BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0138.p (667 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CC1772 [C] COG0843 Heme/copper-type cytochrome/quinol oxidases, ... 1105 0.0 mlr6847 [C] COG0843 Heme/copper-type cytochrome/quinol oxidases,... 1066 0.0 AGc227 [C] COG0843 Heme/copper-type cytochrome/quinol oxidases, ... 1063 0.0 SMb21488 [C] COG0843 Heme/copper-type cytochrome/quinol oxidases... 1053 0.0 BMEI1900 [C] COG0843 Heme/copper-type cytochrome/quinol oxidases... 940 0.0 cyoB [C] COG0843 Heme/copper-type cytochrome/quinol oxidases, su... 924 0.0 ZcyoB [C] COG0843 Heme/copper-type cytochrome/quinol oxidases, s... 924 0.0 ECs0485 [C] COG0843 Heme/copper-type cytochrome/quinol oxidases,... 924 0.0 RSc2916 [C] COG0843 Heme/copper-type cytochrome/quinol oxidases,... 921 0.0 STM0442 [C] COG0843 Heme/copper-type cytochrome/quinol oxidases,... 912 0.0 >CC1772 [C] COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 Ccr Caulobacter vibrioides Length = 665 Score = 1105 bits (2857), Expect = 0.0, Method: Compositional matrix adjust. Identities = 534/660 (80%), Positives = 594/660 (90%) Query: 6 DLIKLIFGRLSLEAIPYHEPILIGTFAMVALGGIVVLGLLTKYRLWGMLWRDWFTSIDHK 65 DL++ IFGRL+ +AIP H+PIL+ TFA+VALGG+ VL LLT+Y+LWG LWR+W TS+DHK Sbjct: 4 DLVQFIFGRLTWDAIPLHDPILLVTFAVVALGGVTVLALLTRYKLWGYLWREWLTSVDHK 63 Query: 66 RIGIMYIVLAIVMLLRGFADAVMMRAQQAIAFGDNAGFLPPHHYDQVFTAHGVIMIFFVA 125 +IG+MYI+LA++MLLRGFADA+MMRAQQA+AFGD G+LPP HYDQ+FTAHGVIMIFFVA Sbjct: 64 KIGVMYIILALIMLLRGFADALMMRAQQAMAFGDATGYLPPEHYDQIFTAHGVIMIFFVA 123 Query: 126 MPLVTGLMNYVVPLQIGARDVAFPFLNNFSFWMTTFGALLVMASLFVGEFARTGWLAYPP 185 MPLVTGLMN VVPLQIGARDV+FPFLNNFSFWMT GA+LVMASLFVGEFARTGWLAYPP Sbjct: 124 MPLVTGLMNLVVPLQIGARDVSFPFLNNFSFWMTVGGAVLVMASLFVGEFARTGWLAYPP 183 Query: 186 LSGILYSPDVGVDYYIWALQVAGVGTLLSGINLVVTIVKMRAPGMNMMKMPVFTWTSLCT 245 LS I YSP VGVDYYIWALQ+AGVGTLLSGINLVVTIVKMRAPGM++MKMPVFTWT+LCT Sbjct: 184 LSNIAYSPGVGVDYYIWALQIAGVGTLLSGINLVVTIVKMRAPGMSLMKMPVFTWTALCT 243 Query: 246 NVLIVAAFPVLTAVLAMLSLDRVFGTNFFTNDMGGNAMMYVNLIWIWGHPEVYILVLPAF 305 NVLIVAAFP+LTAVL +LS DR GTNFFTND GGN MMYVNLIWIWGHPEVYIL+LPAF Sbjct: 244 NVLIVAAFPILTAVLGLLSADRYLGTNFFTNDFGGNPMMYVNLIWIWGHPEVYILILPAF 303 Query: 306 GIFSEIVSTFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMII 365 G+FSE+VSTF KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGASVN+FFGITTMII Sbjct: 304 GVFSEVVSTFCRKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGASVNAFFGITTMII 363 Query: 366 SIPTGAKIFNWLFTMYRGRIRFEVPMLWTIGFMVTFVIGGMTGVLLAVPPADFVLHNSLF 425 SIPTGAKIFNWLFTMYRGRIRFEVPMLWT+GFMVTFVIGGMTGVLLA+PPADFVLHNSLF Sbjct: 364 SIPTGAKIFNWLFTMYRGRIRFEVPMLWTVGFMVTFVIGGMTGVLLAIPPADFVLHNSLF 423 Query: 426 LIAHFHNVIIGGVVFGMFAGINFWFPKAFGFKLNEFWGKCSFWFWLVGFYLAFMPLYVLG 485 LIAHFHNVIIGGVVFGMFAGI +WFPKAFGF+L+ FWGK SFWFWL GFY AFMPLYVLG Sbjct: 424 LIAHFHNVIIGGVVFGMFAGIVYWFPKAFGFRLDPFWGKLSFWFWLSGFYFAFMPLYVLG 483 Query: 486 LMGVTRRMSHFDDPSLQIWFVVAAIGAGLIALGIGSFIIQIAVSIRDRKKLADVTGDPWN 545 LMGVTRR+SHF+DPSLQIWFV+AA GA LI LGI +FI+QI VSIR+R+ L D TGDPW+ Sbjct: 484 LMGVTRRVSHFEDPSLQIWFVIAAFGAVLILLGIIAFIVQIVVSIRNREALRDETGDPWD 543 Query: 546 GRTLEWSTSSPPPAYNFAFTPVVHDNDAWADMKKNKYQRPLGDFVEIHMPKNTGAGFIIA 605 GRTLEWSTSSPPPAYNFAFTP+VHD DAW DMK+ Y RP F+ IHMP NTGAG ++A Sbjct: 544 GRTLEWSTSSPPPAYNFAFTPMVHDLDAWWDMKQRGYVRPTSGFIPIHMPANTGAGVVLA 603 Query: 606 ALSAVLGFTLIWHMWLPAVATFVVLVAATIIHTFNYNRDYYIPADEVVRVEAERTRLLNS 665 LS V GF +IWH+W AV +F+ LV A I HTFN+ RDYYIPA+EVVRVE RT L S Sbjct: 604 GLSVVCGFAMIWHIWWLAVLSFIALVGAAIAHTFNFKRDYYIPAEEVVRVEDARTEALRS 663 >mlr6847 [C] COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 Mlo Mesorhizobium loti Length = 665 Score = 1066 bits (2757), Expect = 0.0, Method: Compositional matrix adjust. Identities = 517/660 (78%), Positives = 580/660 (87%) Query: 7 LIKLIFGRLSLEAIPYHEPILIGTFAMVALGGIVVLGLLTKYRLWGMLWRDWFTSIDHKR 66 L K IFGRL+ +++P HEPI++ TF VALGGI +LG++T ++LW LWR+WFTS+DHK+ Sbjct: 5 LTKFIFGRLTWDSLPLHEPIVVATFVAVALGGIALLGVVTYFKLWTYLWREWFTSVDHKK 64 Query: 67 IGIMYIVLAIVMLLRGFADAVMMRAQQAIAFGDNAGFLPPHHYDQVFTAHGVIMIFFVAM 126 IGIMY+VL +VMLLRGF+DA+MMR QQA+AF + G+L HHYDQ+FTAHGVIMIFFVAM Sbjct: 65 IGIMYMVLGLVMLLRGFSDAIMMRLQQAMAFNGSEGYLNSHHYDQIFTAHGVIMIFFVAM 124 Query: 127 PLVTGLMNYVVPLQIGARDVAFPFLNNFSFWMTTFGALLVMASLFVGEFARTGWLAYPPL 186 P VTGLMN+VVPLQIGARDV+FPFLNNFSFWMT GA+LVMASLFVGEFARTGWLAYPPL Sbjct: 125 PFVTGLMNFVVPLQIGARDVSFPFLNNFSFWMTVGGAILVMASLFVGEFARTGWLAYPPL 184 Query: 187 SGILYSPDVGVDYYIWALQVAGVGTLLSGINLVVTIVKMRAPGMNMMKMPVFTWTSLCTN 246 SGI YSPDVGVDYYIWALQVAGVGT LSGINL+ TI+KMRAPGM MM+MPVFTWTSLCTN Sbjct: 185 SGIGYSPDVGVDYYIWALQVAGVGTTLSGINLICTIIKMRAPGMTMMRMPVFTWTSLCTN 244 Query: 247 VLIVAAFPVLTAVLAMLSLDRVFGTNFFTNDMGGNAMMYVNLIWIWGHPEVYILVLPAFG 306 VLIVA+FPVLTAVL++L+LDR GTNFFTND GGN MMYVNLIWIWGHPEVYIL+LP FG Sbjct: 245 VLIVASFPVLTAVLSLLALDRYVGTNFFTNDFGGNPMMYVNLIWIWGHPEVYILILPLFG 304 Query: 307 IFSEIVSTFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIIS 366 +FSE+ STFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIIS Sbjct: 305 VFSEVTSTFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIIS 364 Query: 367 IPTGAKIFNWLFTMYRGRIRFEVPMLWTIGFMVTFVIGGMTGVLLAVPPADFVLHNSLFL 426 IPTGAKIFNWLFTMYRGRIRFE+PM+WT+ FM+TFV+GGMTGVLLAVPPADFVLHNSLFL Sbjct: 365 IPTGAKIFNWLFTMYRGRIRFELPMMWTMAFMLTFVVGGMTGVLLAVPPADFVLHNSLFL 424 Query: 427 IAHFHNVIIGGVVFGMFAGINFWFPKAFGFKLNEFWGKCSFWFWLVGFYLAFMPLYVLGL 486 IAHFHNVIIGGV+FG+FAGI +W+PKAFGFKL+ FWGK SFW W+VGF+ AFMPLY+LGL Sbjct: 425 IAHFHNVIIGGVLFGLFAGIAYWWPKAFGFKLDPFWGKVSFWCWVVGFWFAFMPLYILGL 484 Query: 487 MGVTRRMSHFDDPSLQIWFVVAAIGAGLIALGIGSFIIQIAVSIRDRKKLADVTGDPWNG 546 MGVTRRM FDDPSLQIWFV+AA GA LIA GI +F+IQI VSIR R+ L D TGDPW+G Sbjct: 485 MGVTRRMRVFDDPSLQIWFVIAAFGAVLIAFGIAAFLIQIFVSIRKREALTDPTGDPWDG 544 Query: 547 RTLEWSTSSPPPAYNFAFTPVVHDNDAWADMKKNKYQRPLGDFVEIHMPKNTGAGFIIAA 606 RTLEWSTSSPPPAYNFAFTPVV DNDAW DMKK Y RPL F IHMP NTG G I+AA Sbjct: 545 RTLEWSTSSPPPAYNFAFTPVVRDNDAWWDMKKAGYTRPLSGFKPIHMPSNTGTGVILAA 604 Query: 607 LSAVLGFTLIWHMWLPAVATFVVLVAATIIHTFNYNRDYYIPADEVVRVEAERTRLLNSH 666 S LGF LIW++W A +FV L+A I HTFNY+RD++IPA EV + E RT LL + Sbjct: 605 FSVALGFGLIWYIWWLAALSFVCLIATAIGHTFNYHRDFHIPAAEVTQTEVARTTLLAAQ 664 >AGc227 [C] COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 667 Score = 1063 bits (2749), Expect = 0.0, Method: Compositional matrix adjust. Identities = 516/663 (77%), Positives = 586/663 (88%) Query: 4 NFDLIKLIFGRLSLEAIPYHEPILIGTFAMVALGGIVVLGLLTKYRLWGMLWRDWFTSID 63 N D +FG+L+ E+IP HEPIL+ TFA VALGGIVV+G LT +RLWG LW +WFTSID Sbjct: 4 NSDQTSFLFGKLTWESIPLHEPILVATFAAVALGGIVVVGALTYFRLWGYLWNEWFTSID 63 Query: 64 HKRIGIMYIVLAIVMLLRGFADAVMMRAQQAIAFGDNAGFLPPHHYDQVFTAHGVIMIFF 123 HK+IGIMYI+LA+VMLLRGFADA+MMR QQAIA G + G+LPPHHYDQ+FTAHGVIMIFF Sbjct: 64 HKKIGIMYIILALVMLLRGFADAIMMRVQQAIASGGSEGYLPPHHYDQIFTAHGVIMIFF 123 Query: 124 VAMPLVTGLMNYVVPLQIGARDVAFPFLNNFSFWMTTFGALLVMASLFVGEFARTGWLAY 183 +AMP++TGLMN+VVPLQIGARDV+FPFLNNFSFWMTT GA++ M SLFVGE+A+TGWLAY Sbjct: 124 MAMPMITGLMNFVVPLQIGARDVSFPFLNNFSFWMTTAGAIITMISLFVGEYAQTGWLAY 183 Query: 184 PPLSGILYSPDVGVDYYIWALQVAGVGTLLSGINLVVTIVKMRAPGMNMMKMPVFTWTSL 243 PPLSGI SP VGVDYYIW LQ+AGVGT LSGINL+VTI+KMRAPGM MM+MP+F WTSL Sbjct: 184 PPLSGIDGSPGVGVDYYIWGLQIAGVGTTLSGINLIVTIIKMRAPGMTMMRMPIFVWTSL 243 Query: 244 CTNVLIVAAFPVLTAVLAMLSLDRVFGTNFFTNDMGGNAMMYVNLIWIWGHPEVYILVLP 303 C+N+LIVA+FP+LTA LA+L+LDR GTNFFTND+GGN MMYVNLIWIWGHPEVYILVLP Sbjct: 244 CSNILIVASFPILTATLALLTLDRYAGTNFFTNDLGGNPMMYVNLIWIWGHPEVYILVLP 303 Query: 304 AFGIFSEIVSTFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTM 363 AFGIFSEIV+TFSGKRLFGY SMVYAT VITILSYLVWLHHFFTMGSGA+VN+FFGITTM Sbjct: 304 AFGIFSEIVATFSGKRLFGYASMVYATAVITILSYLVWLHHFFTMGSGANVNAFFGITTM 363 Query: 364 IISIPTGAKIFNWLFTMYRGRIRFEVPMLWTIGFMVTFVIGGMTGVLLAVPPADFVLHNS 423 IISIPTGAKIFNWLFTMY+GRI+F+VPMLWTIGFM+TFVIGGMTGVLLAVPPADFVLHNS Sbjct: 364 IISIPTGAKIFNWLFTMYKGRIKFDVPMLWTIGFMITFVIGGMTGVLLAVPPADFVLHNS 423 Query: 424 LFLIAHFHNVIIGGVVFGMFAGINFWFPKAFGFKLNEFWGKCSFWFWLVGFYLAFMPLYV 483 LFLIAHFHN IIGGVVFG+ AGI +WFPKAFG++L+ FWGK SFWFW +GFY AFMPLY+ Sbjct: 424 LFLIAHFHNTIIGGVVFGVLAGIVYWFPKAFGYRLDPFWGKLSFWFWFIGFYFAFMPLYI 483 Query: 484 LGLMGVTRRMSHFDDPSLQIWFVVAAIGAGLIALGIGSFIIQIAVSIRDRKKLADVTGDP 543 LGLMG+TRR+S F+D SLQIWFV+AA GA LIALGI SFIIQ+ VS R +L DVTGDP Sbjct: 484 LGLMGITRRISQFEDNSLQIWFVIAAFGAFLIALGIASFIIQLIVSFLKRDQLRDVTGDP 543 Query: 544 WNGRTLEWSTSSPPPAYNFAFTPVVHDNDAWADMKKNKYQRPLGDFVEIHMPKNTGAGFI 603 +N RTLEWSTSSPPP YNFAFTPV+HD DAW DMKK Y RPL F+ IHMPKNTGAG I Sbjct: 544 YNARTLEWSTSSPPPQYNFAFTPVIHDVDAWHDMKKRGYSRPLDGFIPIHMPKNTGAGVI 603 Query: 604 IAALSAVLGFTLIWHMWLPAVATFVVLVAATIIHTFNYNRDYYIPADEVVRVEAERTRLL 663 I+A+S VLGF L+WH+W A +F+ ++A +I HTFNYNRDYYIPA +V VEAERT+LL Sbjct: 604 ISAISVVLGFALVWHIWWLAALSFIGVIAVSIAHTFNYNRDYYIPASDVSTVEAERTKLL 663 Query: 664 NSH 666 Sbjct: 664 AKQ 666 >SMb21488 [C] COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 Sme Sinorhizobium meliloti Length = 669 Score = 1053 bits (2724), Expect = 0.0, Method: Compositional matrix adjust. Identities = 514/667 (77%), Positives = 582/667 (87%) Query: 1 MSDNFDLIKLIFGRLSLEAIPYHEPILIGTFAMVALGGIVVLGLLTKYRLWGMLWRDWFT 60 M + D +KLIFGRL+L+AIPYHEPIL+ TF VALGGI ++GL+T YR WG LWRDW T Sbjct: 1 MFSDPDFLKLIFGRLTLDAIPYHEPILVVTFLAVALGGIALIGLITYYRFWGTLWRDWLT 60 Query: 61 SIDHKRIGIMYIVLAIVMLLRGFADAVMMRAQQAIAFGDNAGFLPPHHYDQVFTAHGVIM 120 S+DHK+IGIMYI+LA+VMLLRGF+DA+MMR QQA+AFG + G+LPPHHYDQVFTAHGVIM Sbjct: 61 SVDHKKIGIMYIILALVMLLRGFSDAIMMRLQQAMAFGGSEGYLPPHHYDQVFTAHGVIM 120 Query: 121 IFFVAMPLVTGLMNYVVPLQIGARDVAFPFLNNFSFWMTTFGALLVMASLFVGEFARTGW 180 IFF+AMP VTGLMN+VVPLQIGARDV+FPFLNNFSFWMTT GA+++M SLFVGEFARTGW Sbjct: 121 IFFMAMPFVTGLMNFVVPLQIGARDVSFPFLNNFSFWMTTAGAIIIMLSLFVGEFARTGW 180 Query: 181 LAYPPLSGILYSPDVGVDYYIWALQVAGVGTLLSGINLVVTIVKMRAPGMNMMKMPVFTW 240 LAYPPLSG YSP VGVDYY+W LQ+AG+GT LSGINL+ TIVKMRAPGM MMKMPVFTW Sbjct: 181 LAYPPLSGADYSPGVGVDYYVWGLQIAGIGTTLSGINLIATIVKMRAPGMTMMKMPVFTW 240 Query: 241 TSLCTNVLIVAAFPVLTAVLAMLSLDRVFGTNFFTNDMGGNAMMYVNLIWIWGHPEVYIL 300 TSLCTNVLIVA FPVLTA LA+L+LDR GTNFFTND+GGN MMYVNLIWIWGHPEVYIL Sbjct: 241 TSLCTNVLIVATFPVLTATLALLTLDRYAGTNFFTNDLGGNPMMYVNLIWIWGHPEVYIL 300 Query: 301 VLPAFGIFSEIVSTFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGI 360 +LPAFGIFSE+V+TF GKRLFGY SMVYATVVITILSY+VWLHHFFTMGSGASVN+FFGI Sbjct: 301 ILPAFGIFSEVVATFCGKRLFGYASMVYATVVITILSYIVWLHHFFTMGSGASVNAFFGI 360 Query: 361 TTMIISIPTGAKIFNWLFTMYRGRIRFEVPMLWTIGFMVTFVIGGMTGVLLAVPPADFVL 420 TTMIISIPTGAK+FNWLFTMYRGRIR+EVPMLWTIGFMVTFV+GGMTGVLLAVPPADFVL Sbjct: 361 TTMIISIPTGAKMFNWLFTMYRGRIRYEVPMLWTIGFMVTFVLGGMTGVLLAVPPADFVL 420 Query: 421 HNSLFLIAHFHNVIIGGVVFGMFAGINFWFPKAFGFKLNEFWGKCSFWFWLVGFYLAFMP 480 HNSLFLIAHFHNVIIGGVVFG+ AG+ +WFPKAFGF+L+ FWGK SFWFWL GFY AFMP Sbjct: 421 HNSLFLIAHFHNVIIGGVVFGLMAGVVYWFPKAFGFRLDPFWGKMSFWFWLTGFYFAFMP 480 Query: 481 LYVLGLMGVTRRMSHFDDPSLQIWFVVAAIGAGLIALGIGSFIIQIAVSIRDRKKLADVT 540 LYVLGLMGVTRR+S F+DPSLQIWFV+AA GA LIALGI S +IQ+ VS R++L D T Sbjct: 481 LYVLGLMGVTRRVSQFEDPSLQIWFVIAAFGAFLIALGILSMLIQLVVSFVRREELRDTT 540 Query: 541 GDPWNGRTLEWSTSSPPPAYNFAFTPVVHDNDAWADMKKNKYQRPLGDFVEIHMPKNTGA 600 GDPW+GRTLEWST+SPPP YNFAFTP+VHD D+W DMKK + RPL F IHMPKNTG Sbjct: 541 GDPWDGRTLEWSTASPPPDYNFAFTPLVHDQDSWWDMKKRGHSRPLVGFKPIHMPKNTGT 600 Query: 601 GFIIAALSAVLGFTLIWHMWLPAVATFVVLVAATIIHTFNYNRDYYIPADEVVRVEAERT 660 G I+ A+S V F ++W+MW + +FV + A I HTFNY+RD++IPA+ V E +RT Sbjct: 601 GVILGAISVVFAFAMVWYMWWLVILSFVAMAAIAIGHTFNYDRDFHIPANVVADTEGKRT 660 Query: 661 RLLNSHV 667 L V Sbjct: 661 EALAPEV 667 >BMEI1900 [C] COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 Bme Brucella melitensis Length = 659 Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/657 (70%), Positives = 544/657 (82%), Gaps = 1/657 (0%) Query: 11 IFGRLSLEAIPYHEPILIGTFAMVALGGIVVLGLLTKYRLWGMLWRDWFTSIDHKRIGIM 70 +FG+L+LEAIPYHEPI++ T A VA G + +L +T YR W LW DW TS+DHKRIG+M Sbjct: 1 MFGKLTLEAIPYHEPIIMVTLAAVAGGALAILAAITYYRKWVPLWNDWLTSVDHKRIGVM 60 Query: 71 YIVLAIVMLLRGFADAVMMRAQQAIAFGDNAGFLPPHHYDQVFTAHGVIMIFFVAMPLVT 130 YIVLA+VML RGF+DAVMMRAQQA+A G N GFLPPHHYDQ+FTAHGVIMIFFVAMP + Sbjct: 61 YIVLALVMLFRGFSDAVMMRAQQALASGANEGFLPPHHYDQIFTAHGVIMIFFVAMPFIV 120 Query: 131 GLMNYVVPLQIGARDVAFPFLNNFSFWMTTFGALLVMASLFVGEFARTGWLAYPPLSGIL 190 GLMN+VVPLQIGARDVAFP+LN+ SFW+T GA+LV SL VGEFA+TGWLAYPPLSG Sbjct: 121 GLMNFVVPLQIGARDVAFPYLNSLSFWLTVAGAILVNISLGVGEFAKTGWLAYPPLSGKA 180 Query: 191 YSPDVGVDYYIWALQVAGVGTLLSGINLVVTIVKMRAPGMNMMKMPVFTWTSLCTNVLIV 250 +SPDVG+DYY+WAL ++G+GTLLS +NL+ TI+KMRAPGM MM++PVFTWT+LC+NVLIV Sbjct: 181 FSPDVGMDYYLWALNISGMGTLLSAVNLITTIIKMRAPGMGMMQLPVFTWTALCSNVLIV 240 Query: 251 AAFPVLTAVLAMLSLDRVFGTNFFTNDMGGNAMMYVNLIWIWGHPEVYILVLPAFGIFSE 310 AAFP+LT L++L+LDR +FFTND GGN MMYVNLIWIWGHPEVYILVLP FGI+SE Sbjct: 241 AAFPILTVTLSLLTLDRYLDFHFFTNDAGGNPMMYVNLIWIWGHPEVYILVLPCFGIYSE 300 Query: 311 IVSTFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTG 370 I++TFSGKRLFGYTSMVYATV IT+LS+LVW HHFFTMG GASVNSFFG+ TMIISIPTG Sbjct: 301 IIATFSGKRLFGYTSMVYATVAITVLSFLVWAHHFFTMGGGASVNSFFGVATMIISIPTG 360 Query: 371 AKIFNWLFTMYRGRIRFEVPMLWTIGFMVTFVIGGMTGVLLAVPPADFVLHNSLFLIAHF 430 AK+FNWLFTMY+GR+R E P++WTIGFM TFVIGGMTGVLLAVPPADFVLHNS+FLIAHF Sbjct: 361 AKVFNWLFTMYKGRVRMETPVMWTIGFMCTFVIGGMTGVLLAVPPADFVLHNSVFLIAHF 420 Query: 431 HNVIIGGVVFGMFAGINFWFPKAFGFKLNEFWGKCSFWFWLVGFYLAFMPLYVLGLMGVT 490 HNVII GV+FG FAG+ +W+PKAFGFKLNE GK +FW WLVGF LAFMPLYVLGLMG+T Sbjct: 421 HNVIISGVLFGCFAGVVYWWPKAFGFKLNERLGKNAFWCWLVGFMLAFMPLYVLGLMGMT 480 Query: 491 RRMSHFDDPSLQIWFVVAAIGAGLIALGIGSFIIQIAVSIRDRKKLADVTGDPW-NGRTL 549 RR++H ++P+ I+ ++AAIG +I GI I+QI VSIRDR KL D GD W +GRTL Sbjct: 481 RRLNHTENPAWHIYLIIAAIGVAVILCGIVCQILQIMVSIRDRDKLRDTNGDTWGSGRTL 540 Query: 550 EWSTSSPPPAYNFAFTPVVHDNDAWADMKKNKYQRPLGDFVEIHMPKNTGAGFIIAALSA 609 EWS SSPPP YNFA TP V D+DAW DMK+N Y R F IHMPKNT GF++ LS Sbjct: 541 EWSISSPPPFYNFAETPTVRDHDAWWDMKQNGYVRRTEKFARIHMPKNTATGFLVGILSI 600 Query: 610 VLGFTLIWHMWLPAVATFVVLVAATIIHTFNYNRDYYIPADEVVRVEAERTRLLNSH 666 GF +IWH+W A+A+ + + I H+FN +RDYY+ ADEV RVE RTR L + Sbjct: 601 PFGFAMIWHIWWLAIASALAMFVVAIAHSFNNDRDYYVSADEVQRVEDARTRQLTAQ 657 >cyoB [C] COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 Eco Escherichia coli K12 Length = 663 Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/651 (67%), Positives = 538/651 (82%), Gaps = 3/651 (0%) Query: 11 IFGRLSLEAIPYHEPILIGTFAMVALGGIVVLGLLTKYRLWGMLWRDWFTSIDHKRIGIM 70 +FG+LSL+A+P+HEPI++ T A + LGG+ ++GL+T + W LW++W TS+DHKR+GIM Sbjct: 1 MFGKLSLDAVPFHEPIVMVTIAGIILGGLALVGLITYFGKWTYLWKEWLTSVDHKRLGIM 60 Query: 71 YIVLAIVMLLRGFADAVMMRAQQAIAFGDNAGFLPPHHYDQVFTAHGVIMIFFVAMPLVT 130 YI++AIVMLLRGFADA+MMR+QQA+A AGFLPPHHYDQ+FTAHGVIMIFFVAMP V Sbjct: 61 YIIVAIVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVI 120 Query: 131 GLMNYVVPLQIGARDVAFPFLNNFSFWMTTFGALLVMASLFVGEFARTGWLAYPPLSGIL 190 GLMN VVPLQIGARDVAFPFLNN SFW T G +LV SL VGEFA+TGWLAYPPLSGI Sbjct: 121 GLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIE 180 Query: 191 YSPDVGVDYYIWALQVAGVGTLLSGINLVVTIVKMRAPGMNMMKMPVFTWTSLCTNVLIV 250 YSP VGVDY+IW+LQ++G+GT L+GIN VTI+KMRAPGM M KMPVFTW SLC NVLI+ Sbjct: 181 YSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLII 240 Query: 251 AAFPVLTAVLAMLSLDRVFGTNFFTNDMGGNAMMYVNLIWIWGHPEVYILVLPAFGIFSE 310 A+FP+LT +A+L+LDR GT+FFTNDMGGN MMY+NLIW WGHPEVYIL+LP FG+FSE Sbjct: 241 ASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSE 300 Query: 311 IVSTFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTG 370 I +TFS KRLFGYTS+V+ATV IT+LS++VWLHHFFTMG+GA+VN+FFGITTMII+IPTG Sbjct: 301 IAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTG 360 Query: 371 AKIFNWLFTMYRGRIRFEVPMLWTIGFMVTFVIGGMTGVLLAVPPADFVLHNSLFLIAHF 430 KIFNWLFTMY+GRI F MLWTIGF+VTF +GGMTGVLLAVP ADFVLHNSLFLIAHF Sbjct: 361 VKIFNWLFTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHF 420 Query: 431 HNVIIGGVVFGMFAGINFWFPKAFGFKLNEFWGKCSFWFWLVGFYLAFMPLYVLGLMGVT 490 HNVIIGGVVFG FAG+ +W+PKAFGFKLNE WGK +FWFW++GF++AFMPLY LG MG+T Sbjct: 421 HNVIIGGVVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMT 480 Query: 491 RRMSHFDDPSLQIWFVVAAIGAGLIALGIGSFIIQIAVSIRDRKKLADVTGDPWNGRTLE 550 RR+S DP ++AA GA LIALGI +IQ+ VSIRDR + D+TGDPW GRTLE Sbjct: 481 RRLSQQIDPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLE 540 Query: 551 WSTSSPPPAYNFAFTPVVHDNDAWADMKK--NKYQRPLGDFVEIHMPKNTGAGFIIAALS 608 W+TSSPPP YNFA P VH+ DA+ +MK+ Y++P + EIHMPKN+GAG +IAA S Sbjct: 541 WATSSPPPFYNFAVVPHVHERDAFWEMKEKGEAYKKP-DHYEEIHMPKNSGAGIVIAAFS 599 Query: 609 AVLGFTLIWHMWLPAVATFVVLVAATIIHTFNYNRDYYIPADEVVRVEAER 659 + GF +IWH+W A+ F ++ I+ +F+ + DYY+P E+ ++E + Sbjct: 600 TIFGFAMIWHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 650 >ZcyoB [C] COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 EcZ Escherichia coli O157:H7 EDL933 Length = 663 Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/651 (67%), Positives = 538/651 (82%), Gaps = 3/651 (0%) Query: 11 IFGRLSLEAIPYHEPILIGTFAMVALGGIVVLGLLTKYRLWGMLWRDWFTSIDHKRIGIM 70 +FG+LSL+A+P+HEPI++ T A + LGG+ ++GL+T + W LW++W TS+DHKR+GIM Sbjct: 1 MFGKLSLDAVPFHEPIVMVTIAGIILGGLALVGLITYFGKWTYLWKEWLTSVDHKRLGIM 60 Query: 71 YIVLAIVMLLRGFADAVMMRAQQAIAFGDNAGFLPPHHYDQVFTAHGVIMIFFVAMPLVT 130 YI++AIVMLLRGFADA+MMR+QQA+A AGFLPPHHYDQ+FTAHGVIMIFFVAMP V Sbjct: 61 YIIVAIVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVI 120 Query: 131 GLMNYVVPLQIGARDVAFPFLNNFSFWMTTFGALLVMASLFVGEFARTGWLAYPPLSGIL 190 GLMN VVPLQIGARDVAFPFLNN SFW T G +LV SL VGEFA+TGWLAYPPLSGI Sbjct: 121 GLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIE 180 Query: 191 YSPDVGVDYYIWALQVAGVGTLLSGINLVVTIVKMRAPGMNMMKMPVFTWTSLCTNVLIV 250 YSP VGVDY+IW+LQ++G+GT L+GIN VTI+KMRAPGM M KMPVFTW SLC NVLI+ Sbjct: 181 YSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLII 240 Query: 251 AAFPVLTAVLAMLSLDRVFGTNFFTNDMGGNAMMYVNLIWIWGHPEVYILVLPAFGIFSE 310 A+FP+LT +A+L+LDR GT+FFTNDMGGN MMY+NLIW WGHPEVYIL+LP FG+FSE Sbjct: 241 ASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSE 300 Query: 311 IVSTFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTG 370 I +TFS KRLFGYTS+V+ATV IT+LS++VWLHHFFTMG+GA+VN+FFGITTMII+IPTG Sbjct: 301 IAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTG 360 Query: 371 AKIFNWLFTMYRGRIRFEVPMLWTIGFMVTFVIGGMTGVLLAVPPADFVLHNSLFLIAHF 430 KIFNWLFTMY+GRI F MLWTIGF+VTF +GGMTGVLLAVP ADFVLHNSLFLIAHF Sbjct: 361 VKIFNWLFTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHF 420 Query: 431 HNVIIGGVVFGMFAGINFWFPKAFGFKLNEFWGKCSFWFWLVGFYLAFMPLYVLGLMGVT 490 HNVIIGGVVFG FAG+ +W+PKAFGFKLNE WGK +FWFW++GF++AFMPLY LG MG+T Sbjct: 421 HNVIIGGVVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMT 480 Query: 491 RRMSHFDDPSLQIWFVVAAIGAGLIALGIGSFIIQIAVSIRDRKKLADVTGDPWNGRTLE 550 RR+S DP ++AA GA LIALGI +IQ+ VSIRDR + D+TGDPW GRTLE Sbjct: 481 RRLSQQIDPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLE 540 Query: 551 WSTSSPPPAYNFAFTPVVHDNDAWADMKK--NKYQRPLGDFVEIHMPKNTGAGFIIAALS 608 W+TSSPPP YNFA P VH+ DA+ +MK+ Y++P + EIHMPKN+GAG +IAA S Sbjct: 541 WATSSPPPFYNFAVVPHVHERDAFWEMKEKGEAYKKP-DHYEEIHMPKNSGAGIVIAAFS 599 Query: 609 AVLGFTLIWHMWLPAVATFVVLVAATIIHTFNYNRDYYIPADEVVRVEAER 659 + GF +IWH+W A+ F ++ I+ +F+ + DYY+P E+ ++E + Sbjct: 600 TIFGFAMIWHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 650 >ECs0485 [C] COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 Ecs Escherichia coli O157:H7 Length = 663 Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/651 (67%), Positives = 538/651 (82%), Gaps = 3/651 (0%) Query: 11 IFGRLSLEAIPYHEPILIGTFAMVALGGIVVLGLLTKYRLWGMLWRDWFTSIDHKRIGIM 70 +FG+LSL+A+P+HEPI++ T A + LGG+ ++GL+T + W LW++W TS+DHKR+GIM Sbjct: 1 MFGKLSLDAVPFHEPIVMVTIAGIILGGLALVGLITYFGKWTYLWKEWLTSVDHKRLGIM 60 Query: 71 YIVLAIVMLLRGFADAVMMRAQQAIAFGDNAGFLPPHHYDQVFTAHGVIMIFFVAMPLVT 130 YI++AIVMLLRGFADA+MMR+QQA+A AGFLPPHHYDQ+FTAHGVIMIFFVAMP V Sbjct: 61 YIIVAIVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVI 120 Query: 131 GLMNYVVPLQIGARDVAFPFLNNFSFWMTTFGALLVMASLFVGEFARTGWLAYPPLSGIL 190 GLMN VVPLQIGARDVAFPFLNN SFW T G +LV SL VGEFA+TGWLAYPPLSGI Sbjct: 121 GLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIE 180 Query: 191 YSPDVGVDYYIWALQVAGVGTLLSGINLVVTIVKMRAPGMNMMKMPVFTWTSLCTNVLIV 250 YSP VGVDY+IW+LQ++G+GT L+GIN VTI+KMRAPGM M KMPVFTW SLC NVLI+ Sbjct: 181 YSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLII 240 Query: 251 AAFPVLTAVLAMLSLDRVFGTNFFTNDMGGNAMMYVNLIWIWGHPEVYILVLPAFGIFSE 310 A+FP+LT +A+L+LDR GT+FFTNDMGGN MMY+NLIW WGHPEVYIL+LP FG+FSE Sbjct: 241 ASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSE 300 Query: 311 IVSTFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTG 370 I +TFS KRLFGYTS+V+ATV IT+LS++VWLHHFFTMG+GA+VN+FFGITTMII+IPTG Sbjct: 301 IAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTG 360 Query: 371 AKIFNWLFTMYRGRIRFEVPMLWTIGFMVTFVIGGMTGVLLAVPPADFVLHNSLFLIAHF 430 KIFNWLFTMY+GRI F MLWTIGF+VTF +GGMTGVLLAVP ADFVLHNSLFLIAHF Sbjct: 361 VKIFNWLFTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHF 420 Query: 431 HNVIIGGVVFGMFAGINFWFPKAFGFKLNEFWGKCSFWFWLVGFYLAFMPLYVLGLMGVT 490 HNVIIGGVVFG FAG+ +W+PKAFGFKLNE WGK +FWFW++GF++AFMPLY LG MG+T Sbjct: 421 HNVIIGGVVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMT 480 Query: 491 RRMSHFDDPSLQIWFVVAAIGAGLIALGIGSFIIQIAVSIRDRKKLADVTGDPWNGRTLE 550 RR+S DP ++AA GA LIALGI +IQ+ VSIRDR + D+TGDPW GRTLE Sbjct: 481 RRLSQQIDPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLE 540 Query: 551 WSTSSPPPAYNFAFTPVVHDNDAWADMKK--NKYQRPLGDFVEIHMPKNTGAGFIIAALS 608 W+TSSPPP YNFA P VH+ DA+ +MK+ Y++P + EIHMPKN+GAG +IAA S Sbjct: 541 WATSSPPPFYNFAVVPHVHERDAFWEMKEKGEAYKKP-DHYEEIHMPKNSGAGIVIAAFS 599 Query: 609 AVLGFTLIWHMWLPAVATFVVLVAATIIHTFNYNRDYYIPADEVVRVEAER 659 + GF +IWH+W A+ F ++ I+ +F+ + DYY+P E+ ++E + Sbjct: 600 TIFGFAMIWHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 650 >RSc2916 [C] COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 Rso Ralstonia solanacearum Length = 659 Score = 921 bits (2380), Expect = 0.0, Method: Compositional matrix adjust. Identities = 454/658 (68%), Positives = 533/658 (81%), Gaps = 2/658 (0%) Query: 11 IFGRLSLEAIPYHEPILIGTFAMVALGGIVVLGLLTKYRLWGMLWRDWFTSIDHKRIGIM 70 +FG+LSLEAIP HEPI++ T + + LGG + GL+T ++ W LW +W TS+DHK+IG+M Sbjct: 1 MFGKLSLEAIPLHEPIVVVTVSAILLGGAGLFGLITYFKKWSYLWNEWITSVDHKKIGVM 60 Query: 71 YIVLAIVMLLRGFADAVMMRAQQAIAFGDNAGFLPPHHYDQVFTAHGVIMIFFVAMPLVT 130 Y +LAIVMLLRGFADA+MMR+Q A+A G AG+LPP HYDQ+FTAHGVIMIFF+AMPL+T Sbjct: 61 YCILAIVMLLRGFADAIMMRSQLALASGGGAGYLPPEHYDQIFTAHGVIMIFFMAMPLMT 120 Query: 131 GLMNYVVPLQIGARDVAFPFLNNFSFWMTTFGALLVMASLFVGEFARTGWLAYPPLSGIL 190 GL+N +VPLQIGARDVAFPFLN SFW+ G +LV SL VG FARTGWLAYPPLS + Sbjct: 121 GLINLIVPLQIGARDVAFPFLNTLSFWLAAAGVVLVNLSLGVGNFARTGWLAYPPLSELA 180 Query: 191 YSPDVGVDYYIWALQVAGVGTLLSGINLVVTIVKMRAPGMNMMKMPVFTWTSLCTNVLIV 250 YSPDVGVDYYIWALQ++G+GTLL+G+N V TI KMRAPGM +M+MP+FTWT+LC N+LIV Sbjct: 181 YSPDVGVDYYIWALQISGLGTLLTGVNFVATIFKMRAPGMTLMRMPIFTWTALCANILIV 240 Query: 251 AAFPVLTAVLAMLSLDRVFGTNFFTNDMGGNAMMYVNLIWIWGHPEVYILVLPAFGIFSE 310 AAFPVLT LA+L LDR +FFTN GGNAM+YVNLIWIWGHPEVYILVLPAFG+FSE Sbjct: 241 AAFPVLTVALALLGLDRYLDMHFFTNTAGGNAMLYVNLIWIWGHPEVYILVLPAFGMFSE 300 Query: 311 IVSTFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTG 370 I+STFS K+LFGYTSMVYAT IT+LS+LVWLHHFFTMGSGA+VN+FFGI TMIISIPTG Sbjct: 301 IISTFSRKKLFGYTSMVYATAGITVLSFLVWLHHFFTMGSGANVNAFFGIATMIISIPTG 360 Query: 371 AKIFNWLFTMYRGRIRFEVPMLWTIGFMVTFVIGGMTGVLLAVPPADFVLHNSLFLIAHF 430 KIFNWLFTMYRGR+ F P+LWTIGFM+TFVIGGMTGVLLAVP ADF+LHNSLFLIAHF Sbjct: 361 VKIFNWLFTMYRGRVEFTSPVLWTIGFMITFVIGGMTGVLLAVPGADFLLHNSLFLIAHF 420 Query: 431 HNVIIGGVVFGMFAGINFWFPKAFGFKLNEFWGKCSFWFWLVGFYLAFMPLYVLGLMGVT 490 HN IIGGVVFG AGI FWFPKAFGFKL+E WGK +FW W VGFYLAFMPLYVLG MG+T Sbjct: 421 HNTIIGGVVFGYLAGITFWFPKAFGFKLDEKWGKRAFWCWFVGFYLAFMPLYVLGFMGMT 480 Query: 491 RRMSHFDDPSLQIWFVVAAIGAGLIALGIGSFIIQIAVSIRDRKKLADVTGDPWNGRTLE 550 RR++H D+P+ Q W +VA IGA +IA GI S +IQI VSIR+RK LADVTGDPW GRTLE Sbjct: 481 RRLNHTDNPAWQPWLIVAVIGAAVIACGIASQLIQIVVSIRNRKALADVTGDPWGGRTLE 540 Query: 551 WSTSSPPPAYNFAFTPVVHDNDAWADMKKNKY--QRPLGDFVEIHMPKNTGAGFIIAALS 608 W+TSSPP YNFA PVV D DA+ADMK + + +IHMPKNTGAGF I S Sbjct: 541 WATSSPPAHYNFATVPVVRDIDAFADMKARGEVPTQVAASYEKIHMPKNTGAGFFIGMFS 600 Query: 609 AVLGFTLIWHMWLPAVATFVVLVAATIIHTFNYNRDYYIPADEVVRVEAERTRLLNSH 666 V+GF L+WH+W AV ++ + I + N + DYY+PA EV E+ + + S Sbjct: 601 IVMGFALVWHIWWMAVLGLGGMIVSFIFRSNNDDIDYYVPAQEVHETESAYFQRIGSQ 658 >STM0442 [C] COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 Sty Salmonella typhimurium LT2 Length = 663 Score = 912 bits (2356), Expect = 0.0, Method: Compositional matrix adjust. Identities = 447/651 (68%), Positives = 539/651 (82%), Gaps = 3/651 (0%) Query: 11 IFGRLSLEAIPYHEPILIGTFAMVALGGIVVLGLLTKYRLWGMLWRDWFTSIDHKRIGIM 70 +FG+LSL+A+P+HEPI++ T A + +GG+ +L +T + W LW++W TS+DHKR+GIM Sbjct: 1 MFGKLSLDAVPFHEPIVMVTIAAIIVGGLAILAAITYFGKWTYLWKEWLTSVDHKRLGIM 60 Query: 71 YIVLAIVMLLRGFADAVMMRAQQAIAFGDNAGFLPPHHYDQVFTAHGVIMIFFVAMPLVT 130 YI++AIVMLLRGFADA+MMR+QQA+A AGFLPPHHYDQ+FTAHGVIMIFFVAMP V Sbjct: 61 YIIVAIVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVI 120 Query: 131 GLMNYVVPLQIGARDVAFPFLNNFSFWMTTFGALLVMASLFVGEFARTGWLAYPPLSGIL 190 GLMN VVPLQIGARDVAFPFLNN SFW T G +LV SL VGEFA+TGWLAYPPLSGI Sbjct: 121 GLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIE 180 Query: 191 YSPDVGVDYYIWALQVAGVGTLLSGINLVVTIVKMRAPGMNMMKMPVFTWTSLCTNVLIV 250 YSP VGVDY+IWALQ++G+GT L+GIN VTI+KMRAPGM M KMPVFTW SLC NVLI+ Sbjct: 181 YSPSVGVDYWIWALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLII 240 Query: 251 AAFPVLTAVLAMLSLDRVFGTNFFTNDMGGNAMMYVNLIWIWGHPEVYILVLPAFGIFSE 310 A+FP+LT +A+L+LDR GT+FFTNDMGGN MMY+NLIW WGHPEVYIL+LP FG+FSE Sbjct: 241 ASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSE 300 Query: 311 IVSTFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTG 370 I +TFS KRLFGYTS+V+ATV IT+LS++VWLHHFFTMG+GA+VN+FFGITTMII+IPTG Sbjct: 301 IAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTG 360 Query: 371 AKIFNWLFTMYRGRIRFEVPMLWTIGFMVTFVIGGMTGVLLAVPPADFVLHNSLFLIAHF 430 KIFNWLFTMY+GRI F M+WTIGF+VTF +GGMTGVLLAVP ADFVLHNSLFLIAHF Sbjct: 361 VKIFNWLFTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHF 420 Query: 431 HNVIIGGVVFGMFAGINFWFPKAFGFKLNEFWGKCSFWFWLVGFYLAFMPLYVLGLMGVT 490 HNVIIGGVVFG FAG+ +W+PKAFGFKLNE WGK +FWFW++GF++AFMPLYVLG MG+T Sbjct: 421 HNVIIGGVVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMT 480 Query: 491 RRMSHFDDPSLQIWFVVAAIGAGLIALGIGSFIIQIAVSIRDRKKLADVTGDPWNGRTLE 550 RR+S DP +VAA GA LIALGI +IQI VSIRDR + D+TGDPW GRTLE Sbjct: 481 RRLSQQIDPQFHTMLMVAAAGAALIALGILCQLIQIFVSIRDRDQNRDLTGDPWGGRTLE 540 Query: 551 WSTSSPPPAYNFAFTPVVHDNDAWADMKK--NKYQRPLGDFVEIHMPKNTGAGFIIAALS 608 WSTSSPPP YNFA P VH+ DA+ +MK+ YQ+P G + EIHMPKN+GAG +IAA + Sbjct: 541 WSTSSPPPFYNFAVVPHVHERDAFWEMKEKGEAYQQP-GQYEEIHMPKNSGAGIVIAAFA 599 Query: 609 AVLGFTLIWHMWLPAVATFVVLVAATIIHTFNYNRDYYIPADEVVRVEAER 659 V GF +IWH+W A+ F ++ + I+ +F+ + DYY+P EV ++E + Sbjct: 600 TVFGFAMIWHIWWLAIVGFAGMIISWIVKSFDEDVDYYVPVPEVEKLENQH 650