BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0001.p (255 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp1363 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 317 2e-86 RSc3412 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 309 4e-84 ECs2596 [NT] COG0840 Methyl-accepting chemotaxis protein Ecs Esc... 299 4e-81 Ztar [NT] COG0840 Methyl-accepting chemotaxis protein EcZ Escher... 297 1e-80 tar [NT] COG0840 Methyl-accepting chemotaxis protein Eco Escheri... 297 2e-80 PA0176 [NT] COG0840 Methyl-accepting chemotaxis protein Pae Pseu... 297 2e-80 YPO1675 [NT] COG0840 Methyl-accepting chemotaxis protein Ype Yer... 296 4e-80 STM1919 [NT] COG0840 Methyl-accepting chemotaxis protein Sty Sal... 295 6e-80 RSc0606 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 293 2e-79 RSp1209 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 290 2e-78 >RSp1363 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 543 Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 171/255 (67%), Positives = 208/255 (81%) Query: 1 LASIVTRVRSGTHNIETAATEIAAGNLDLSSRTEEQAGALEETASAMEELTSTVKHNAEN 60 L IV++VR GT I A++E+A+GN+DLSSRTE+QA +LEETA+AME+LTSTVK NA+N Sbjct: 259 LHGIVSQVRGGTDTITRASSEVASGNIDLSSRTEQQASSLEETAAAMEQLTSTVKQNADN 318 Query: 61 ARQASEMAVSASTVAGEGGTVVKQVIDTMEQINDSSKKIVDIISVIDGIAFQTNILALNA 120 A++AS +A +AS VA +GG V + I TM IN SS+KIVDII VIDGIAFQTNILALNA Sbjct: 319 AQEASRLASNASMVATKGGDAVDEAIQTMSTINTSSRKIVDIIGVIDGIAFQTNILALNA 378 Query: 121 AVEAARAGEQGRGFAVVATEVRSLAQRSAAAAKEIKILISDSVEKVETGSQLVAQAGQTI 180 AVEAARAGEQGRGFAVVA EVRSLAQRSAAAAKEIK LI DSV V TG+ V +AGQ I Sbjct: 379 AVEAARAGEQGRGFAVVAGEVRSLAQRSAAAAKEIKALIEDSVGHVSTGTAKVEEAGQII 438 Query: 181 GNVVESVRRVSAIVSEISTASREQSDGISQVNLAITQMDNVTQQNAALVEEAAAAAKSLQ 240 +VV ++ V+ IVSEIS +SREQSDGI Q+N AITQMD TQ+NA+LVEE+A AA++LQ Sbjct: 439 RDVVAGIQNVTNIVSEISASSREQSDGIEQINEAITQMDKATQENASLVEESATAAQALQ 498 Query: 241 GESVELTTIVSTFKI 255 ++ +L +VSTFK+ Sbjct: 499 DQANQLADMVSTFKL 513 >RSc3412 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 515 Score = 309 bits (791), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 167/255 (65%), Positives = 206/255 (80%) Query: 1 LASIVTRVRSGTHNIETAATEIAAGNLDLSSRTEEQAGALEETASAMEELTSTVKHNAEN 60 L+ IV VR+ ++ TA+ +IA GN DLS RTE+QA AL+ET++ M+EL STV +NAEN Sbjct: 259 LSGIVATVRNNAESVATASAQIAQGNQDLSHRTEQQASALQETSATMDELGSTVGNNAEN 318 Query: 61 ARQASEMAVSASTVAGEGGTVVKQVIDTMEQINDSSKKIVDIISVIDGIAFQTNILALNA 120 ARQA+++A AS+VA EGG VV QV+ M+ IND SKKI DII VIDGIAFQTNILALNA Sbjct: 319 ARQANQLASGASSVAAEGGEVVSQVVGMMKGINDGSKKIADIIGVIDGIAFQTNILALNA 378 Query: 121 AVEAARAGEQGRGFAVVATEVRSLAQRSAAAAKEIKILISDSVEKVETGSQLVAQAGQTI 180 AVEAARAGEQGRGFAVVA EVRSLAQRSAAAAKEIK LI+ SVE+VE G+ LV +AG T+ Sbjct: 379 AVEAARAGEQGRGFAVVAAEVRSLAQRSAAAAKEIKALITSSVEQVEQGTTLVDRAGATM 438 Query: 181 GNVVESVRRVSAIVSEISTASREQSDGISQVNLAITQMDNVTQQNAALVEEAAAAAKSLQ 240 +V +++RVS IV+EIS+AS EQS G+SQV A++QMD TQQNAALVE++AAAA SLQ Sbjct: 439 EQIVGAIQRVSNIVAEISSASAEQSSGVSQVGQAVSQMDEATQQNAALVEQSAAAASSLQ 498 Query: 241 GESVELTTIVSTFKI 255 G++ +L V+ FK+ Sbjct: 499 GQAQQLVQAVAVFKL 513 >ECs2596 [NT] COG0840 Methyl-accepting chemotaxis protein Ecs Escherichia coli O157:H7 Length = 553 Score = 299 bits (765), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 168/255 (65%), Positives = 204/255 (80%) Query: 1 LASIVTRVRSGTHNIETAATEIAAGNLDLSSRTEEQAGALEETASAMEELTSTVKHNAEN 60 L VT VR G+ I EIAAGN DLSSRTE+QA ALEETA++ME+LT+TVK NA+N Sbjct: 261 LTDTVTHVREGSDAIYAGTREIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADN 320 Query: 61 ARQASEMAVSASTVAGEGGTVVKQVIDTMEQINDSSKKIVDIISVIDGIAFQTNILALNA 120 ARQAS++A SAS A GG VV V+ TM +I DSSKKI DIISVIDGIAFQTNILALNA Sbjct: 321 ARQASQLAQSASDTAQHGGKVVDGVVKTMHEIADSSKKIADIISVIDGIAFQTNILALNA 380 Query: 121 AVEAARAGEQGRGFAVVATEVRSLAQRSAAAAKEIKILISDSVEKVETGSQLVAQAGQTI 180 AVEAARAGEQGRGFAVVA EVR+LA RSA AAKEIK LI DSV +V+TGS LV AG+T+ Sbjct: 381 AVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIKALIEDSVSRVDTGSVLVESAGETM 440 Query: 181 GNVVESVRRVSAIVSEISTASREQSDGISQVNLAITQMDNVTQQNAALVEEAAAAAKSLQ 240 N+V++V RV+ I+ EI++AS EQS GI QV LA+++MD+VTQQNA+LV+E+AAAA +L+ Sbjct: 441 NNIVDAVTRVTDIMGEIASASDEQSRGIDQVALAVSEMDHVTQQNASLVQESAAAAAALE 500 Query: 241 GESVELTTIVSTFKI 255 ++ LT VS F++ Sbjct: 501 EQASRLTQAVSAFRL 515 >Ztar [NT] COG0840 Methyl-accepting chemotaxis protein EcZ Escherichia coli O157:H7 EDL933 Length = 553 Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 168/255 (65%), Positives = 203/255 (79%) Query: 1 LASIVTRVRSGTHNIETAATEIAAGNLDLSSRTEEQAGALEETASAMEELTSTVKHNAEN 60 L VT VR G+ I EIAAGN DLSSRTE+QA ALEETA++ME+LT+TVK NA+N Sbjct: 261 LTDTVTHVREGSDAIYAGTREIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADN 320 Query: 61 ARQASEMAVSASTVAGEGGTVVKQVIDTMEQINDSSKKIVDIISVIDGIAFQTNILALNA 120 ARQAS++A SAS A GG VV V TM +I DSSKKI DIISVIDGIAFQTNILALNA Sbjct: 321 ARQASQLAQSASDTAQHGGKVVDGVXKTMHEIADSSKKIADIISVIDGIAFQTNILALNA 380 Query: 121 AVEAARAGEQGRGFAVVATEVRSLAQRSAAAAKEIKILISDSVEKVETGSQLVAQAGQTI 180 AVEAARAGEQGRGFAVVA EVR+LA RSA AAKEIK LI DSV +V+TGS LV AG+T+ Sbjct: 381 AVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIKALIEDSVSRVDTGSVLVESAGETM 440 Query: 181 GNVVESVRRVSAIVSEISTASREQSDGISQVNLAITQMDNVTQQNAALVEEAAAAAKSLQ 240 N+V++V RV+ I+ EI++AS EQS GI QV LA+++MD+VTQQNA+LV+E+AAAA +L+ Sbjct: 441 NNIVDAVTRVTDIMGEIASASDEQSRGIDQVALAVSEMDHVTQQNASLVQESAAAAAALE 500 Query: 241 GESVELTTIVSTFKI 255 ++ LT VS F++ Sbjct: 501 EQASRLTQAVSAFRL 515 >tar [NT] COG0840 Methyl-accepting chemotaxis protein Eco Escherichia coli K12 Length = 553 Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 168/255 (65%), Positives = 202/255 (79%) Query: 1 LASIVTRVRSGTHNIETAATEIAAGNLDLSSRTEEQAGALEETASAMEELTSTVKHNAEN 60 L VT VR G+ I EIAAGN DLSSRTE+QA ALEETA++ME+LT+TVK NA+N Sbjct: 261 LTDTVTHVREGSDAIYAGTREIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADN 320 Query: 61 ARQASEMAVSASTVAGEGGTVVKQVIDTMEQINDSSKKIVDIISVIDGIAFQTNILALNA 120 ARQAS++A SAS A GG VV V+ TM +I DSSKKI DIISVIDGIAFQTNILALNA Sbjct: 321 ARQASQLAQSASDTAQHGGKVVDGVVKTMHEIADSSKKIADIISVIDGIAFQTNILALNA 380 Query: 121 AVEAARAGEQGRGFAVVATEVRSLAQRSAAAAKEIKILISDSVEKVETGSQLVAQAGQTI 180 AVEAARAGEQGRGFAVVA EVR+LA RSA AAKEIK LI DSV +V+TGS LV AG+T+ Sbjct: 381 AVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIKALIEDSVSRVDTGSVLVESAGETM 440 Query: 181 GNVVESVRRVSAIVSEISTASREQSDGISQVNLAITQMDNVTQQNAALVEEAAAAAKSLQ 240 N+V +V RV+ I+ EI++AS EQS GI QV LA+++MD VTQQNA+LV+E+AAAA +L+ Sbjct: 441 NNIVNAVTRVTDIMGEIASASDEQSRGIDQVALAVSEMDRVTQQNASLVQESAAAAAALE 500 Query: 241 GESVELTTIVSTFKI 255 ++ LT VS F++ Sbjct: 501 EQASRLTQAVSAFRL 515 >PA0176 [NT] COG0840 Methyl-accepting chemotaxis protein Pae Pseudomonas aeruginosa Length = 679 Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 155/225 (68%), Positives = 193/225 (85%) Query: 1 LASIVTRVRSGTHNIETAATEIAAGNLDLSSRTEEQAGALEETASAMEELTSTVKHNAEN 60 L+ ++ ++R I TAA+EIA+GN +LS+RTE+QA +LEETAS+MEELTSTVK NAEN Sbjct: 380 LSRMLGQIREAADTINTAASEIASGNAELSARTEQQASSLEETASSMEELTSTVKLNAEN 439 Query: 61 ARQASEMAVSASTVAGEGGTVVKQVIDTMEQINDSSKKIVDIISVIDGIAFQTNILALNA 120 ARQA+ +A +AS VA +GGTVV++V+ TM IN+S++KI DII VIDGIAFQTNILALNA Sbjct: 440 ARQANSLAANASEVATQGGTVVQKVVSTMSSINESARKIADIIGVIDGIAFQTNILALNA 499 Query: 121 AVEAARAGEQGRGFAVVATEVRSLAQRSAAAAKEIKILISDSVEKVETGSQLVAQAGQTI 180 AVEAARAGEQGRGFAVVA EVR+LAQRSAAAAKEIK LISDSV+KVE G+ LVAQAGQT+ Sbjct: 500 AVEAARAGEQGRGFAVVAGEVRTLAQRSAAAAKEIKTLISDSVDKVENGNTLVAQAGQTM 559 Query: 181 GNVVESVRRVSAIVSEISTASREQSDGISQVNLAITQMDNVTQQN 225 ++V ++RRV+ I+SEI+ AS EQS GI +VN A++QMD++TQQN Sbjct: 560 SDIVVAIRRVTDIMSEIAAASAEQSTGIEEVNSAVSQMDDMTQQN 604 >YPO1675 [NT] COG0840 Methyl-accepting chemotaxis protein Ype Yersinia pestis Length = 557 Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 162/253 (64%), Positives = 201/253 (79%) Query: 1 LASIVTRVRSGTHNIETAATEIAAGNLDLSSRTEEQAGALEETASAMEELTSTVKHNAEN 60 L +IV VR G I + A+EIA GN DLS+RTE+QA +LEETA++ME+LT+TVK NAEN Sbjct: 263 LVTIVGEVRVGADAIYSGASEIAVGNNDLSARTEQQAASLEETAASMEQLTATVKQNAEN 322 Query: 61 ARQASEMAVSASTVAGEGGTVVKQVIDTMEQINDSSKKIVDIISVIDGIAFQTNILALNA 120 ARQAS++A+SAS A +GG VV V+ TM +I SS+KI DI SVIDGIAFQTNILALNA Sbjct: 323 ARQASQLALSASETAQKGGKVVADVVQTMHEIAGSSQKIADITSVIDGIAFQTNILALNA 382 Query: 121 AVEAARAGEQGRGFAVVATEVRSLAQRSAAAAKEIKILISDSVEKVETGSQLVAQAGQTI 180 AVEAARAGEQGRGFAVVA EVR+LAQRSA AAKEIK LI DSV +V+ GS LV AG+T+ Sbjct: 383 AVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAKEIKGLIDDSVNRVDLGSVLVESAGETM 442 Query: 181 GNVVESVRRVSAIVSEISTASREQSDGISQVNLAITQMDNVTQQNAALVEEAAAAAKSLQ 240 G++V +V RV+ I+ EI++AS EQS GI Q+ A+ +MD VTQQNA+LVEE+A+AA SL+ Sbjct: 443 GDIVNAVTRVTDIMGEIASASDEQSRGIDQIGQAVAEMDRVTQQNASLVEESASAAASLE 502 Query: 241 GESVELTTIVSTF 253 ++ LT +S F Sbjct: 503 EQASMLTQAMSVF 515 >STM1919 [NT] COG0840 Methyl-accepting chemotaxis protein Sty Salmonella typhimurium LT2 Length = 553 Score = 295 bits (755), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 167/255 (65%), Positives = 206/255 (80%) Query: 1 LASIVTRVRSGTHNIETAATEIAAGNLDLSSRTEEQAGALEETASAMEELTSTVKHNAEN 60 L VT+VR G+ I + +EIAAGN DLSSRTE+QA ALEETA++ME+LT+TVK NA+N Sbjct: 261 LIDTVTQVREGSDAIYSGTSEIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADN 320 Query: 61 ARQASEMAVSASTVAGEGGTVVKQVIDTMEQINDSSKKIVDIISVIDGIAFQTNILALNA 120 ARQAS++A SAS A GG VV V++TM +I DSSKKI DIISVIDGIAFQTNILALNA Sbjct: 321 ARQASQLAQSASETARHGGKVVDGVVNTMHEIADSSKKIADIISVIDGIAFQTNILALNA 380 Query: 121 AVEAARAGEQGRGFAVVATEVRSLAQRSAAAAKEIKILISDSVEKVETGSQLVAQAGQTI 180 AVEAARAGEQGRGFAVVA EVR+LA RSA AAKEIK LI DSV +V+TGS LV AG+T+ Sbjct: 381 AVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIKALIEDSVSRVDTGSVLVESAGETM 440 Query: 181 GNVVESVRRVSAIVSEISTASREQSDGISQVNLAITQMDNVTQQNAALVEEAAAAAKSLQ 240 ++V +V RV+ I+ EI++AS EQS GI QV LA+++MD VTQQNA+LV+E+AAAA +L+ Sbjct: 441 TDIVNAVTRVTDIMGEIASASDEQSRGIDQVALAVSEMDRVTQQNASLVQESAAAAAALE 500 Query: 241 GESVELTTIVSTFKI 255 ++ LT VS F++ Sbjct: 501 EQASRLTQAVSAFRL 515 >RSc0606 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 617 Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 155/225 (68%), Positives = 184/225 (81%) Query: 1 LASIVTRVRSGTHNIETAATEIAAGNLDLSSRTEEQAGALEETASAMEELTSTVKHNAEN 60 L +++ ++R G+ ++ +AA EIAAGN DLS RTEEQA +LEETAS+MEELTS VK NA+N Sbjct: 361 LTAVLQQIRLGSDSVRSAAQEIAAGNADLSQRTEEQASSLEETASSMEELTSIVKQNADN 420 Query: 61 ARQASEMAVSASTVAGEGGTVVKQVIDTMEQINDSSKKIVDIISVIDGIAFQTNILALNA 120 ARQAS +AV+AS VA GG+VV QV+ TM IN+SSKKI DII VI+ IAFQTNILALNA Sbjct: 421 ARQASSLAVNASDVATRGGSVVGQVVQTMGGINESSKKIADIIGVIESIAFQTNILALNA 480 Query: 121 AVEAARAGEQGRGFAVVATEVRSLAQRSAAAAKEIKILISDSVEKVETGSQLVAQAGQTI 180 AVEAARAGEQGRGFAVVA+EVRSLAQRSA AAKEIK LI DSV++V G+ LV QAG T+ Sbjct: 481 AVEAARAGEQGRGFAVVASEVRSLAQRSAGAAKEIKALIHDSVDRVSNGTALVDQAGVTM 540 Query: 181 GNVVESVRRVSAIVSEISTASREQSDGISQVNLAITQMDNVTQQN 225 +VE+V+RV+ I+ EIS AS EQS GI QVN A+ QMD VTQQN Sbjct: 541 AEIVEAVKRVTDIMGEISAASEEQSSGIEQVNQAVNQMDQVTQQN 585 >RSp1209 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 524 Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 173/255 (67%), Positives = 208/255 (81%) Query: 1 LASIVTRVRSGTHNIETAATEIAAGNLDLSSRTEEQAGALEETASAMEELTSTVKHNAEN 60 L +V +VR+G+ +I +A +IAAGN DLS RTE+QA +LEETAS+MEELTS VK NA+N Sbjct: 267 LQKMVGQVRTGSDSIASATKQIAAGNADLSQRTEQQASSLEETASSMEELTSIVKQNADN 326 Query: 61 ARQASEMAVSASTVAGEGGTVVKQVIDTMEQINDSSKKIVDIISVIDGIAFQTNILALNA 120 ARQAS +AV+AS VA +GG VV +V++TM IN SSKKI DII VI+GIAFQTNILALNA Sbjct: 327 ARQASTLAVNASDVAVKGGEVVGRVVETMAGINGSSKKIADIIGVIEGIAFQTNILALNA 386 Query: 121 AVEAARAGEQGRGFAVVATEVRSLAQRSAAAAKEIKILISDSVEKVETGSQLVAQAGQTI 180 AVEAARAGEQGRGFAVVA EVRSLAQRSA AAKEIK LISDSV++V+ GS+LVA+AG I Sbjct: 387 AVEAARAGEQGRGFAVVAGEVRSLAQRSAGAAKEIKELISDSVDRVQNGSKLVAEAGTVI 446 Query: 181 GNVVESVRRVSAIVSEISTASREQSDGISQVNLAITQMDNVTQQNAALVEEAAAAAKSLQ 240 VV +V+RV+ I+ EIS AS EQS GI QVN A+ QMD VTQQNAALVE+AAAAA+SL+ Sbjct: 447 DEVVVAVKRVTDIMGEISAASDEQSSGIEQVNQAVNQMDEVTQQNAALVEQAAAAAESLE 506 Query: 241 GESVELTTIVSTFKI 255 ++ L VS F++ Sbjct: 507 AQAEALRQAVSAFRV 521