWKALPAHWQGQEFVLKARQSGLNVVSQSSFAVPLEGREPGAD 427 A L A + +H+W A G E AR+ GL +V ++F R PG Sbjct: 372 AATLLPRA-VGDAESLHVWLA------GAEAPPAARERGLALVGANAF------RAPGVT 418 Query: 428 SGGQGACIRISLGRSRSRFELVNALRRLMELAAP 461 G +RISLG + R L L+ L L+AP Sbjct: 419 GEG----LRISLGATAKRAALTQGLKALATLSAP 448 >PA2100 [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Pae Pseudomonas aeruginosa Length = 477 Score = 198 bits (503), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 137/424 (32%), Positives = 211/424 (49%), Gaps = 21/424 (4%) Query: 11 VGRFAANDGP--RYLQIVGFMEQAISDERLRPGDRLPPQRQLAEYLQVDLTTVTRAYGEA 68 + RF +GP +Y ++ +E++I + LR G +LPP R LA+ L V TV+RAYGE Sbjct: 12 IFRFFLPEGPGLKYKRLAQGIEESIRNGVLRQGVKLPPHRILADKLGVTAGTVSRAYGEL 71 Query: 69 RRRHLLEARGSAGTFVAA------------PKVDLSQLI-DLSMNIPPPPAGIDLNDLLR 115 R L+EAR GTFV VD +++ D+S N+ P + +LL Sbjct: 72 ERMGLVEARVGDGTFVRNRGRERAREAGFRNFVDSTEMCNDMSRNMHIPG---NETELLS 128 Query: 116 QGMSQVLIHSDA-DLLMTYHLGGGSSADRAAGAMWMQAMLGPVDEARVLACPGAQSALAA 174 + + Q+ + LM Y G R AGA W+ + ++L G+Q L Sbjct: 129 RSLQQLSAAPELLQELMLYTPDTGLLRHRQAGATWLSHGEFQAEHQQILCVNGSQHGLLV 188 Query: 175 LVLSQTRPGEVILAEPLAYPGLLTVAAHLGRRVMAVDVDDEGMRPDLLMTMARRHQARLV 234 ++++ R G+ ++ E L+YPGL++ A LG +V+ +++D+EG+ PD L R ++ + Sbjct: 189 VLMAMLRAGDTLVTEQLSYPGLISAAQLLGIKVLGLEMDEEGLLPDALEEACRTNRITAL 248 Query: 235 YLNPTLQNPTTRTMPATRRAEIAALATRLDLRIIEDDPYWRFAAHAPRPLAHYAPGHVFY 294 Y PT+QNPTT M RR EIA + L +IED+ + A P PL H P Sbjct: 249 YCTPTIQNPTTAVMSGARRKEIAKICREHGLIVIEDETHAVLMAERPTPLCHLLPERGIL 308 Query: 295 VSTLSKCLLPGLRTAYVLMPERQAQEEVLGALRSFVLMSTPLMTALSTQWIHDGTAATLL 354 + +SK + GLR YV P + ALR+ M+TPL+ ++++W+ DGTA+ LL Sbjct: 309 IGGMSKAVAAGLRVGYVHAPASMVS-RMAAALRNSCWMATPLVLEIASRWVEDGTASALL 367 Query: 355 EGIRSEAWARHELALRTLGGAGLSAGGGI-HLWKALPAHWQGQEFVLKARQSGLNVVSQS 413 E R E R L + L G + H W +PA W+ E R V + Sbjct: 368 EYQRGEIARRQALVVDLLQGLTYRSHLCCPHFWVEVPAPWRAIEIEQGMRGQQHLVTTAE 427 Query: 414 SFAV 417 +F+ Sbjct: 428 AFST 431 >BS_ydeF [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Bsu Bacillus subtilis Length = 465 Score = 177 bits (450), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 124/417 (29%), Positives = 203/417 (48%), Gaps = 9/417 (2%) Query: 8 LAWVGRFAANDGPRYLQIVGFMEQAISDERLRPGDRLPPQRQLAEYLQVDLTTVTRAYGE 67 ++W + P Y + G +EQ I + L PG +LPPQR+LA+YL ++++T+++A+ Sbjct: 14 MSWKPSIDKAEKPIYKALAGQLEQDILNGVLLPGTKLPPQRELADYLDLNVSTISKAFKV 73 Query: 68 ARRRHLLEARGSAGTFVAAPKVDLSQLIDLSMNIPPPPAGIDLND------LLRQGMSQV 121 + LL A +GTFV+ + + L++ + G L D LL Q + + Sbjct: 74 CELKGLLSATVGSGTFVSYDALSNAYLLEDTKPTHLIEMGAILPDHASYEPLLYQ-LKNM 132 Query: 122 LIHSDADLLMTYHLGGGSSADRAAGAMWMQAMLGPVDEARVLACPGAQSALAALVLSQTR 181 + D + +Y G S + A +Q +L G Q+A+AA + S + Sbjct: 133 VHEEDYEKWFSYGRAGESLWQKDAAVKLIQRGGFETSVDHILFANGGQNAIAATLASLCK 192 Query: 182 PGEVILAEPLAYPGLLTVAAHLGRRVMAVDVDDEGMRPDLLMTMARRHQARLVYLNPTLQ 241 PG+ I + YPGL TVA+ L +++ + +++ M P+ L + + +YL P Sbjct: 193 PGDRIGVDHHTYPGLKTVASLLSVQIVPIKSENDEMSPESLEYACKNENIKGLYLIPDYH 252 Query: 242 NPTTRTMPATRRAEIAALATRLDLRIIEDDPYWRFAAHAPRPLAHYAPGHVFYVSTLSKC 301 NPTT M R +A + + +L +IED Y + LA +AP V ++++LSK Sbjct: 253 NPTTSFMSVENRRMVADIVKKYNLFVIEDASYHLLNKNPLPALASFAPQQVIHIASLSKS 312 Query: 302 LLPGLRTAYVLMPERQAQEEVLGALRSFVLMSTPLMTALSTQWIHDGTAATLLEGIRSEA 361 L PGLR AYV +P RQ +E + AL + + +PL+ L+ + I L+E R + Sbjct: 313 LAPGLRLAYVAVP-RQYKEPISKALYNLNITVSPLLAELTARTIVSNQFEVLIESHREQT 371 Query: 362 WARHELALRTLGG-AGLSAGGGIHLWKALPAHWQGQEFVLKARQSGLNVVSQSSFAV 417 R++L R + G L GI W LP G EF A + G+ V + F V Sbjct: 372 IRRNQLVNRYVAGYTCLGVETGIFRWLLLPGKMSGAEFEELAARLGVQVYAAERFVV 428 >mlr7131 [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Mlo Mesorhizobium loti Length = 461 Score = 167 bits (422), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 125/433 (28%), Positives = 206/433 (47%), Gaps = 22/433 (5%) Query: 20 PRYLQIVGFMEQAISDERLRPGDRLPPQRQLAEYLQVDLTTVTRAYGEARRRHLLEARGS 79 P Y + +AI D RL G RLP R+LA+ L + + TV+RAY E RR L+ Sbjct: 14 PAYQSLADQFARAIHDGRLANGARLPTHRRLADDLNLSVQTVSRAYEELIRRGLISGEIG 73 Query: 80 AGTFVAAPKVD---------LSQLIDLSMNIPPPPAGIDLNDLLRQGMSQVLIHSDADLL 130 G+FV + + L ++IDLS+ + P + L + L+Q + + + + Sbjct: 74 RGSFVQTQRREPEPPYLPERLGEVIDLSI-LKPVCEPMHL-ERLKQALGWLAENLPSSSA 131 Query: 131 MTYHLGGGSSADRAAGAMWMQAMLGPVDEARVLACPGAQSALAALVLSQTRPGEVILAEP 190 +++ RA W++ + + GA + + ++S PG + E Sbjct: 132 LSFRPNMVFPRHRAVAVEWLKLCGLDISAQNISLTNGATAGMTVALMSVAPPGSTVATEA 191 Query: 191 LAYPGLLTVAAHLGRRVMAVDVDDEGMRPDLLMTMARRHQARLVYLNPTLQNPTTRTMPA 250 + + L+ +A +LG + + +DD G+ P+ L R R V++ P++ NPT M A Sbjct: 192 IGHHTLVPLARYLGFNLQGLPIDDNGLIPEALDEACRLSDIRAVFVQPSVINPTATLMDA 251 Query: 251 TRRAEIAALATRLDLRIIEDDPYWRFAAHAPRPLAHYAPGHVFYVSTLSKCLLPGLRTAY 310 RR +IAA+A + D+ IIE+D P P+A +AP YV++ +K +PGLR Y Sbjct: 252 QRREQIAAVARKHDIAIIENDVLGPLVEDRPPPVAAFAPERTLYVTSFTKITVPGLRIGY 311 Query: 311 VLMPERQAQEEVLGALRSFVLMSTPLMTALSTQWIHDGTAATLLEGIRSEAWARHELALR 370 + P+R L S M+TPL+ ++T+W+ DGTA L+ R+ R ++A Sbjct: 312 LAAPDRYVAAVANRHLVSN-WMATPLVAEIATKWVTDGTAMELVLWQRAALRRRQDIAAE 370 Query: 371 TLGGAGLSA-GGGIHLWKALPAHWQGQEFVLKARQSGLNVVSQSSFAVPLEGREPGADSG 429 L A G+H+W LP + FV +AR G+ + +SF + P Sbjct: 371 VLARIDYRARRDGLHIWLQLPDDRAEEGFVAQARLQGVAIAPGTSFRISDAPWHP----- 425 Query: 430 GQGACIRISLGRS 442 +RISLG + Sbjct: 426 ----AVRISLGST 434 >SMb20426 [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Sme Sinorhizobium meliloti Length = 426 Score = 164 bits (414), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 134/427 (31%), Positives = 204/427 (47%), Gaps = 23/427 (5%) Query: 43 RLPPQRQLAEYLQVDLTTVTRAYGEARRRHLLEARGSAGTFVAAPKVD---------LSQ 93 RLP R+LA+ L++ + TV+RAY E RR L+ G+FV + L + Sbjct: 2 RLPTHRKLADDLKLSVQTVSRAYDELIRRGLISGEVGRGSFVQTRPREPEPPYLPERLGE 61 Query: 94 LIDLSMNIPPPPAGIDLNDLLRQGMSQVLIHSDADLLMTYHLGGGSSADRAAGAMWMQAM 153 LIDLS+ + P L + RQG + + + +++ R A W+ Sbjct: 62 LIDLSI-LKPVCEQYHLEKM-RQGFAWLAENLPPSSALSFRPNMVFPRHRNVAAEWLLRC 119 Query: 154 LGPVDEARVLACPGAQSALAALVLSQTRPGEVILAEPLAYPGLLTVAAHLGRRVMAVDVD 213 V + GA SA+ ++S PG + E +++ L+ ++ +LG + + +D Sbjct: 120 GLDVSPLNINLTNGATSAMTVALMSVAPPGSTVATEAISHHTLVPLSTYLGIHLQGLAID 179 Query: 214 DEGMRPDLLMTMARRHQARLVYLNPTLQNPTTRTMPATRRAEIAALATRLDLRIIEDDPY 273 +GM PD L R+ R V+L P++ NPT M A RRA +A +A R D+ IIE+D Sbjct: 180 GDGMIPDALDEACRKGVIRAVFLQPSVINPTATLMSAGRRAALAEVARRHDIAIIENDIL 239 Query: 274 WRFAAHAPRPLAHYAPGHVFYVSTLSKCLLPGLRTAYVLMPERQAQEEVLGALRSFVLMS 333 P+A AP YV++ +K +PGLR Y++ P+R L S M+ Sbjct: 240 GPLVEERLPPVAALAPERTLYVTSFTKITVPGLRIGYLVAPDRYVAAVANRHLVSN-WMA 298 Query: 334 TPLMTALSTQWIHDGTAATLLEGIRSEAWARHELALRTLGGAGLSAG-GGIHLWKALPAH 392 TP + ++TQW+ DGTA L+ R ARH +A L G +H+W LP Sbjct: 299 TPAIAEIATQWVSDGTAIELVNWQRRALAARHAIAKEVLASLGHHTHPQSLHVWLPLPEG 358 Query: 393 WQGQEFVLKARQSGLNVVSQSSFAVPLEGREPGADSGGQGACIRISLGRSRSRFELVNAL 452 Q FV +AR G+ + +SF ADSG + A +RISLG S + EL + L Sbjct: 359 HQEDAFVSQARLRGVAIAPGASFRT--------ADSGWRPA-VRISLG-STTEQELKSGL 408 Query: 453 RRLMELA 459 + LA Sbjct: 409 GIVASLA 415 >AGl1192 [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 448 Score = 151 bits (382), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 144/440 (32%), Positives = 204/440 (46%), Gaps = 29/440 (6%) Query: 10 WVGRFAANDGPRYLQIVGFMEQAISDERLRPGDRLPPQRQLAEYLQVDLTTVTRAYGEAR 69 WV R A + ++V + I + RL G RLP R LA L V L TVT+AY Sbjct: 7 WVPRLADIEANAAERLVLALADDIIEGRLTGGARLPAHRDLAWKLGVGLGTVTKAYAVLE 66 Query: 70 RRHLLEARGSAGTFVAAPKVDLSQLIDLSMNIPPPPAGIDLN-DLLRQGMSQVLIHSDAD 128 RR L + GTFVA + + IDLS N PP LN +L + ++ + DAD Sbjct: 67 RRGLTRSVKGRGTFVALQEAHNDRQIDLSSNAPPAT----LNARILAKTLTGIARKIDAD 122 Query: 129 LLMTYHLGGGSSADRAAGAMWMQAMLGPVDEARVLACPGAQSALA-ALVLSQTRPGEVIL 187 Y G R A W+ VD + ++ GA+ AL+ A L+ + G ++L Sbjct: 123 HFNLYAPPVGHVEHRRVLARWLATQALSVDPSHLVLTSGARQALSLAFDLTCGKDG-LLL 181 Query: 188 AEPLAYPGLLTVAAHLGRRVMAVDVDDEGMRPDLL---MTMARRHQARLVYLNPTLQNPT 244 E + YPG L + G RV V++D EGM P+ L + + R +YL PTL NPT Sbjct: 182 TERITYPGALALLRRKGCRVRGVEIDAEGMVPEALAEALAGMKPGGVRAIYLTPTLHNPT 241 Query: 245 TRTMPATRRAEIAALATRLDLRIIEDDPYWRFAAHAP--RPLAHYAPGHVFYVSTLSKCL 302 T TM RR I + R IIED Y AA P PLA AP F+V+ LSK L Sbjct: 242 TATMGMARRHAIVDICRRAGAWIIEDGVY---AASDPGFSPLAALAPDISFHVNGLSKSL 298 Query: 303 LPGLRTAYVLMPERQAQEEVLGALRSFVLMSTPLMTALSTQWIHDGTAATLLEGIRSEAW 362 PGL+ + +P Q ++ L+ + + L A+ W+ +++ +R EA Sbjct: 299 GPGLQIGVLALPAGQ-KDAAENFLQDAPMAPSALSCAVVEDWLTTDVISSIQRDLRHEAR 357 Query: 363 ARHELALRTLGGAGL-SAGGGIHLWKALPAH-WQGQEFVLKARQSGLNVVSQSSFAVPLE 420 R LA+ LG + L S ++W LP ++FV A SG+ + + S Sbjct: 358 RRSSLAVSLLGASELVSHPDAYNVW--LPMQRAASKDFVSAAAASGIRLTAPDSMM---- 411 Query: 421 GREPGADSGGQGACIRISLG 440 AD+ Q + IR LG Sbjct: 412 -----ADTEDQASGIRFCLG 426 >AGc3389 [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 472 Score = 148 bits (373), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 138/474 (29%), Positives = 211/474 (44%), Gaps = 41/474 (8%) Query: 10 WVGRFAANDGPRYLQIVGFMEQAISDERLRPGDRLPPQRQLAEYLQVDLTTVTRAYGEAR 69 W+ DGP YL++ +E AISD L+ G +LPPQR LA L V + T++RAYG Sbjct: 4 WLPDITEGDGPIYLRLADSIEGAISDGILQAGSKLPPQRNLAYDLGVTIGTISRAYGLIH 63 Query: 70 RRHLLEARGSAGTFVAAPKVDLSQLIDLSMNIPPPPA------GIDLNDLLRQGMS---- 119 R L+ GT+V K LS P A +D + R + Sbjct: 64 ERGLVSGEVGRGTYVNERKTPAP----LSPEEPSVSAFGGTRYALDTSAEFRLNTTAAPD 119 Query: 120 ---QVLIHSDADLLMTYHLGGGSSADRA-------AGAMWM-QAMLGPVDEARVLACPGA 168 VL+ + L H S+ R AGA W+ Q P E +++ GA Sbjct: 120 VGQSVLVGKHVEALAREHPFEISNYTRTFPDNWCMAGARWLSQNGWSPKPE-NIVSTLGA 178 Query: 169 QSALAALVLSQTRPGEVILAEPLAYPGLLTVAAHLGRRVMAVDVDDEGMRPDLLMTMARR 228 + + ++V + T PG+ I+ EP+ Y + A GRRV V+VD++G+ PD + + Sbjct: 179 HAGVMSVVTAMTAPGDRIVFEPVTYSHISRSATLAGRRVTLVEVDEKGIVPDDFERVCAQ 238 Query: 229 HQARLVYLNPTLQNPTTRTMPATRRAEIAALATRLDLRIIEDDPYWRFAAHAPRPLAHYA 288 ++++L QNPT T+P RR IA +A R + I+ED+ Y A +A +A Sbjct: 239 QHPKMIFLMSAGQNPTCATLPEDRRRAIADIARRYGVWIVEDNLYGAMTREAIPLIAEFA 298 Query: 289 PGHVFYVSTLSKCLLPGLRTAYVLMPERQAQEEVLGALRSFVLMSTPLMTA-LSTQWIHD 347 P F V LSK + G+R +V P + + + S + P M A L+ + ++ Sbjct: 299 PDITFVVGGLSKSVAAGVRGGWVACPAQFSSR--IRISHSMLTGGLPFMLAELNARLVNS 356 Query: 348 GTAATLLEGIRSEAWARHELALRTLGGAGLSAGGGI-HLWKALPAHWQGQEFVLKARQSG 406 G A + + +E R +A R G ++ I +W LP W F A + G Sbjct: 357 GDADDIRKDCIAEINEREAIARRIFAGLEFNSLPDIAFMWLRLPEPWLSGTFRNAAMKEG 416 Query: 407 LNVVSQSSFAVPLEGREPGADSGGQGACIRISLGRSRSRFELVNA---LRRLME 457 + + + F GR S +RIS SR EL +A LR L++ Sbjct: 417 VLIDDEDEFKA---GR-----SEKVFHRVRISFSGPSSREELTHAFGILRNLLD 462 >AGl244 [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 482 Score = 130 bits (328), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 120/431 (27%), Positives = 186/431 (43%), Gaps = 34/431 (7%) Query: 38 LRPGDRLPPQRQLAEYLQVDLTTVTRAYGEARRRHLLEARGSAGTFVAAPKVDL------ 91 L+P DR+P R LA L + + TV+ +Y EA R L GTFV + Sbjct: 50 LKPMDRMPTHRDLARELGLSVQTVSLSYKEAERLGYLSGEIGRGTFVKTRVTERAGRMML 109 Query: 92 ----SQLIDLSMNIPPPPAGIDLNDLLRQGMSQVLIHSDAD-----LLMTYHLGGGSSAD 142 ++++DLS+ G+ L+D + S+ ++ AD + G + Sbjct: 110 DHSPTEVLDLSI-----IRGVYLDD--HENASRTILREMADSDNSGFMRPCRPVAGLDSH 162 Query: 143 RAAGAMWMQAMLGPVDEARVLACPGAQSALAALVLSQTRPGEVILAEPLAYPGLLTVAAH 202 R W+ M R+L GA + + R +V+L E L G++ ++ Sbjct: 163 RETARTWLGMMGVTAGAERILVTNGAAHGIFLALSCIIRSNDVVLCENLTDHGIIGLSNI 222 Query: 203 LGRRVMAVDVDDEGMRPDLLMTMARRHQARLVYLNPTLQNPTTRTMPATRRAEIAALATR 262 LG + + D+EG+ PD L R + L PTL NPT A RR IA +A R Sbjct: 223 LGFSLKGLPTDEEGILPDALEAACAAGGVRALVLIPTLNNPTGHVSGAARRQAIATIAER 282 Query: 263 LDLRIIEDDPYWRFAAHAPRPLAHYAPGHVFYVSTLSKCLLPGLRTAYVLMPERQAQEEV 322 + IIED+ Y + P F+V++ +K +L GLR Y+++P + Sbjct: 283 YGIFIIEDEVYRPMIEDDLPSITEMLPDLGFFVTSFTKTVLTGLRVGYLVVPPAYSIRAA 342 Query: 323 LGALRSFVLMSTPLMTALSTQWIHDGTAATLLEGIRSEAWARHELALRTLGG-AGLSAGG 381 LR T L ++T+W+ +GTA LL+ R+EA AR ++A+ LG G + Sbjct: 343 -SILRVSSWSGTYLTAEIATRWVENGTARRLLDVQRTEARARQKIAVDILGDHIGSTHPL 401 Query: 382 GIHLWKALPAHWQGQEFVLKARQSGLNVVSQSSFAVPLEGREPGADSGGQGACIRISLGR 441 W +P W + GL V + ++ V + EP G G IRI LG Sbjct: 402 SFCAWLTVPPRWT---------EDGL-VRALTNQNVAVTPSEPFIAGPGHGGGIRICLGG 451 Query: 442 SRSRFELVNAL 452 + L AL Sbjct: 452 RLNHASLARAL 462