BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0281.p         (290 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2080 Non COG                                                        81   4e-15

>RSc2080 Non COG
          Length = 283

 Score = 80.9 bits (198), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 95/194 (48%), Gaps = 26/194 (13%)

Query: 1   MRKTTGTSVKAPARL-SRIALALAVLAGGLSCAWTVAQNAPAEPAAPTAAAAAPAAAPAP 59
           +++T G + +    L  R+A A    A G+  +   AQ        P A++ +  A  A 
Sbjct: 4   IQRTPGQAPRGDRTLRRRLAGAAFACAAGIVASVAAAQ-------VPAASSPSATAPAAA 56

Query: 60  APATSATPAAPVTPPAAAAAHPPAKSGVKSTARKSDNQLAWTNLSAAQRQALEPLTTEWP 119
           A   +  PAAP T P   + HP                  W+ LS  Q++ L PL  EW 
Sbjct: 57  ASMPAFVPAAPATNP-QPSLHP-----------------NWSELSILQQRILAPLAPEWN 98

Query: 120 RMSELQKEKWLEIGKRYARMKPEEQQRLHERMRDWVKLTPAERSAARTNYARAKKLDAEE 179
            M EL ++KWL+I + Y +  P +QQRL  RM DW KLTP +R  AR NY  +K L  ++
Sbjct: 99  GMPELARKKWLQIAQAYPKYTPAQQQRLQTRMVDWAKLTPEQRHRARENYQTSKSLPVQK 158

Query: 180 KHEQWAKYQQLSEE 193
           K E W  YQQL EE
Sbjct: 159 KSEAWQNYQQLPEE 172