BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0297.p (502 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGl3214_1 [T] COG2202 FOG Atu Agrobacterium tumefaciens strain C... 384 e-106 AGl3214_2 [T] COG2199 FOG Atu Agrobacterium tumefaciens strain C... 209 1e-53 slr0829_3 [T] COG2199 FOG Syn Synechocystis 94 1e-18 DR0267 [T] COG2199 FOG Dra Deinococcus radiodurans 91 4e-18 SMa2301 [T] COG2199 FOG Sme Sinorhizobium meliloti 89 3e-17 PA0290_2 [T] COG2199 FOG Pae Pseudomonas aeruginosa 88 4e-17 aq_429 [T] COG2199 FOG Aae Aquifex aeolicus 88 4e-17 aq_035_2 [T] COG2199 FOG Aae Aquifex aeolicus 88 6e-17 DR2498 [T] COG2199 FOG Dra Deinococcus radiodurans 87 1e-16 PA3177 [T] COG2199 FOG Pae Pseudomonas aeruginosa 86 1e-16 >AGl3214_1 [T] COG2202 FOG Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 336 Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust. Identities = 178/304 (58%), Positives = 231/304 (75%) Query: 26 TFDLTPVSLWKEDYSGLKRLFDQWRAAGVTDLRSYLRQDHARAHACAMQIRVVDVNRRTL 85 F+L PV++W ED+S +K FD WRA G+ D+R++L +D +R AC+ +IRV++VN +TL Sbjct: 33 VFNLAPVAMWIEDFSEVKSQFDIWRAEGIEDIRAFLLEDLSRVAACSQKIRVIEVNAKTL 92 Query: 86 EWYEARDLEHLVANLDKVFRDDMLETFIDEMAQLWEGRSHFSSYTVNYTLGGKRLDIQLS 145 E +EARD HLV NL ++FRDDMLE+ ++E+++LW GR+ F+S VNY++GG+RLDIQL Sbjct: 93 ELFEARDQAHLVDNLHRIFRDDMLESHVNELSELWAGRTEFTSNAVNYSIGGRRLDIQLR 152 Query: 146 GRIMPGSEESWEYVLLAIENVTERETARKKLSRSENYARGLFEYSPISLWVEDFSQVKRL 205 G ++PG E++ +LL E+VTERE AR+K + YA G+F++SP+SLWVEDFS+V+RL Sbjct: 153 GTVIPGHEDTLGRLLLTTEDVTEREEARRKELLNRRYAEGMFKHSPVSLWVEDFSRVRRL 212 Query: 206 FNDLHRIGITDFRTFTDVHPEFVERCMQEIRVIDVNLQTLSMFCAPDKATLLSRLSDVFR 265 ++ GI DFR F DVHPEFV +CM EIRVIDVN TL +FCA D+ LL RL D+FR Sbjct: 213 IEEVRERGIVDFRVFMDVHPEFVRQCMSEIRVIDVNQATLDLFCAADRQVLLQRLGDIFR 272 Query: 266 DDMRQHFNEQLIELWNGNLLHQREVVNYALNGETLHVHLQFSVFPGHEEHWDLVLVALTD 325 +M + F EQLIELWNGNL H REVVNYAL+G HV L FSVFPGHE W LV VALTD Sbjct: 273 GEMEKPFREQLIELWNGNLTHHREVVNYALDGSERHVLLHFSVFPGHERDWSLVQVALTD 332 Query: 326 ITAR 329 ITAR Sbjct: 333 ITAR 336 Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/216 (33%), Positives = 112/216 (51%), Gaps = 23/216 (10%) Query: 174 KKLSRSENYARGLFEYSPISLWVEDFSQVKRLFNDLHRIGITDFRTFTDVHPEFVERCMQ 233 K +E +F +P+++W+EDFS+VK F+ GI D R F V C Q Sbjct: 21 KNARMTETIDTNVFNLAPVAMWIEDFSEVKSQFDIWRAEGIEDIRAFLLEDLSRVAACSQ 80 Query: 234 EIRVIDVNLQTLSMFCAPDKATLLSRLSDVFRDDMRQHFNEQLIELWNGNLLHQREVVNY 293 +IRVI+VN +TL +F A D+A L+ L +FRDDM + +L ELW G VNY Sbjct: 81 KIRVIEVNAKTLELFEARDQAHLVDNLHRIFRDDMLESHVNELSELWAGRTEFTSNAVNY 140 Query: 294 ALNGETLHVHLQFSVFPGHEEHWDLVLVALTDITARKKAEAYLEFLGKHDELTKLHNRAY 353 ++ G L + L+ +V PGHE+ +L+ D+T R++A + EL Sbjct: 141 SIGGRRLDIQLRGTVIPGHEDTLGRLLLTTEDVTEREEA--------RRKEL-------- 184 Query: 354 MVDELNRLERKGPF---PVSVIVADLNGLKQVNDEL 386 LNR +G F PVS+ V D + ++++ +E+ Sbjct: 185 ----LNRRYAEGMFKHSPVSLWVEDFSRVRRLIEEV 216 >AGl3214_2 [T] COG2199 FOG Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 189 Score = 209 bits (533), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 103/161 (63%), Positives = 121/161 (75%) Query: 330 KKAEAYLEFLGKHDELTKLHNRAYMVDELNRLERKGPFPVSVIVADLNGLKQVNDELGHA 389 KKAEAYLE+LGKHD LTKLHNRA+ DELNRLER PVS IV DLNGLK+ ND+LGH Sbjct: 1 KKAEAYLEYLGKHDVLTKLHNRAFYSDELNRLERSALRPVSAIVIDLNGLKEANDKLGHD 60 Query: 390 AGDALLRRVGEVLDKAVERPCSVARTGGDEFAILLPATDERGCVLLMEQVQKLLEVNNQY 449 AGDALLRRVGEVL+ V P AR GGDEFAILLP D++ +++ V +LL++NNQ+ Sbjct: 61 AGDALLRRVGEVLNGVVTAPNHAARIGGDEFAILLPGADKQVAAAMVDTVYELLKINNQF 120 Query: 450 YSGVPLSLSMGAATALPGERLEQVVQRADSLMYEAKRQYYA 490 YS PLSLS+G AT GE +E +V+RAD MYE K YYA Sbjct: 121 YSSAPLSLSLGVATTEAGETMESLVRRADMNMYEQKNAYYA 161 >slr0829_3 [T] COG2199 FOG Syn Synechocystis Length = 188 Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/169 (36%), Positives = 90/169 (53%), Gaps = 16/169 (9%) Query: 343 DELTKLHNR----AYMVDELNRLERKGPFPVSVIVADLNGLKQVNDELGHAAGDALLRRV 398 D LTK+ NR + E RL R P+S+I+ D++ K ND GH GD L RV Sbjct: 15 DGLTKIANRRCFNVRIKQEWRRLSR-AQVPISLIMFDIDCFKNYNDRYGHPEGDLCLIRV 73 Query: 399 GEVLDKAVERPCS-VARTGGDEFAILLPATDERGCVLLMEQVQKLLEVNNQYYSGVPLS- 456 + KA RP VAR GG+EFA+LLP TD +G +++ E++ + + + P+S Sbjct: 74 AQAARKAASRPADLVARFGGEEFAVLLPETDTKGAIMVAEKIIQAISQLAIAHEASPISG 133 Query: 457 ---LSMGAATALPGERL--EQVVQRADSLMYEAKR----QYYATSPTLE 496 +S+G T P + L ++++AD +YEAKR QY + LE Sbjct: 134 QITISLGIGTQFPSKELISRTLIKQADMALYEAKRRGRNQYVVWTEELE 182 >DR0267 [T] COG2199 FOG Dra Deinococcus radiodurans Length = 511 Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 70/163 (42%), Positives = 87/163 (53%), Gaps = 7/163 (4%) Query: 328 ARKKAEAYLEFLGKHDELTKLHNRAYMVDELNR-LERKGPFPVSVIVADLNGLKQVNDEL 386 AR+ E L L HD LT LHNRA DEL R L P P++++ DLN K VND L Sbjct: 340 ARQAQE--LHHLAFHDALTGLHNRAAFEDELQRQLHVPRPQPLALLYLDLNNFKPVNDTL 397 Query: 387 GHAAGDALLRRVGEVLDKAVERPCSVARTGGDEFAILLPAT-DERGCVLLMEQVQKLLEV 445 GHAAGD L +V + L A+ VAR GGDEFA+LL + DE EQ++ LE Sbjct: 398 GHAAGDQALAQVAQRLQAALPAGTFVARLGGDEFAVLLTSIPDEDAAWAAEEQIRAALER 457 Query: 446 NNQYYSGVP-LSLSMGAATALPGERL--EQVVQRADSLMYEAK 485 Q V LS ++G A GE + E + + AD MY K Sbjct: 458 PMQLGEHVVHLSAAVGVTLAPAGEAVVPEILWREADQAMYRVK 500 >SMa2301 [T] COG2199 FOG Sme Sinorhizobium meliloti Length = 448 Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 93/166 (56%), Gaps = 11/166 (6%) Query: 332 AEAYLEFLGKHDELTKLHNRAYMVDELNRLERKGP---FPVSVIVADLNGLKQVNDELGH 388 A A LE L K D LT + NR +M++ LNRL G ++++ D++ K +ND LGH Sbjct: 267 ANARLERLAKTDPLTGIANRRWMMETLNRLWSSGAERRPGTAMLMCDIDDFKSLNDRLGH 326 Query: 389 AAGDALLRRVGEVLDKAVERPCS-VARTGGDEFAILLPATDERGCVLLMEQVQKLLE--- 444 A GD L +V ++ +V R VAR GG+EF ++LP +E V E+++ +E Sbjct: 327 AEGDRCLVKVAGIIQSSVRRNRDHVARYGGEEFLVVLPGANEEAAVATAERIRASVEAAS 386 Query: 445 VNNQYYSGVP-LSLSMGAATALPGERL---EQVVQRADSLMYEAKR 486 + N P ++LS+G A PGE + E++ +AD+ +Y AK+ Sbjct: 387 LPNPASRVAPYVTLSIGVAAQAPGEEIVAPEKLQNQADAALYLAKQ 432 >PA0290_2 [T] COG2199 FOG Pae Pseudomonas aeruginosa Length = 184 Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 10/178 (5%) Query: 318 LVLVALTDITARKKAEAYLEFLGKHDELTKLHNRAYMVDE----LNRLERKGPFPVSVIV 373 +V+ DIT +K E+ L+ L D LT+ NR Y D R+G P++ ++ Sbjct: 1 MVVGIAEDITDKKHMESELQRLATTDVLTQSSNRRYFFDSAEAAFKECRREG-IPLAFLL 59 Query: 374 ADLNGLKQVNDELGHAAGDALLRRVGEVLDKAVERPCSVARTGGDEFAILLPATDERGCV 433 D++ K++ND GH GD +L+R+ + A+ R R GG+EFA+LLP DE+ Sbjct: 60 LDVDDFKKINDRFGHQVGDQVLQRIAQSGSAALRRGDLFGRIGGEEFAVLLPGCDEQTAR 119 Query: 434 LLME----QVQKLLEVNNQYYSGVPLSLSMGAATALPGERLEQVVQRADSLMYEAKRQ 487 + E +VQ+L ++ G+ +S + A E L + RAD+ MY AKRQ Sbjct: 120 QIGERLQREVQRLRFQEGEHSFGITVSQGLTVLQA-DDEGLGALYSRADAAMYSAKRQ 176 >aq_429 [T] COG2199 FOG Aae Aquifex aeolicus Length = 246 Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 55/152 (36%), Positives = 92/152 (60%), Gaps = 14/152 (9%) Query: 343 DELTKLHNRAYMVDELNRLERKG--PF--PVSVIVADLNGLKQVNDELGHAAGDALLRRV 398 D LT ++NR ++ +E+ +LE++ F +I DL+ K+VND GH GD +L+RV Sbjct: 92 DSLTGVYNRKFL-EEIFKLEKEKYRTFRKEFCIIFIDLDNFKEVNDRYGHMEGDKVLKRV 150 Query: 399 GEVLDKAVERPCSVARTGGDEFAILLPATDERGCVL-LMEQVQKLLEVNNQYYSGVPLSL 457 E++ K+V + V R GGDEF I+ A RG VL +M ++Q ++++ Y V ++ Sbjct: 151 AELIKKSVRKEDYVIRYGGDEFVIITEAP--RGDVLSIMSRLQDVIKIK---YKEVEVTA 205 Query: 458 SMGAATALP--GERLEQVVQRADSLMYEAKRQ 487 S+G+A P G+ LE+++++AD MY K+ Sbjct: 206 SIGSA-CFPNDGKELEELIKKADERMYRIKKM 236 >aq_035_2 [T] COG2199 FOG Aae Aquifex aeolicus Length = 251 Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 52/164 (31%), Positives = 94/164 (57%), Gaps = 8/164 (4%) Query: 331 KAEAYLEFLGKHDELTKLHNRAYMVD----ELNRLERKGPFPVSVIVADLNGLKQVNDEL 386 K + E + D LT L+NR + EL + +R G + S+++ D++ K++ND Sbjct: 75 KEKTLYERMALTDPLTGLYNRRVFTEMAEKELAKAKRYG-YNFSILMIDIDNFKKINDTY 133 Query: 387 GHAAGDALLRRVGEVLDKAVERPCSVARTGGDEFAILLPATDERGCVLLMEQVQKLLE-- 444 GH GD +L+++ E+L + V VAR GG+EF ++L T+ G V EQ+++++E Sbjct: 134 GHDVGDLVLKKISEILKRNVRGADLVARFGGEEFIVMLSNTNLNGAVKKAEQLRRMIEQT 193 Query: 445 -VNNQYYSGVPLSLSMGAATALPGERLEQVVQRADSLMYEAKRQ 487 + + +++S+G +T E LE++++ AD +YEAKR+ Sbjct: 194 PIELPNGEKLRVTVSIGVSTYRGHESLEELIKEADQALYEAKRK 237 >DR2498 [T] COG2199 FOG Dra Deinococcus radiodurans Length = 356 Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/146 (36%), Positives = 81/146 (55%), Gaps = 5/146 (3%) Query: 343 DELTKLHNRAYMVDELNR---LERKGPFPVSVIVADLNGLKQVNDELGHAAGDALLRRVG 399 D LT + RA + EL R R+ P+SVI+AD++ KQVND GH AGD +LR Sbjct: 205 DALTGVAGRAALESELQRALDTARRTNSPLSVILADIDHFKQVNDVHGHGAGDDVLRAFA 264 Query: 400 EVLDKAVERPCSVARTGGDEFAILLPATDERGCVLLMEQVQKLLEVNNQYYSGVPLSLSM 459 + L + V V R GG+EF +LP + L E++++ V++ +G+P++ S Sbjct: 265 KRLRRNVGGAGMVGRWGGEEFMAVLPGVARDDALALAERLRQ--AVSDTEIAGLPVTASF 322 Query: 460 GAATALPGERLEQVVQRADSLMYEAK 485 G A P + L Q+ RAD +Y+AK Sbjct: 323 GVAALRPDDDLNQLFSRADERLYDAK 348 >PA3177 [T] COG2199 FOG Pae Pseudomonas aeruginosa Length = 307 Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 85/149 (57%), Gaps = 5/149 (3%) Query: 343 DELTKLHNRAYMVDELNR---LERKGPFPVSVIVADLNGLKQVNDELGHAAGDALLRRVG 399 D LT NR M L R L R+ P+SV++ D++ K+VND GHA GD L+ V Sbjct: 150 DALTGTGNRIAMDQALGRELELARRNLQPLSVLMLDIDHFKRVNDHYGHAVGDEALKAVA 209 Query: 400 EVLDKAVERPCSVARTGGDEFAILLPATDERGCVLLMEQVQKLLEVNNQYYSGVP--LSL 457 E + + V R GG+EF +LL +T + ++ E++++ +E + ++G P LS+ Sbjct: 210 ETIKDHLRNVDMVFRFGGEEFLVLLSSTPLQAACMVGERLRQAVEELDYRHAGEPLKLSI 269 Query: 458 SMGAATALPGERLEQVVQRADSLMYEAKR 486 S+G A PGE + +++R D +YEAKR Sbjct: 270 SLGCADLRPGEGSDDLLRRVDEALYEAKR 298