BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0309.p (89 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2069 [J] COG0184 Ribosomal protein S15P/S13E Rso Ralstonia so... 137 6e-33 VC0646 [J] COG0184 Ribosomal protein S15P/S13E Vch Vibrio cholerae 120 1e-27 YPO3493 [J] COG0184 Ribosomal protein S15P/S13E Ype Yersinia pestis 119 1e-27 STM3283 [J] COG0184 Ribosomal protein S15P/S13E Sty Salmonella t... 117 6e-27 rpsO [J] COG0184 Ribosomal protein S15P/S13E Eco Escherichia col... 117 6e-27 ZrpsO [J] COG0184 Ribosomal protein S15P/S13E EcZ Escherichia co... 117 9e-27 ECs4046 [J] COG0184 Ribosomal protein S15P/S13E Ecs Escherichia ... 117 9e-27 XF0238 [J] COG0184 Ribosomal protein S15P/S13E Xfa Xylella fasti... 115 2e-26 BH2408 [J] COG0184 Ribosomal protein S15P/S13E Bha Bacillus halo... 113 9e-26 PA4741 [J] COG0184 Ribosomal protein S15P/S13E Pae Pseudomonas a... 112 3e-25 >RSc2069 [J] COG0184 Ribosomal protein S15P/S13E Rso Ralstonia solanacearum Length = 89 Score = 137 bits (345), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 65/89 (73%), Positives = 75/89 (84%) Query: 1 MSIEKAAKAAIISENARGTNDTGSPEVQVALLTARINDLNGHFKAHVKDHHSRRGLIKMV 60 MS+ K ++ + ARGTNDTGSPEVQVALLTARIN+L HFKAH+KDHHSRRGL+KMV Sbjct: 1 MSVADINKQEVVKQFARGTNDTGSPEVQVALLTARINELTPHFKAHMKDHHSRRGLLKMV 60 Query: 61 NRRKSLLSYLKNKDADRYRALIEKLGLRK 89 +RR+ LL YLK DADRYR+LIEKLGLRK Sbjct: 61 SRRRRLLDYLKKNDADRYRSLIEKLGLRK 89 >VC0646 [J] COG0184 Ribosomal protein S15P/S13E Vch Vibrio cholerae Length = 89 Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 57/89 (64%), Positives = 70/89 (78%) Query: 1 MSIEKAAKAAIISENARGTNDTGSPEVQVALLTARINDLNGHFKAHVKDHHSRRGLIKMV 60 MS+ KAAI++E AR NDTGSPEVQ+ALLTA IN L GHF+AH DHHSRRGL++MV Sbjct: 1 MSLNAETKAAIVAEYARCENDTGSPEVQIALLTASINHLQGHFQAHKGDHHSRRGLLRMV 60 Query: 61 NRRKSLLSYLKNKDADRYRALIEKLGLRK 89 + R+ LL YLK KD RY+ LI++LGLR+ Sbjct: 61 SSRRKLLDYLKGKDLSRYQDLIKRLGLRR 89 >YPO3493 [J] COG0184 Ribosomal protein S15P/S13E Ype Yersinia pestis Length = 89 Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 57/89 (64%), Positives = 70/89 (78%) Query: 1 MSIEKAAKAAIISENARGTNDTGSPEVQVALLTARINDLNGHFKAHVKDHHSRRGLIKMV 60 MS+ AKA I+++ RGTNDTGS EVQVALLTA+IN L GHF H KDHHSRRGL++MV Sbjct: 1 MSLSVEAKAKIVADFGRGTNDTGSSEVQVALLTAQINHLQGHFSEHKKDHHSRRGLLRMV 60 Query: 61 NRRKSLLSYLKNKDADRYRALIEKLGLRK 89 + R+ LL YLK +D RY +LIE+LGLR+ Sbjct: 61 STRRKLLDYLKRQDVARYASLIERLGLRR 89 >STM3283 [J] COG0184 Ribosomal protein S15P/S13E Sty Salmonella typhimurium LT2 Length = 89 Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 57/89 (64%), Positives = 68/89 (76%) Query: 1 MSIEKAAKAAIISENARGTNDTGSPEVQVALLTARINDLNGHFKAHVKDHHSRRGLIKMV 60 MS+ A A I+SE R NDTGS +VQVALLTA+IN L GHF H KDHHSRRGL++MV Sbjct: 1 MSLSTEATAKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMV 60 Query: 61 NRRKSLLSYLKNKDADRYRALIEKLGLRK 89 ++R+ LL YLK KD RY ALIE+LGLR+ Sbjct: 61 SQRRKLLDYLKRKDVARYTALIERLGLRR 89 >rpsO [J] COG0184 Ribosomal protein S15P/S13E Eco Escherichia coli K12 Length = 89 Score = 117 bits (293), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 57/89 (64%), Positives = 67/89 (75%) Query: 1 MSIEKAAKAAIISENARGTNDTGSPEVQVALLTARINDLNGHFKAHVKDHHSRRGLIKMV 60 MS+ A A I+SE R NDTGS EVQVALLTA+IN L GHF H KDHHSRRGL++MV Sbjct: 1 MSLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMV 60 Query: 61 NRRKSLLSYLKNKDADRYRALIEKLGLRK 89 ++R+ LL YLK KD RY LIE+LGLR+ Sbjct: 61 SQRRKLLDYLKRKDVARYTQLIERLGLRR 89 >ZrpsO [J] COG0184 Ribosomal protein S15P/S13E EcZ Escherichia coli O157:H7 EDL933 Length = 89 Score = 117 bits (292), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 57/89 (64%), Positives = 67/89 (75%) Query: 1 MSIEKAAKAAIISENARGTNDTGSPEVQVALLTARINDLNGHFKAHVKDHHSRRGLIKMV 60 MS+ A A I+SE R NDTGS EVQVALLTA+IN L GHF H KDHHSRRGL++MV Sbjct: 1 MSLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMV 60 Query: 61 NRRKSLLSYLKNKDADRYRALIEKLGLRK 89 ++R+ LL YLK KD RY LIE+LGLR+ Sbjct: 61 SQRRKLLDYLKRKDVARYTRLIERLGLRR 89 >ECs4046 [J] COG0184 Ribosomal protein S15P/S13E Ecs Escherichia coli O157:H7 Length = 89 Score = 117 bits (292), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 57/89 (64%), Positives = 67/89 (75%) Query: 1 MSIEKAAKAAIISENARGTNDTGSPEVQVALLTARINDLNGHFKAHVKDHHSRRGLIKMV 60 MS+ A A I+SE R NDTGS EVQVALLTA+IN L GHF H KDHHSRRGL++MV Sbjct: 1 MSLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMV 60 Query: 61 NRRKSLLSYLKNKDADRYRALIEKLGLRK 89 ++R+ LL YLK KD RY LIE+LGLR+ Sbjct: 61 SQRRKLLDYLKRKDVARYTRLIERLGLRR 89 >XF0238 [J] COG0184 Ribosomal protein S15P/S13E Xfa Xylella fastidiosa 9a5c Length = 86 Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/89 (66%), Positives = 68/89 (76%), Gaps = 3/89 (3%) Query: 1 MSIEKAAKAAIISENARGTNDTGSPEVQVALLTARINDLNGHFKAHVKDHHSRRGLIKMV 60 MSI+ + II N R +DTGSPEVQVALLTARI L HFK H KDHHSRRGL++MV Sbjct: 1 MSIDTQS---IIENNKRSAHDTGSPEVQVALLTARIELLTKHFKIHKKDHHSRRGLLQMV 57 Query: 61 NRRKSLLSYLKNKDADRYRALIEKLGLRK 89 NRR+SLL YL KD +RY+ LIEKLGLR+ Sbjct: 58 NRRRSLLDYLNKKDNERYKLLIEKLGLRR 86 >BH2408 [J] COG0184 Ribosomal protein S15P/S13E Bha Bacillus halodurans Length = 89 Score = 113 bits (283), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 53/89 (59%), Positives = 69/89 (77%) Query: 1 MSIEKAAKAAIISENARGTNDTGSPEVQVALLTARINDLNGHFKAHVKDHHSRRGLIKMV 60 M++ + K II+E NDTGSPEVQVA+LT +IN LN H + H KDHHSRRGL+KMV Sbjct: 1 MALTQERKNEIINEFKTHENDTGSPEVQVAILTEQINTLNEHLRTHKKDHHSRRGLLKMV 60 Query: 61 NRRKSLLSYLKNKDADRYRALIEKLGLRK 89 +R++LL+YL+NKD RYR L++KLGLR+ Sbjct: 61 GQRRNLLTYLRNKDVTRYRNLVDKLGLRR 89 >PA4741 [J] COG0184 Ribosomal protein S15P/S13E Pae Pseudomonas aeruginosa Length = 89 Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 55/89 (61%), Positives = 67/89 (75%) Query: 1 MSIEKAAKAAIISENARGTNDTGSPEVQVALLTARINDLNGHFKAHVKDHHSRRGLIKMV 60 M++ KA I++E + DTGSPEVQVALL+A IN L HFKA+ KDHHSRRGLI+MV Sbjct: 1 MALSVEEKAQIVNEYKQAEGDTGSPEVQVALLSANINKLQDHFKANGKDHHSRRGLIRMV 60 Query: 61 NRRKSLLSYLKNKDADRYRALIEKLGLRK 89 N+R+ LL YLK KD RY ALI +LGLR+ Sbjct: 61 NQRRKLLDYLKGKDVSRYTALIGRLGLRR 89