BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0299.p (516 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0599 [KE] COG1167 Transcriptional regulators containing a DNA... 592 e-169 PA2897 [KE] COG1167 Transcriptional regulators containing a DNA-... 328 2e-89 PA4132 [KE] COG1167 Transcriptional regulators containing a DNA-... 315 2e-85 PA2032 [KE] COG1167 Transcriptional regulators containing a DNA-... 309 8e-84 YPO1960 [KE] COG1167 Transcriptional regulators containing a DNA... 295 1e-79 VCA0871 [KE] COG1167 Transcriptional regulators containing a DNA... 291 3e-78 ZyjiR [KE] COG1167 Transcriptional regulators containing a DNA-b... 287 3e-77 ECs5302 [KE] COG1167 Transcriptional regulators containing a DNA... 287 3e-77 yjiR [KE] COG1167 Transcriptional regulators containing a DNA-bi... 287 4e-77 ydcR [KE] COG1167 Transcriptional regulators containing a DNA-bi... 274 3e-73 >RSc0599 [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Rso Ralstonia solanacearum Length = 504 Score = 592 bits (1525), Expect = e-169, Method: Compositional matrix adjust. Identities = 295/502 (58%), Positives = 362/502 (72%), Gaps = 4/502 (0%) Query: 15 SGVAATPTAPTTPASLLPSAPESGRQPLYRRLADHYQSAIQAGTLVAGDRMPSVRDLMRQ 74 S AA TPA P+ G QPLYR LADHY A+++G L G RMPSVR LMR Sbjct: 7 SAPAAMSVIELTPA---PAVRPPGAQPLYRMLADHYLGAMRSGVLTPGQRMPSVRTLMRT 63 Query: 75 HQVSLSTALQTLRHMEEGGWLEARPRSGYFVRQPRRSAIRPVQEPKSLLAIDAGQFVGIH 134 H VSLSTALQ RH+E GWLEAR RSGYFVRQPRR+ + P +EP+ + D +VG+H Sbjct: 64 HSVSLSTALQVCRHLEAEGWLEARERSGYFVRQPRRALLAPAKEPE-VATPDPAAYVGVH 122 Query: 135 ERVSKYIALRQAGAPHIDLSGMTCAPQLYAVETLKQAAMRALRERPELLTSAMPHNGNAT 194 RVS IA +DLSG + A LY L + A + LR RP LLT A+ NG+ Sbjct: 123 ARVSAIIARGLQARARVDLSGASGAATLYPSAVLNRIATQMLRARPLLLTQAVTPNGHPD 182 Query: 195 FRQAVARRALNAGMRIDTEEVVVTHGCIEALNLALRAVAGPGDTIAVESPTYFGLLQALE 254 + AVARRAL G+++ ++VVVTHGCIEA+NLALRAVA PGDT+AVESPTY+GLLQ LE Sbjct: 183 LQSAVARRALEMGVQVAPDDVVVTHGCIEAVNLALRAVAQPGDTVAVESPTYYGLLQVLE 242 Query: 255 NLGMKALEIPTSPHTGISVEALELAVRTYGNIKAVVVVPNLQNPLGCIMPEDHKDQLVRL 314 LGM+A+EIPTSP TGIS+EALE+AV+ YGNI+AVVVVPNLQNPLG IMP+ K +L Sbjct: 243 CLGMRAVEIPTSPRTGISLEALEMAVQAYGNIRAVVVVPNLQNPLGSIMPDAAKRRLAAF 302 Query: 315 CDQLKLPLIEDDAYTELADGSVTPSSLKSRDRNGNVIYCASLNKVLAPGMRLGWMNGGRW 374 C+ +PLIEDD Y+ L DG ++K+ DR GNVIYCASLNK +APG+RLGWM GGRW Sbjct: 303 CEAHAIPLIEDDTYSALGDGPAPLKAIKAWDRTGNVIYCASLNKTIAPGLRLGWMTGGRW 362 Query: 375 HERVKMLKFTHTRANEEWTQVTAADFIASPAYDRHLRRLRQMLKQQRERMAESIAAYFPE 434 ERV+MLKF +R N+ W+QVTAA +AS AYDRH+R LRQ L++QRERMAE+IA FP Sbjct: 363 QERVEMLKFAQSRPNDSWSQVTAARLLASGAYDRHIRTLRQTLREQRERMAEAIAGCFPA 422 Query: 435 GTRLNLPNGGVGLWVELPVQVCSQQLFERALAEGVGVSPGAIFSNSSRYGHFVRICCGHP 494 GTRL++P GGV +WVELP V S LFE ALA G+ ++PG +FSN +R+ H+ RIC G P Sbjct: 423 GTRLSVPAGGVAMWVELPASVSSMALFEMALAHGIRIAPGTMFSNLNRFDHYFRICFGLP 482 Query: 495 FNRELDQALRRLGGLVHHLADA 516 + E++ AL +LG L H LA+A Sbjct: 483 YTAEVETALAQLGRLAHQLAEA 504 >PA2897 [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Pae Pseudomonas aeruginosa Length = 479 Score = 328 bits (841), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 183/477 (38%), Positives = 275/477 (57%), Gaps = 16/477 (3%) Query: 42 LYRRLADHYQSAIQAGTLVAGDRMPSVRDLMRQHQVSLSTALQTLRHMEEGGWLEARPRS 101 LY+R+A I+ G G+R+PSVR L Q VS +T LQ +E+ G + ARP+S Sbjct: 6 LYQRIAQQLAEDIRRGVYQPGERVPSVRKLSTQLNVSHATVLQAYATLEDQGLIRARPQS 65 Query: 102 GYFV-RQPRRSAIRP----VQEPKSLLAIDAGQFVGIHERVSKYIALRQAGAPHIDLSGM 156 G++V R P +A P V+ P + V R L A PH+D Sbjct: 66 GFYVHRTPALTAPTPDIARVERPGLVTRSSIINQVLAESRREGVFPL-GAAVPHVDY--- 121 Query: 157 TCAPQLYAVETLKQAAMRALRERPELLTSAMPHNGNATFRQAVARRALNAGMRIDTEEVV 216 V L Q + R + S M G R+ VA R +AG+ +D +V Sbjct: 122 ------LPVRALHQQLAKVTRFQSPRAFSYMFSPGFEPLRRQVAIRMRDAGVVVDPSQVT 175 Query: 217 VTHGCIEALNLALRAVAGPGDTIAVESPTYFGLLQALENLGMKALEIPTSPHTGISVEAL 276 +THGC++A+++ALR + PGD IA ESP+Y+GLLQ + LG+K +EIP+ P TGIS+EAL Sbjct: 176 ITHGCVDAIHMALRVLTRPGDLIATESPSYYGLLQLADVLGLKVIEIPSDPRTGISLEAL 235 Query: 277 ELAVRTYGNIKAVVVVPNLQNPLGCIMPEDHKDQLVRLCDQLKLPLIEDDAYTELADGSV 336 +LA + +IKA+V+ L NP G +PED + QL++L + + ++EDD Y EL Sbjct: 236 QLAANQW-SIKALVLTARLSNPFGGTIPEDRQKQLLKLTAEHNIGVVEDDIYGELMFDQG 294 Query: 337 TPSSLKSRDRNGNVIYCASLNKVLAPGMRLGWMNGGRWHERVKMLKFTHTRANEEWTQVT 396 SLKS DR+G VIYC+S +K ++PG+R+GW+ R+ E ++ L+ T + TQ+ Sbjct: 295 QARSLKSHDRDGRVIYCSSFSKTISPGVRIGWIIAERYQEEIRRLQTFTTHSACTVTQMG 354 Query: 397 AADFIASPAYDRHLRRLRQMLKQQRERMAESIAAYFPEGTRLNLPNGGVGLWVELPVQVC 456 A ++ + YDRHLR +RQ ++ ++ YFPEGT++ P GG LWV LP +V Sbjct: 355 VAAYLENGGYDRHLRYIRQEYRKNMTAYQLAVQQYFPEGTQMTRPKGGFILWVSLPAKVN 414 Query: 457 SQQLFERALAEGVGVSPGAIFSNSSRYGHFVRICCGHPFNRELDQALRRLGGLVHHL 513 +++L RAL +G+ ++PG IFSN+ ++ + +R+ CG P+NRE ++A+ LG L L Sbjct: 415 TKELHVRALEQGISIAPGLIFSNTEQFNNCLRLTCGIPWNREAERAIMTLGMLAGQL 471 >PA4132 [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Pae Pseudomonas aeruginosa Length = 471 Score = 315 bits (807), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 181/475 (38%), Positives = 274/475 (57%), Gaps = 11/475 (2%) Query: 43 YRRLADHYQSAIQAGTLVAGDRMPSVRDLMRQHQVSLSTALQTLRHMEEGGWLEARPRSG 102 Y + AD I+ G L G ++PSVR R + VS ST Q +E G + AR RSG Sbjct: 4 YEKFADEIAELIRTGVLAPGQKVPSVRHASRTYGVSASTVFQAYYLLESRGLIMARARSG 63 Query: 103 YFVRQPRRSAIRPVQEPK-SLLAIDAGQFVGIHERVSKYIALRQAGAPH-IDLSGMTCAP 160 YFV Q RP+ EP+ S DA + V + E V + L P + +P Sbjct: 64 YFVCQ---HVQRPLPEPEISPRQADATE-VDVSELV--FSVLSSIKDPDTVPFGSAFPSP 117 Query: 161 QLYAVETLKQAAMRALRER-PELLTSAMPHNGNATFRQAVARRALNAGMRIDTEEVVVTH 219 QL+ + L ++ A+R+ P+ + + M GN R+ +A R + G+ + EE+V+++ Sbjct: 118 QLFPLPRLARSMAHAVRDMDPQSVVADM-TPGNHGLRRQIALRYMVGGLLLPVEELVISN 176 Query: 220 GCIEALNLALRAVAGPGDTIAVESPTYFGLLQALENLGMKALEIPTSPHTGISVEALELA 279 G +EALNL L+ V PGD +A+E+P ++ LQ LE L +KA+EIP P GI +E L + Sbjct: 177 GALEALNLCLQVVTRPGDLVAIEAPAFYATLQVLERLKLKAVEIPVHPREGIDLEVLADS 236 Query: 280 VRTYGNIKAVVVVPNLQNPLGCIMPEDHKDQLVRLCDQLKLPLIEDDAYTELADGSVTPS 339 + IKA + N QNP+G M ++ K L L + ++P+IEDD Y EL G P Sbjct: 237 LERL-PIKACWFMSNFQNPMGASMDDEKKRALAELLARHQVPMIEDDVYAELYFGQQAPK 295 Query: 340 SLKSRDRNGNVIYCASLNKVLAPGMRLGWMNGGRWHERVKMLKFTHTRANEEWTQVTAAD 399 +K+ D+ G V++C+S +K LAPG R+GW+ GGR+ E+++ LK + + Q AD Sbjct: 296 PVKAYDQEGLVMHCSSFSKSLAPGYRVGWVAGGRYAEQIERLKLMTSLSASIPAQAAIAD 355 Query: 400 FIASPAYDRHLRRLRQMLKQQRERMAESIAAYFPEGTRLNLPNGGVGLWVELPVQVCSQQ 459 ++ YDRHLR+LR L+ Q+ M ++A YFPE TR++ P+GG LW+ELP V S + Sbjct: 356 YLQHGGYDRHLRKLRYALETQQNAMLAAVARYFPEQTRVSRPSGGYFLWLELPEAVDSLR 415 Query: 460 LFERALAEGVGVSPGAIFSNSSRYGHFVRICCGHPFNRELDQALRRLGGLVHHLA 514 LF+ ALA+G+ ++PG IFS + R+ H R+ GHP++ ++A+ LG + LA Sbjct: 416 LFQLALAQGISLAPGPIFSATRRFAHCARLNYGHPWSARQEKAMETLGRITQSLA 470 >PA2032 [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Pae Pseudomonas aeruginosa Length = 474 Score = 309 bits (792), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 189/469 (40%), Positives = 273/469 (58%), Gaps = 12/469 (2%) Query: 42 LYRRLADHYQSAIQAGTLVAGDRMPSVRDLMRQHQVSLSTALQTLRHMEEGGWLEARPRS 101 LY +LA+ S I+ G GDR+PSVR + +H VSLST Q R +E+ G E RP+S Sbjct: 3 LYLQLAETLGSRIEQGLYRPGDRLPSVRAMSIEHGVSLSTVQQAYRLLEDRGLAEPRPKS 62 Query: 102 GYFVRQPRRSAIRPVQEPKSLLAIDAGQFVGIHERVSKYI--ALRQAGAPHIDLSGMTCA 159 GYFV R+ P + ++ Q+ + VS + Q G D+S + Sbjct: 63 GYFVPAARQMPPLPAIARLAQRPVEISQWEQVLALVSTVPRPDVVQLGRGMPDISSPSLK 122 Query: 160 PQLYAVETL-KQAAMRALRERPELLTSAMPHNGNATFRQAVARRALNAGMRIDTEEVVVT 218 P ++ L + A RAL + +G+ R+ VAR +++G R +VV+T Sbjct: 123 PLTRSLARLNRHADARAL--------AYDGIHGSPLLREEVARLLVDSGCRATASDVVIT 174 Query: 219 HGCIEALNLALRAVAGPGDTIAVESPTYFGLLQALENLGMKALEIPTSPHTGISVEALEL 278 GC EAL++++RAV PGD +AVESP++ G +Q+L+ LGMKALEIPT P GIS+EALEL Sbjct: 175 TGCHEALSVSIRAVCEPGDIVAVESPSFHGAMQSLKGLGMKALEIPTDPVNGISLEALEL 234 Query: 279 AVRTYGNIKAVVVVPNLQNPLGCIMPEDHKDQLVRLCDQLKLPLIEDDAYTELADGSVTP 338 A+ + IKA+ V PN NPLG IMPE K L+ L + + +IEDD Y +LA P Sbjct: 235 ALEQW-PIKAIQVTPNCNNPLGYIMPESRKRALLALAQRYDVAIIEDDVYGDLAYTYPRP 293 Query: 339 SSLKSRDRNGNVIYCASLNKVLAPGMRLGWMNGGRWHERVKMLKFTHTRANEEWTQVTAA 398 ++KS D +G V+ C S +KVLAPG+R+GWM GR+ +RV +K+ T A+ Q+ A Sbjct: 294 RTIKSYDDDGRVLLCGSFSKVLAPGLRIGWMVPGRYADRVLHMKYISTGASALQPQLAIA 353 Query: 399 DFIASPAYDRHLRRLRQMLKQQRERMAESIAAYFPEGTRLNLPNGGVGLWVELPVQVCSQ 458 +FI + Y+ HLRR+R ++ R+ M + +A YFPEGTR + P GG LWVEL + Sbjct: 354 EFIGNGHYEPHLRRMRAQYQRGRDLMIDWVARYFPEGTRASRPQGGFLLWVELDEAFDTL 413 Query: 459 QLFERALAEGVGVSPGAIFSNSSRYGHFVRICCGHPFNRELDQALRRLG 507 +L + GV V+ G IFS S +Y + +R+ ++QA+RR+G Sbjct: 414 RLDKALRNRGVQVAVGCIFSASGKYRNCLRMNYAALPTPAIEQAVRRVG 462 >YPO1960 [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Ype Yersinia pestis Length = 473 Score = 295 bits (756), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 164/482 (34%), Positives = 273/482 (56%), Gaps = 24/482 (4%) Query: 43 YRRLADHYQSAIQAGTLVAGDRMPSVRDLMRQHQVSLSTALQTLRHMEEGGWLEARPRSG 102 Y +LA ++ IQ+ AGD++PS+R+ +Q +SL T +Q+ + +E GW+ ARP+SG Sbjct: 4 YEQLAQQIRAQIQSKVWQAGDKLPSLRESCKQSGLSLMTVVQSYQLLESQGWIVARPQSG 63 Query: 103 YFVRQPRRSAIRPVQEPKSLLA--------IDAGQFVGIHERVSKYIALRQAGAPHIDLS 154 Y+V A RP Q P+ +D F+ + K A+ G+ D Sbjct: 64 YYV------ASRPTQLPQPQRGNKLHLDEQVDINTFIFNVLQAGKDPAIMPFGSAFPD-- 115 Query: 155 GMTCAPQLYAVETLKQAAMRALRE-RPELLTSAMPHNGNATFRQAVARRALNAGMRIDTE 213 P L L +A R+ P+ + +P GN + R+ +A+R GM + E Sbjct: 116 -----PSLLLQPRLSRALASVARKISPQSSVTNLP-PGNESLRRNIAQRYAACGMNVSPE 169 Query: 214 EVVVTHGCIEALNLALRAVAGPGDTIAVESPTYFGLLQALENLGMKALEIPTSPHTGISV 273 E+V+T G +E+L+L+L+AV PGD + +ESP ++G LQA+E L +KA+ I T P G+ + Sbjct: 170 EIVITAGAMESLSLSLQAVTQPGDWVVIESPAFYGALQAIERLRLKAIAITTDPQQGVDL 229 Query: 274 EALELAVRTYGNIKAVVVVPNLQNPLGCIMPEDHKDQLVRLCDQLKLPLIEDDAYTELAD 333 EALE + Y IKA ++P+ QNP+G MP K +LV L Q + LIEDD Y EL Sbjct: 230 EALEQVISQY-PIKACWLMPHFQNPMGATMPWSQKQRLVTLLQQKAISLIEDDVYGELYF 288 Query: 334 GSVTPSSLKSRDRNGNVIYCASLNKVLAPGMRLGWMNGGRWHERVKMLKFTHTRANEEWT 393 G+ K+ D++ +++C+S +K LAPG R+GW+ G +R++ L+ T + T Sbjct: 289 GAERLLPAKALDQHRQILHCSSFSKCLAPGFRVGWVAAGEHAQRIQHLQLMSTVSASVPT 348 Query: 394 QVTAADFIASPAYDRHLRRLRQMLKQQRERMAESIAAYFPEGTRLNLPNGGVGLWVELPV 453 Q+ AD+++ YD HLRRLR++++Q+ + +++ +FP+ +++ P GG LW+EL Sbjct: 349 QLAIADYLSQGGYDTHLRRLRRVMEQRMSTLHQAVVEHFPKNIKISHPAGGYFLWLELEP 408 Query: 454 QVCSQQLFERALAEGVGVSPGAIFSNSSRYGHFVRICCGHPFNRELDQALRRLGGLVHHL 513 + +L+ RAL +GV ++PG +F+ S++ H R+ ++ + +A+R L L+ L Sbjct: 409 PFNASELYRRALEQGVSIAPGRMFTTGSQFDHCFRLNASFAWSEQSAKAIRILAKLIGQL 468 Query: 514 AD 515 + Sbjct: 469 TN 470 >VCA0871 [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Vch Vibrio cholerae Length = 473 Score = 291 bits (745), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 159/476 (33%), Positives = 280/476 (58%), Gaps = 26/476 (5%) Query: 46 LADHYQSAIQAGTLVAGDRMPSVRDLMRQHQVSLSTALQTLRHMEEGGWLEARPRSGYFV 105 LA+ +S I+ ++G+++PS+R +++++S+ T LQ + +E+ G++ A+ +SGY V Sbjct: 8 LANTIKSQIEQNIWLSGEKIPSIRSTCKRYKLSIETVLQAYQQLEDQGYIRAKAKSGYVV 67 Query: 106 RQPRRSAIRPVQEPKSLLA--IDAGQFVGIHERVSK--YIALRQAGAPHI-DLSGMTCAP 160 PRR+ +L A + A ++S Y L++A P I S P Sbjct: 68 L-PRRN---------TLFAGNLSAKVIKPYPVKISDLLYDVLQRAKDPEIIPFSSAFPDP 117 Query: 161 QLYAVETLKQAAMRALRERPELLTSAMPHN---GNATFRQAVARRALNAGMRIDTEEVVV 217 L+ + L ++ A R+ +L S M N G+ T R+ +A+R +G+ + +++V+ Sbjct: 118 ALFPHQALSRSLANASRQ---MLGSCMLTNLPPGSQTLRRQIAQRYQKSGLNVLPDDIVI 174 Query: 218 THGCIEALNLALRAVAGPGDTIAVESPTYFGLLQALENLGMKALEIPTSPHTGISVEALE 277 T G +EALNL L++ PGD +A+E P ++G+LQA+E L + A+EIPT P GI ++ L Sbjct: 175 TSGAMEALNLCLQSCTKPGDLVAIEYPAFYGVLQAIERLNLTAVEIPTDPRDGIDLDVLA 234 Query: 278 LAVRTYGNIKAVVVVPNLQNPLGCIMPEDHKDQLVRLCDQLKLPLIEDDAYTELADGSVT 337 +V + +IKA + QNPLG M E +K +L L + ++P+IEDD Y EL G+ Sbjct: 235 -SVFSSMDIKACWFMTESQNPLGYSMSETNKQRLAELVNHYQIPMIEDDVYRELGIGN-- 291 Query: 338 PSSL--KSRDRNGNVIYCASLNKVLAPGMRLGWMNGGRWHERVKMLKFTHTRANEEWTQV 395 PSSL K+ D+ GN++ C S +K L+PG R+GW+ G ++ L+ T ++ Q+ Sbjct: 292 PSSLPAKAYDKVGNILLCGSFSKSLSPGFRIGWVVAGERALNIQRLQHLSTLSSSIPIQL 351 Query: 396 TAADFIASPAYDRHLRRLRQMLKQQRERMAESIAAYFPEGTRLNLPNGGVGLWVELPVQV 455 + ++ +D HL++LR++L ++++ AE + Y P T+++L NGG +WVELP + Sbjct: 352 GLSHYLTFYNFDHHLKKLRKLLNERKKAHAELLRTYLPHNTKIHLNNGGYFIWVELPQTI 411 Query: 456 CSQQLFERALAEGVGVSPGAIFSNSSRYGHFVRICCGHPFNRELDQALRRLGGLVH 511 ++ L+E+AL + ++PG +FS+ R+ H +R+ C + + ++QA++ LG L+H Sbjct: 412 YAETLYEQALEHNIAIAPGILFSSDKRFSHHIRLNCSYACDERIEQAIQTLGQLIH 467 >ZyjiR [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs EcZ Escherichia coli O157:H7 EDL933 Length = 470 Score = 287 bits (735), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 166/474 (35%), Positives = 261/474 (55%), Gaps = 16/474 (3%) Query: 43 YRRLADHYQSAIQAGTLVAGDRMPSVRDLMRQHQVSLSTALQTLRHMEEGGWLEARPRSG 102 Y+ LA I+ G G+++PSVR L ++H VS+ST Q + +E + +PRSG Sbjct: 4 YQHLATLLAERIEQGLYRHGEKLPSVRSLSQEHGVSISTVQQAYQTLETMKLITPQPRSG 63 Query: 103 YFVRQ-----PRRSAIRPVQEPKSLLAIDAGQFVGIHERVSKYIALRQAGAPHIDLSGMT 157 YFV Q P RPVQ P + D + + S + L ++ P ++ Sbjct: 64 YFVAQRKAQPPVPPMTRPVQRPVEITQWDLVLDMLVAHSDSSIVPLSKS-TPDVE----- 117 Query: 158 CAPQLYAVETLKQAAMRALRERPELLTSAMPHNGNATFRQAVARRALNAGMRIDTEEVVV 217 P L + L + R ++ + + G R+ VAR L++G + +++++ Sbjct: 118 -TPSL---KPLWRELSRVVQHNLQTVLGYDLLAGQRVLREQVARLMLDSGSVVTADDIII 173 Query: 218 THGCIEALNLALRAVAGPGDTIAVESPTYFGLLQALENLGMKALEIPTSPHTGISVEALE 277 T GC +++LAL AV PGD +AVESP Y+G +Q L +G+K +EIPT P TGISVEALE Sbjct: 174 TSGCHNSMSLALMAVCKPGDIVAVESPCYYGSMQMLRGMGVKVIEIPTDPETGISVEALE 233 Query: 278 LAVRTYGNIKAVVVVPNLQNPLGCIMPEDHKDQLVRLCDQLKLPLIEDDAYTELADGSVT 337 LA+ + IK +++VPN NPLG IMP+ K ++ L + + + EDD Y ELA Sbjct: 234 LALEQW-PIKGIILVPNCNNPLGFIMPDARKRAVLSLAQRHDIVIFEDDVYGELATEYPR 292 Query: 338 PSSLKSRDRNGNVIYCASLNKVLAPGMRLGWMNGGRWHERVKMLKFTHTRANEEWTQVTA 397 P ++ S D +G V+ C+S +K +APG+R+GW+ GR+H+++ +K+ + N TQ+ A Sbjct: 293 PRTIHSWDIDGRVLLCSSFSKSIAPGLRVGWVAPGRYHDKLMHMKYAISSFNVPSTQMAA 352 Query: 398 ADFIASPAYDRHLRRLRQMLKQQRERMAESIAAYFPEGTRLNLPNGGVGLWVELPVQVCS 457 A F+ Y RH+RR+RQ+ ++ I YFP + P GG LW+ELP QV Sbjct: 353 ATFVLEGHYHRHIRRMRQIYQRNLALYTCWIREYFPCEICITRPKGGFLLWIELPEQVDM 412 Query: 458 QQLFERALAEGVGVSPGAIFSNSSRYGHFVRICCGHPFNRELDQALRRLGGLVH 511 + + + V+ G+IFS S +Y + +RI C P + +AL+++G V+ Sbjct: 413 VCVTRQLCRMKIQVAAGSIFSASGKYRNCLRINCALPLSETYREALKQIGEAVY 466 >ECs5302 [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Ecs Escherichia coli O157:H7 Length = 470 Score = 287 bits (735), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 166/474 (35%), Positives = 261/474 (55%), Gaps = 16/474 (3%) Query: 43 YRRLADHYQSAIQAGTLVAGDRMPSVRDLMRQHQVSLSTALQTLRHMEEGGWLEARPRSG 102 Y+ LA I+ G G+++PSVR L ++H VS+ST Q + +E + +PRSG Sbjct: 4 YQHLATLLAERIEQGLYRHGEKLPSVRSLSQEHGVSISTVQQAYQTLETMKLITPQPRSG 63 Query: 103 YFVRQ-----PRRSAIRPVQEPKSLLAIDAGQFVGIHERVSKYIALRQAGAPHIDLSGMT 157 YFV Q P RPVQ P + D + + S + L ++ P ++ Sbjct: 64 YFVAQRKAQPPVPPMTRPVQRPVEITQWDLVLDMLVAHSDSSIVPLSKS-TPDVE----- 117 Query: 158 CAPQLYAVETLKQAAMRALRERPELLTSAMPHNGNATFRQAVARRALNAGMRIDTEEVVV 217 P L + L + R ++ + + G R+ VAR L++G + +++++ Sbjct: 118 -TPSL---KPLWRELSRVVQHNLQTVLGYDLLAGQRVLREQVARLMLDSGSVVTADDIII 173 Query: 218 THGCIEALNLALRAVAGPGDTIAVESPTYFGLLQALENLGMKALEIPTSPHTGISVEALE 277 T GC +++LAL AV PGD +AVESP Y+G +Q L +G+K +EIPT P TGISVEALE Sbjct: 174 TSGCHNSMSLALMAVCKPGDIVAVESPCYYGSMQMLRGMGVKVIEIPTDPETGISVEALE 233 Query: 278 LAVRTYGNIKAVVVVPNLQNPLGCIMPEDHKDQLVRLCDQLKLPLIEDDAYTELADGSVT 337 LA+ + IK +++VPN NPLG IMP+ K ++ L + + + EDD Y ELA Sbjct: 234 LALEQW-PIKGIILVPNCNNPLGFIMPDARKRAVLSLAQRHDIVIFEDDVYGELATEYPR 292 Query: 338 PSSLKSRDRNGNVIYCASLNKVLAPGMRLGWMNGGRWHERVKMLKFTHTRANEEWTQVTA 397 P ++ S D +G V+ C+S +K +APG+R+GW+ GR+H+++ +K+ + N TQ+ A Sbjct: 293 PRTIHSWDIDGRVLLCSSFSKSIAPGLRVGWVAPGRYHDKLMHMKYAISSFNVPSTQMAA 352 Query: 398 ADFIASPAYDRHLRRLRQMLKQQRERMAESIAAYFPEGTRLNLPNGGVGLWVELPVQVCS 457 A F+ Y RH+RR+RQ+ ++ I YFP + P GG LW+ELP QV Sbjct: 353 ATFVLEGHYHRHIRRMRQIYQRNLALYTCWIREYFPCEICITRPKGGFLLWIELPEQVDM 412 Query: 458 QQLFERALAEGVGVSPGAIFSNSSRYGHFVRICCGHPFNRELDQALRRLGGLVH 511 + + + V+ G+IFS S +Y + +RI C P + +AL+++G V+ Sbjct: 413 VCVTRQLCRMKIQVAAGSIFSASGKYRNCLRINCALPLSETYREALKQIGEAVY 466 >yjiR [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Eco Escherichia coli K12 Length = 470 Score = 287 bits (734), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 165/474 (34%), Positives = 262/474 (55%), Gaps = 16/474 (3%) Query: 43 YRRLADHYQSAIQAGTLVAGDRMPSVRDLMRQHQVSLSTALQTLRHMEEGGWLEARPRSG 102 Y+ LA I+ G G+++PSVR L ++H VS+ST Q + +E + +PRSG Sbjct: 4 YQHLATLLAERIEQGLYRHGEKLPSVRSLSQEHGVSISTVQQAYQTLETMKLITPQPRSG 63 Query: 103 YFVRQ-----PRRSAIRPVQEPKSLLAIDAGQFVGIHERVSKYIALRQAGAPHIDLSGMT 157 YFV Q P RPVQ P + D Q + + E + + + LS T Sbjct: 64 YFVAQRKAQPPVPPMTRPVQRPVEITQWD--QVLDMLEA--------HSDSSIVPLSKST 113 Query: 158 CAPQLYAVETLKQAAMRALRERPELLTSAMPHNGNATFRQAVARRALNAGMRIDTEEVVV 217 + +++ L + R ++ + + G R+ +AR L++G + +++++ Sbjct: 114 PDVEAPSLKPLWRELSRVVQHNLQTVLGYDLLAGQRVLREQIARLMLDSGSVVTADDIII 173 Query: 218 THGCIEALNLALRAVAGPGDTIAVESPTYFGLLQALENLGMKALEIPTSPHTGISVEALE 277 T GC +++LAL AV PGD +AVESP Y+G +Q L +G+K +EIPT P TGISVEALE Sbjct: 174 TSGCHNSMSLALMAVCKPGDIVAVESPCYYGSMQMLRGMGVKVIEIPTDPETGISVEALE 233 Query: 278 LAVRTYGNIKAVVVVPNLQNPLGCIMPEDHKDQLVRLCDQLKLPLIEDDAYTELADGSVT 337 LA+ + IK +++VPN NPLG IMP+ K ++ L + + + EDD Y ELA Sbjct: 234 LALEQW-PIKGIILVPNCNNPLGFIMPDARKRAVLSLAQRHDIVIFEDDVYGELATEYPR 292 Query: 338 PSSLKSRDRNGNVIYCASLNKVLAPGMRLGWMNGGRWHERVKMLKFTHTRANEEWTQVTA 397 P ++ S D +G V+ C+S +K +APG+R+GW+ GR+H+++ +K+ + N TQ+ A Sbjct: 293 PRTIHSWDIDGRVLLCSSFSKSIAPGLRVGWVAPGRYHDKLMHMKYAISSFNVPSTQMAA 352 Query: 398 ADFIASPAYDRHLRRLRQMLKQQRERMAESIAAYFPEGTRLNLPNGGVGLWVELPVQVCS 457 A F+ Y RH+RR+RQ+ ++ I YFP + P GG LW+ELP QV Sbjct: 353 ATFVLEGHYHRHIRRMRQIYQRNLALYTCWIREYFPCEICITRPKGGFLLWIELPEQVDM 412 Query: 458 QQLFERALAEGVGVSPGAIFSNSSRYGHFVRICCGHPFNRELDQALRRLGGLVH 511 + + + V+ G+IFS S +Y + +RI C P + +AL+++G V+ Sbjct: 413 VCVARQLCRMKIQVAAGSIFSASGKYRNCLRINCALPLSETYREALKQIGEAVY 466 >ydcR [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Eco Escherichia coli K12 Length = 468 Score = 274 bits (701), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 155/472 (32%), Positives = 265/472 (56%), Gaps = 11/472 (2%) Query: 43 YRRLADHYQSAIQAGTLVAGDRMPSVRDLMRQHQVSLSTALQTLRHMEEGGWLEARPRSG 102 Y++LA+ + I +G GDR+PS+RD + +S T + +E G++ ARP+SG Sbjct: 4 YQQLAEQLREQIASGIWQPGDRLPSLRDQVALSGMSFMTVSHAYQLLESQGYIIARPQSG 63 Query: 103 YFVRQPRRSAIRPVQEPKS-LLAIDAGQFVGIHERVSKYIALRQAGAPHI-DLSGMTCAP 160 Y+V A + ++ PK+ ++ + + V I+ + + L+ + P + + P Sbjct: 64 YYV------APQAIKMPKAPVIPVTRDEAVDINTYI--FDMLQASRDPSVVPFASAFPDP 115 Query: 161 QLYAVETLKQAAMRALRERPELLTSAMPHNGNATFRQAVARRALNAGMRIDTEEVVVTHG 220 +L+ ++ L ++ + + + GNA RQA+ARR G+ I +E+V+T G Sbjct: 116 RLFPLQQLNRSLAQVSKTATAMSVIENLPPGNAELRQAIARRYALQGITISPDEIVITAG 175 Query: 221 CIEALNLALRAVAGPGDTIAVESPTYFGLLQALENLGMKALEIPTSPHTGISVEALELAV 280 +EALNL+L+AV PGD + VE+P ++G LQALE L +KAL + T GI ++ALELA+ Sbjct: 176 ALEALNLSLQAVTEPGDWVIVENPCFYGALQALERLRLKALSVATDVKEGIDLQALELAL 235 Query: 281 RTYGNIKAVVVVPNLQNPLGCIMPEDHKDQLVRLCDQLKLPLIEDDAYTELADGSVTPSS 340 + Y +KA ++ N QNPLG + K QLV L +Q + LIEDD Y+EL G P Sbjct: 236 QEYP-VKACWLMTNSQNPLGFTLTPQKKAQLVALLNQYNVTLIEDDVYSELYFGREKPLP 294 Query: 341 LKSRDRNGNVIYCASLNKVLAPGMRLGWMNGGRWHERVKMLKFTHTRANEEWTQVTAADF 400 K+ DR+ V++C+S +K L PG R+GW+ G+ +++ L+ T + Q+ D+ Sbjct: 295 AKAWDRHDGVLHCSSFSKCLVPGFRIGWVAAGKHARKIQRLQLMSTLSTSSPMQLALVDY 354 Query: 401 IASPAYDRHLRRLRQMLKQQRERMAESIAAYFPEGTRLNLPNGGVGLWVELPVQVCSQQL 460 +++ YD HLRRLR+ L ++++R +++ Y P +++ + G LW+ELP + + +L Sbjct: 355 LSTRRYDAHLRRLRRQLAERKQRAWQALLRYLPAEVKIHHNDSGYFLWLELPEPLDAGEL 414 Query: 461 FERALAEGVGVSPGAIFSNSSRYGHFVRICCGHPFNRELDQALRRLGGLVHH 512 AL + ++PG +FS + F R + +QA+++LG L+ Sbjct: 415 SLAALTHHISIAPGKMFSTGENWSRFFRFNTAWQWGEREEQAVKQLGKLIQE 466