BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0041.p         (75 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA5539 [S] COG1469 Uncharacterized conserved protein Pae Pseudom...    86   2e-17
XF2096 [S] COG1469 Uncharacterized conserved protein Xfa Xylella...    83   1e-16

>PA5539 [S] COG1469 Uncharacterized conserved protein Pae Pseudomonas
           aeruginosa
          Length = 298

 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/70 (67%), Positives = 55/70 (78%), Gaps = 8/70 (11%)

Query: 1   LGTAVQTAVRRADEQAFALANGANLMYVEDAARRLRQAVE-----TRFGACAIRVSHVES 55
           LGTAVQTAV+RADEQAFALANG NLM+ EDA RRL +A++     +RF   +IRV H ES
Sbjct: 225 LGTAVQTAVKRADEQAFALANGQNLMFCEDAVRRLHRALQGYPQASRF---SIRVVHAES 281

Query: 56  LHAHDAVAAT 65
           LHAHDAVA +
Sbjct: 282 LHAHDAVAES 291


>XF2096 [S] COG1469 Uncharacterized conserved protein Xfa Xylella
           fastidiosa 9a5c
          Length = 299

 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/65 (63%), Positives = 47/65 (72%)

Query: 1   LGTAVQTAVRRADEQAFALANGANLMYVEDAARRLRQAVETRFGACAIRVSHVESLHAHD 60
           L T VQ AVRR DEQAFA  NGANLMYVEDA RRL+  +   + A  + V H+ESLH HD
Sbjct: 232 LSTPVQAAVRRVDEQAFARLNGANLMYVEDATRRLQHGLAIHYSAFRVHVRHLESLHPHD 291

Query: 61  AVAAT 65
           AVA+T
Sbjct: 292 AVAST 296