BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0036.p (386 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CC1350 Non COG 508 e-143 PA0746 [I] COG1960 Acyl-CoA dehydrogenases Pae Pseudomonas aerug... 502 e-142 BMEI0689 [I] COG1960 Acyl-CoA dehydrogenases Bme Brucella melite... 442 e-124 mlr1201 [I] COG1960 Acyl-CoA dehydrogenases Mlo Mesorhizobium loti 423 e-118 SMb20753 [I] COG1960 Acyl-CoA dehydrogenases Sme Sinorhizobium m... 413 e-115 Rv0752c [I] COG1960 Acyl-CoA dehydrogenases Mtu Mycobacterium tu... 375 e-103 MT0776 [I] COG1960 Acyl-CoA dehydrogenases MtC Mycobacterium tub... 375 e-103 BH3798 [I] COG1960 Acyl-CoA dehydrogenases Bha Bacillus halodurans 326 7e-89 BS_acdA [I] COG1960 Acyl-CoA dehydrogenases Bsu Bacillus subtilis 318 1e-86 AGl2714 [I] COG1960 Acyl-CoA dehydrogenases Atu Agrobacterium tu... 301 1e-81 >CC1350 Non COG Length = 379 Score = 508 bits (1307), Expect = e-143, Method: Compositional matrix adjust. Identities = 241/377 (63%), Positives = 293/377 (77%) Query: 1 MDFELNQDQLAFQQSARDFAAGEMAPFAAKWDEEAHFPLDVIAKAGELGFCGLYTPEADG 60 MDF LN+DQ+A Q +AR FA G++AP +A WDE HFP+DV+ +A ELGF G+Y E G Sbjct: 1 MDFALNEDQVAIQDAARAFAEGQLAPHSADWDENKHFPVDVLRQAAELGFAGIYVNEDVG 60 Query: 61 GLGLSRLDATVVFEELARACTSTAAYLTIHNMVSWMIASWGQPSLKAQWCEQLATGRKIG 120 G GLSRLDA+++FE L+ AAYLTIHNM SWMI +G L+ ++ +L T I Sbjct: 61 GSGLSRLDASIIFEALSYGDVPVAAYLTIHNMASWMIDRFGSDDLRQRYLPRLTTMELIA 120 Query: 121 SYCLTEPGSGSDAASLKTTARLEDGHYVLNGSKAFISGAGSTDVLVVMARTGGEGARGVS 180 SYCLTEPGSGSDAA+++TTA+L+ HYVLNG KAFISG G +D+ VVMARTGGEGA+GVS Sbjct: 121 SYCLTEPGSGSDAAAMRTTAKLDGDHYVLNGGKAFISGGGVSDIYVVMARTGGEGAKGVS 180 Query: 181 AIVVPGNAPGVSYGKKESKMGWNSQPTRTISFDNVKVPADHLLGQEGQGFIFAMKGLDGG 240 A VV G+S+G E KMGWN+QPT ++FDN +VP + +GQEG+GF FAM GLDGG Sbjct: 181 AFVVEKGMEGLSFGANERKMGWNAQPTAQVNFDNCRVPVANRIGQEGEGFRFAMMGLDGG 240 Query: 241 RINIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVRLA 300 R+NIA+CS+G AQ ALD A AY++ R QFGRP+ DFQALQFKLADM TEL AAR MVR A Sbjct: 241 RLNIASCSLGGAQFALDTAKAYLETRNQFGRPLKDFQALQFKLADMATELEAARLMVRRA 300 Query: 301 ATKLDAGSPEATTYCAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDVRVHQI 360 A LD+ PEAT CAMAKR ATD GF+V N+ALQLHGGYGY+++YPLER RD+RVHQI Sbjct: 301 AHALDSKHPEATKLCAMAKRFATDAGFQVANDALQLHGGYGYLQDYPLERLVRDLRVHQI 360 Query: 361 LEGTNEIMRVIISRKLL 377 LEGTNEIMRVII+R++ Sbjct: 361 LEGTNEIMRVIIAREMF 377 >PA0746 [I] COG1960 Acyl-CoA dehydrogenases Pae Pseudomonas aeruginosa Length = 387 Score = 502 bits (1293), Expect = e-142, Method: Compositional matrix adjust. Identities = 241/384 (62%), Positives = 302/384 (78%) Query: 1 MDFELNQDQLAFQQSARDFAAGEMAPFAAKWDEEAHFPLDVIAKAGELGFCGLYTPEADG 60 MDF+L ++Q +SAR FA E+AP AA WD + HFP++VI A E G+ GLY E DG Sbjct: 1 MDFDLTEEQRLLVESARAFARHELAPKAADWDRDHHFPVEVIRAAAEQGYLGLYIAEEDG 60 Query: 61 GLGLSRLDATVVFEELARACTSTAAYLTIHNMVSWMIASWGQPSLKAQWCEQLATGRKIG 120 GLGLSRL +++FE+LA C +T AY++IHNM +WM+AS+G +LK W L G + Sbjct: 61 GLGLSRLSTSLIFEQLAAGCVATTAYISIHNMAAWMLASFGDAALKEAWLPGLIGGESLA 120 Query: 121 SYCLTEPGSGSDAASLKTTARLEDGHYVLNGSKAFISGAGSTDVLVVMARTGGEGARGVS 180 SYCLTEP +GSDAA L+T AR E YVL+GSK FISGAGST VL+VMARTG +GARG+S Sbjct: 121 SYCLTEPDAGSDAARLRTRARREGDEYVLDGSKCFISGAGSTQVLIVMARTGEDGARGIS 180 Query: 181 AIVVPGNAPGVSYGKKESKMGWNSQPTRTISFDNVKVPADHLLGQEGQGFIFAMKGLDGG 240 +VP +APG+ YG+ E KMGW +QPTRTI+F+ V++PA + +G EGQGF++AMKGLDGG Sbjct: 181 CFLVPADAPGIRYGRNEDKMGWRAQPTRTITFEGVRIPAGNRIGPEGQGFVYAMKGLDGG 240 Query: 241 RINIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVRLA 300 R+NIA+CS+GAAQAAL+ + Y++ER+QFG+P+A FQALQFKLADM TEL A+RQMVRL Sbjct: 241 RLNIASCSLGAAQAALEQSMRYVEEREQFGKPLATFQALQFKLADMLTELTASRQMVRLG 300 Query: 301 ATKLDAGSPEATTYCAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDVRVHQI 360 A +LD G EAT YCAMAKR ATD F VCNEALQLHGGYGY+ +YPLER+ RD RVHQI Sbjct: 301 AHRLDRGDAEATLYCAMAKRFATDRCFDVCNEALQLHGGYGYLNDYPLERWVRDTRVHQI 360 Query: 361 LEGTNEIMRVIISRKLLDRDNLDD 384 LEGTNEIMRVI++R+LL++ + D Sbjct: 361 LEGTNEIMRVIVARRLLEQGGMLD 384 >BMEI0689 [I] COG1960 Acyl-CoA dehydrogenases Bme Brucella melitensis Length = 385 Score = 442 bits (1138), Expect = e-124, Method: Compositional matrix adjust. Identities = 212/377 (56%), Positives = 276/377 (73%) Query: 3 FELNQDQLAFQQSARDFAAGEMAPFAAKWDEEAHFPLDVIAKAGELGFCGLYTPEADGGL 62 FELN+DQ A Q+ A+ FAA +AP A +WD + HFP+D++ + G LG G+Y + GG Sbjct: 9 FELNEDQCAIQEMAQAFAADRIAPQALQWDRDKHFPVDILRETGPLGMGGIYVRDDVGGS 68 Query: 63 GLSRLDATVVFEELARACTSTAAYLTIHNMVSWMIASWGQPSLKAQWCEQLATGRKIGSY 122 GL RLDA ++FE LA AC + +A+L+IHNM +WMI ++G + ++ QL + + SY Sbjct: 69 GLKRLDAVLIFEALATACPTFSAFLSIHNMAAWMIDTFGNEEQRQRFLPQLTSMEWLASY 128 Query: 123 CLTEPGSGSDAASLKTTARLEDGHYVLNGSKAFISGAGSTDVLVVMARTGGEGARGVSAI 182 CLTEPGSGSDAA+LKT A + HY++NG+K FISGAGSTD+ V M RTG +G +G+S + Sbjct: 129 CLTEPGSGSDAAALKTRAVRDGDHYIVNGAKQFISGAGSTDLYVTMVRTGEDGPKGISTL 188 Query: 183 VVPGNAPGVSYGKKESKMGWNSQPTRTISFDNVKVPADHLLGQEGQGFIFAMKGLDGGRI 242 VVP +APG+S+G E KMGWN+QPTRT+ FDN +VP ++ LG EG GF AM GLDGGR+ Sbjct: 189 VVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGVGFKIAMPGLDGGRL 248 Query: 243 NIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVRLAAT 302 NIA CS+G AQAA A Y ERK FG+ I FQALQF+LADM+TEL A+R ++ AA+ Sbjct: 249 NIAACSLGGAQAATAKALEYCAERKAFGQTIDRFQALQFRLADMETELAASRMLLYTAAS 308 Query: 303 KLDAGSPEATTYCAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDVRVHQILE 362 KLD + +A + AMAKR TD F V NEALQL GGYGY+ +Y +E+ RD+RVHQILE Sbjct: 309 KLDRKTHDAGKWSAMAKRFVTDTSFNVANEALQLLGGYGYLHDYGIEKLVRDLRVHQILE 368 Query: 363 GTNEIMRVIISRKLLDR 379 GTNEIMRVII+R ++ R Sbjct: 369 GTNEIMRVIIARHMIGR 385 >mlr1201 [I] COG1960 Acyl-CoA dehydrogenases Mlo Mesorhizobium loti Length = 388 Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust. Identities = 210/377 (55%), Positives = 267/377 (70%) Query: 3 FELNQDQLAFQQSARDFAAGEMAPFAAKWDEEAHFPLDVIAKAGELGFCGLYTPEADGGL 62 FELN++Q A Q+ A+ FAA +AP A WD HFP DVI + G LG G+Y + GG Sbjct: 12 FELNEEQRAIQEMAQAFAADRVAPNALDWDRRKHFPADVIRETGPLGLGGIYVRDDVGGS 71 Query: 63 GLSRLDATVVFEELARACTSTAAYLTIHNMVSWMIASWGQPSLKAQWCEQLATGRKIGSY 122 L RLDA ++FE L+ A +++++IHNMV+ MI +G + ++ +L + + SY Sbjct: 72 ALGRLDAVLIFEALSHADPGFSSFISIHNMVASMIDRFGNDEQRQRFLPKLTSMEWLASY 131 Query: 123 CLTEPGSGSDAASLKTTARLEDGHYVLNGSKAFISGAGSTDVLVVMARTGGEGARGVSAI 182 CLTEPGSGSDAA+LKT A G YVLNG+K FISGAG +DV VM RTG +G +G+S I Sbjct: 132 CLTEPGSGSDAAALKTRAVKSGGDYVLNGAKQFISGAGDSDVYAVMVRTGADGPKGISTI 191 Query: 183 VVPGNAPGVSYGKKESKMGWNSQPTRTISFDNVKVPADHLLGQEGQGFIFAMKGLDGGRI 242 VVP +APG+S+G E KMGW+ Q TR + F++ KVPA++LL EG GF AM GLDGGR+ Sbjct: 192 VVPKDAPGLSFGANEHKMGWHMQSTRQVIFEDCKVPAENLLSGEGAGFGIAMAGLDGGRL 251 Query: 243 NIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVRLAAT 302 NIA CS+G AQ+ALD A +Y ERK FG I FQALQF+LADM+TEL AAR + AA+ Sbjct: 252 NIAACSLGGAQSALDKALSYTAERKAFGSKINQFQALQFRLADMETELQAARIFLYAAAS 311 Query: 303 KLDAGSPEATTYCAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDVRVHQILE 362 KLD +P+A + AMAKR TD GF V N ALQL GGYGY+ +Y +E+ RD+RVHQILE Sbjct: 312 KLDRKAPDAGKWSAMAKRFVTDTGFNVANNALQLLGGYGYLHDYGIEKLVRDLRVHQILE 371 Query: 363 GTNEIMRVIISRKLLDR 379 GTNEIMRVII+R L+ R Sbjct: 372 GTNEIMRVIIARALIGR 388 >SMb20753 [I] COG1960 Acyl-CoA dehydrogenases Sme Sinorhizobium meliloti Length = 380 Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust. Identities = 201/379 (53%), Positives = 266/379 (70%) Query: 1 MDFELNQDQLAFQQSARDFAAGEMAPFAAKWDEEAHFPLDVIAKAGELGFCGLYTPEADG 60 MDF L+++Q A + A DFA E+AP A WD++ HFP++ + A LG G+Y + G Sbjct: 1 MDFRLSEEQEAIRTMALDFARDEIAPHAVDWDQQKHFPVETLRAAAALGMAGIYIRDDVG 60 Query: 61 GLGLSRLDATVVFEELARACTSTAAYLTIHNMVSWMIASWGQPSLKAQWCEQLATGRKIG 120 G GL+RLDA ++ E LA C + A++++IHNM + MI +G + + L T + Sbjct: 61 GTGLTRLDAAMIIEALATGCPAIASFVSIHNMCAGMIDRYGTDEQRRRLLPPLLTMDVLA 120 Query: 121 SYCLTEPGSGSDAASLKTTARLEDGHYVLNGSKAFISGAGSTDVLVVMARTGGEGARGVS 180 SYCLTEPGSGSDAA+LKT A E Y+L G K FISGAG + + +VMARTG EG +G+S Sbjct: 121 SYCLTEPGSGSDAAALKTRAVREGDAYLLTGQKQFISGAGESGLYIVMARTGEEGPKGIS 180 Query: 181 AIVVPGNAPGVSYGKKESKMGWNSQPTRTISFDNVKVPADHLLGQEGQGFIFAMKGLDGG 240 A VV +APG+++G E KMGW++QPTR + DNV+V ++ LG EG+GF AM GLDGG Sbjct: 181 AFVVEKDAPGLTFGANEKKMGWHAQPTRAVMLDNVRVSVENRLGAEGEGFRIAMAGLDGG 240 Query: 241 RINIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVRLA 300 R++IA S+G AQ+A D A AY++ER+ FG+ I +FQALQF+LADM T+L AR + A Sbjct: 241 RLSIAAASLGGAQSAFDKALAYVQERRAFGKAIGEFQALQFRLADMATDLEIARTFLWRA 300 Query: 301 ATKLDAGSPEATTYCAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDVRVHQI 360 A LDA PEAT CAMAKR TD F V N+ALQLHGGYGY+ +Y +E+ RD+RVHQI Sbjct: 301 ACALDAADPEATKLCAMAKRFVTDRCFSVANDALQLHGGYGYLADYGVEKIVRDLRVHQI 360 Query: 361 LEGTNEIMRVIISRKLLDR 379 LEGTNEIMR+I+SR ++ R Sbjct: 361 LEGTNEIMRLIVSRAIMGR 379 >Rv0752c [I] COG1960 Acyl-CoA dehydrogenases Mtu Mycobacterium tuberculosis H37Rv Length = 390 Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust. Identities = 197/379 (51%), Positives = 254/379 (67%), Gaps = 7/379 (1%) Query: 3 FELNQDQLAFQQSARDFAAGEMAPFAAKWDEEAHFPLDVIAKAGELGFCGLYTPEADGGL 62 F LN D+ ++A FA +AP A +WD HFP+DV+ +A ELG +Y + GG Sbjct: 2 FVLNDDERVIVETAAAFAGKRLAPHALEWDAAKHFPVDVLREAAELGMAAIYCRDDVGGS 61 Query: 63 GLSRLDATVVFEELARACTSTAAYLTIHNMVSWMIASWGQPSLKAQWCEQLATGRKIGSY 122 GL RLD +FE+LA A TAA+L+IHNM +WMI S+G + W +LAT I SY Sbjct: 62 GLRRLDGVRIFEQLAIADPVTAAFLSIHNMCAWMIDSFGTDEQRKDWIPRLATMGVIASY 121 Query: 123 CLTEPGSGSDAASLKTTARL----EDGHYVLNGSKAFISGAGSTDVLVVMARTGGEGARG 178 CLTEPG+GSDA +L T A + G YVL+G K FISGA ++DV VVMARTG EG RG Sbjct: 122 CLTEPGAGSDAGALSTRAVRHGSGKGGDYVLDGVKQFISGAAASDVYVVMARTGAEGPRG 181 Query: 179 VSAIVVPGNAPGVSYGKKESKMGWNSQPTRTISFDNVKVPADHLLGQ---EGQGFIFAMK 235 VSA +V PG+S+G E+KMGW++QPT + D V+VPA+ +LG EG GF AM Sbjct: 182 VSAFIVEKGTPGLSFGAPEAKMGWHAQPTAQVVLDGVRVPAEAMLGGADGEGAGFGIAMS 241 Query: 236 GLDGGRINIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQ 295 GL+GGR+NIA CS+G AQAA D A AY+++R+ FG + D ++F LADM T L +R Sbjct: 242 GLNGGRLNIAACSLGGAQAAFDKAGAYVRDRQAFGGSLLDEPTVRFTLADMATGLQTSRM 301 Query: 296 MVRLAATKLDAGSPEATTYCAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDV 355 ++ AA+ LD + CAMAKR TD F V ++ALQLHGGYGY+REY LE+ RD+ Sbjct: 302 LLWRAASALDDDDADKVELCAMAKRYVTDTCFEVADQALQLHGGYGYLREYGLEKIVRDL 361 Query: 356 RVHQILEGTNEIMRVIISR 374 RVH+ILEGTNEIMR++I R Sbjct: 362 RVHRILEGTNEIMRLVIGR 380 >MT0776 [I] COG1960 Acyl-CoA dehydrogenases MtC Mycobacterium tuberculosis CDC1551 Length = 390 Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust. Identities = 197/379 (51%), Positives = 254/379 (67%), Gaps = 7/379 (1%) Query: 3 FELNQDQLAFQQSARDFAAGEMAPFAAKWDEEAHFPLDVIAKAGELGFCGLYTPEADGGL 62 F LN D+ ++A FA +AP A +WD HFP+DV+ +A ELG +Y + GG Sbjct: 2 FVLNDDERVIVETAAAFAGKRLAPHALEWDAAKHFPVDVLREAAELGMAAIYCRDDVGGS 61 Query: 63 GLSRLDATVVFEELARACTSTAAYLTIHNMVSWMIASWGQPSLKAQWCEQLATGRKIGSY 122 GL RLD +FE+LA A TAA+L+IHNM +WMI S+G + W +LAT I SY Sbjct: 62 GLRRLDGVRIFEQLAIADPVTAAFLSIHNMCAWMIDSFGTDEQRKDWIPRLATMGVIASY 121 Query: 123 CLTEPGSGSDAASLKTTARL----EDGHYVLNGSKAFISGAGSTDVLVVMARTGGEGARG 178 CLTEPG+GSDA +L T A + G YVL+G K FISGA ++DV VVMARTG EG RG Sbjct: 122 CLTEPGAGSDAGALSTRAVRHGSGKGGDYVLDGVKQFISGAAASDVYVVMARTGAEGPRG 181 Query: 179 VSAIVVPGNAPGVSYGKKESKMGWNSQPTRTISFDNVKVPADHLLGQ---EGQGFIFAMK 235 VSA +V PG+S+G E+KMGW++QPT + D V+VPA+ +LG EG GF AM Sbjct: 182 VSAFIVEKGTPGLSFGAPEAKMGWHAQPTAQVVLDGVRVPAEAMLGGADGEGAGFGIAMS 241 Query: 236 GLDGGRINIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQ 295 GL+GGR+NIA CS+G AQAA D A AY+++R+ FG + D ++F LADM T L +R Sbjct: 242 GLNGGRLNIAACSLGGAQAAFDKAGAYVRDRQAFGGSLLDEPTVRFTLADMATGLQTSRM 301 Query: 296 MVRLAATKLDAGSPEATTYCAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDV 355 ++ AA+ LD + CAMAKR TD F V ++ALQLHGGYGY+REY LE+ RD+ Sbjct: 302 LLWRAASALDDDDADKVELCAMAKRYVTDTCFEVADQALQLHGGYGYLREYGLEKIVRDL 361 Query: 356 RVHQILEGTNEIMRVIISR 374 RVH+ILEGTNEIMR++I R Sbjct: 362 RVHRILEGTNEIMRLVIGR 380 >BH3798 [I] COG1960 Acyl-CoA dehydrogenases Bha Bacillus halodurans Length = 380 Score = 326 bits (835), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 181/382 (47%), Positives = 239/382 (62%), Gaps = 9/382 (2%) Query: 1 MDFELNQDQLAFQQSARDFAAGEMAPFAAKWDEEAHFPLDVIAKAGELGFCGLYTPEADG 60 M+F L +Q ++ RDFA E+AP A + DEE F ++ + ELG G+ PE G Sbjct: 1 MNFLLTDEQQMIKKMVRDFAENEVAPTAEERDEEERFDREIFDQMAELGLTGIPWPEEYG 60 Query: 61 GLGLSRLDATVVFEELARACTSTAAYLTIH-NMVSWMIASWGQPSLKAQWCEQLATGRKI 119 G+G + + EEL+R C ST L+ H ++ SW + +G K Q+ +A G+KI Sbjct: 61 GIGADYVSYVIAVEELSRVCASTGVTLSAHLSLASWPVYKFGTEEQKQQFLRPMAEGKKI 120 Query: 120 GSYCLTEPGSGSDAASLKTTARLEDGHYVLNGSKAFISGAGSTDVLVVMARTGGEG-ARG 178 G+Y LTEPGSGSDAA++KTTA LE Y+LNGSK FI+ G D+ +V A T E +G Sbjct: 121 GAYGLTEPGSGSDAANMKTTAVLEGDDYILNGSKIFITNGGIADIYIVFAVTEPEKRHKG 180 Query: 179 VSAIVVPGNAPGVSYGKKESKMGWNSQPTRTISFDNVKVPADHLLGQEGQGFIFAMKGLD 238 VSA +V + PG S GKKE K+G S PT I F++ +VP ++LLG+EG GF AM LD Sbjct: 181 VSAFIVEADTPGFSVGKKEKKLGIRSSPTTEIIFEDCRVPKENLLGKEGDGFKIAMMTLD 240 Query: 239 GGRINIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVR 298 GGR IA +VG AQ ALDAA AY ERKQFG+PI Q + FKLADM T++ A+R + Sbjct: 241 GGRNGIAAQAVGIAQGALDAAVAYANERKQFGKPIGQQQGIAFKLADMATKVEASRLLTY 300 Query: 299 LAATKLDAGSPEATTY---CAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDV 355 AA + E +Y AM+K A D V EA+Q+ GGYGY +EYP+ERY RD Sbjct: 301 QAAWR----ESEGLSYGKESAMSKLFAGDTAMDVTVEAVQVFGGYGYTKEYPVERYMRDA 356 Query: 356 RVHQILEGTNEIMRVIISRKLL 377 ++ QI EGTNEI R++IS+ LL Sbjct: 357 KITQIYEGTNEIQRLVISKMLL 378 >BS_acdA [I] COG1960 Acyl-CoA dehydrogenases Bsu Bacillus subtilis Length = 379 Score = 318 bits (816), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 174/380 (45%), Positives = 234/380 (61%), Gaps = 3/380 (0%) Query: 1 MDFELNQDQLAFQQSARDFAAGEMAPFAAKWDEEAHFPLDVIAKAGELGFCGLYTPEADG 60 M+F L+++ ++ RDFA E+AP AA+ DE+ F ++ + LG G+ PE G Sbjct: 1 MNFSLSEEHEMIRKLVRDFAKHEVAPTAAERDEQERFDRELFREMANLGLTGIPWPEDYG 60 Query: 61 GLGLSRLDATVVFEELARACTSTAAYLTIH-NMVSWMIASWGQPSLKAQWCEQLATGRKI 119 G+G L + EEL++ C ST L+ H ++ SW + ++G K ++ QLA G KI Sbjct: 61 GIGSDYLAYVIAVEELSKVCASTGVTLSAHISLCSWPLFAFGTEEQKTEYLTQLALGEKI 120 Query: 120 GSYCLTEPGSGSDAASLKTTARLEDGHYVLNGSKAFISGAGSTDVLVVMARTGGEGAR-G 178 G++ LTE GSGSDA S+KTTA YVLNGSK FI+ G D+ +V A T E + G Sbjct: 121 GAFALTEAGSGSDAGSMKTTAERIGDDYVLNGSKVFITNGGVADIYIVFAVTDPEKKKKG 180 Query: 179 VSAIVVPGNAPGVSYGKKESKMGWNSQPTRTISFDNVKVPADHLLGQEGQGFIFAMKGLD 238 V+A +V + G GKKE K+G S PT I F++ VPA LG+EG+GF AMK LD Sbjct: 181 VTAFIVEKDFEGFFTGKKEKKLGIRSSPTTEIMFEDCVVPASKRLGEEGEGFKIAMKTLD 240 Query: 239 GGRINIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVR 298 GGR IA +VG AQ ALDAA Y KERKQFG+ IA+ Q + FKLADM T + A+R + Sbjct: 241 GGRNGIAAQAVGIAQGALDAALQYAKERKQFGKSIAEQQGIAFKLADMATMIEASRLLTY 300 Query: 299 LAATKLDAGSPEATTYCAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDVRVH 358 AA +G P AM+K +A D +V EA+Q+ GGYGY ++YP+ERY RD ++ Sbjct: 301 QAAWLESSGLPYGKA-SAMSKLMAGDTAMKVTTEAVQIFGGYGYTKDYPVERYMRDAKIT 359 Query: 359 QILEGTNEIMRVIISRKLLD 378 QI EGT EI R++ISR L D Sbjct: 360 QIYEGTQEIQRLVISRMLAD 379 >AGl2714 [I] COG1960 Acyl-CoA dehydrogenases Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 380 Score = 301 bits (772), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 160/374 (42%), Positives = 236/374 (63%), Gaps = 3/374 (0%) Query: 5 LNQDQLAFQQSARDFAAGEMAPFAAKWDEEAHFPLDVIAKAGELGFCGLYTPEADGGLGL 64 LN+ Q + ARDFA ++P AA D E+ FP D + + GELGF G+ E GG Sbjct: 8 LNEAQQQIRDMARDFARERLSPGAAARDRESRFPKDELKEMGELGFLGMLVSEDYGGSET 67 Query: 65 SRLDATVVFEELARACTSTAAYLTIHNMVSWM-IASWGQPSLKAQWCEQLATGRKIGSYC 123 + + EE+A + + +++HN V + I +G K ++ +LA G IG + Sbjct: 68 GAVAYALALEEIAAGDGACSTIMSVHNSVGCVPILKFGTEEQKQRFLPKLAAGEWIGGFA 127 Query: 124 LTEPGSGSDAASLKTTARLEDGHYVLNGSKAFISGAGSTDVLVVMART-GGEGARGVSAI 182 LTEP +GSDA++LKT AR + YVL+G+K FI+ + DV++V A T G +G++A Sbjct: 128 LTEPQAGSDASNLKTRARRDGDRYVLDGAKQFITSGKNGDVIIVFAVTDAAAGKKGITAF 187 Query: 183 VVPGNAPGVSYGKKESKMGWNSQPTRTISFDNVKVPADHLLGQEGQGFIFAMKGLDGGRI 242 +VP + PG + E K+G +S T I+F + VP D LG+EGQG+ A+ L+GGRI Sbjct: 188 IVPTDTPGYEVIRVEEKLGLHSSDTCQIAFTEMAVPVDLRLGEEGQGYRIALANLEGGRI 247 Query: 243 NIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVRLAAT 302 IA +VG AQAA +AA Y +ERK FG+ I + QA+ F+LADM T + AARQ+V AA Sbjct: 248 GIAAQAVGMAQAAFEAARDYARERKAFGQAIIEHQAVAFRLADMATRITAARQLVLHAAA 307 Query: 303 KLDAGSPEATTYCAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDVRVHQILE 362 +AG P + +MAK A+++ RVC++A+Q+HGGYGY+ +YP+ER +RDVR+ QI E Sbjct: 308 LKEAGEP-CLSEASMAKLFASEMAERVCSDAIQIHGGYGYMADYPVERIYRDVRICQIYE 366 Query: 363 GTNEIMRVIISRKL 376 GT+++ R++I+R L Sbjct: 367 GTSDVQRMVIARNL 380