BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0277.p (281 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1134 [S] COG2833 Uncharacterized protein conserved in bacteri... 284 2e-76 NMB0621 [S] COG2833 Uncharacterized protein conserved in bacteri... 247 2e-65 NMA0829 [S] COG2833 Uncharacterized protein conserved in bacteri... 246 3e-65 HI0077 [S] COG2833 Uncharacterized protein conserved in bacteria... 238 1e-62 PM0569 [S] COG2833 Uncharacterized protein conserved in bacteria... 234 2e-61 AGc3363 [S] COG2833 Uncharacterized protein conserved in bacteri... 221 1e-57 BMEI1050 Non COG 206 4e-53 Cj1113 [S] COG2833 Uncharacterized protein conserved in bacteria... 160 4e-39 SMc00523 [S] COG2833 Uncharacterized protein conserved in bacter... 125 9e-29 SMc00540 [S] COG2833 Uncharacterized protein conserved in bacter... 77 6e-14 >RSc1134 [S] COG2833 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 268 Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 155/259 (59%), Positives = 187/259 (72%), Gaps = 1/259 (0%) Query: 16 LRSGALSCLRETRPAAKCSAVRALRAAWQQGRLPLETEDLAVTEPGSGIPGRPERPELVS 75 LR AL+ L T PA K A L + D + P +GIPGRP P LV Sbjct: 3 LRHEALAALCLTDPADKADATLRLGERARTADDSAWLADAPIVAPAAGIPGRPAAPVLVP 62 Query: 76 PLQV-KHRSMGTPEGRAALIHALAHIEFNAINLALDAVWRFAGMPRDFYADWLQVADEEA 134 P +V + R++ TP GRA L+HALAHIEFNAINLALDAVWRFAGMP FY DW++VA EEA Sbjct: 63 PSEVPRRRAIDTPHGRAVLLHALAHIEFNAINLALDAVWRFAGMPVAFYRDWMRVAAEEA 122 Query: 135 YHFSLLADHLSTLGHAYGDFTAHNALWDMAESTKGDVLARIALVPRTLEARGLDAAPPVR 194 HFSLL+ HL+TL YGD AH+ LW M E T D LAR+ALVPRTLEARGLDA+PP+R Sbjct: 123 THFSLLSAHLATLDCRYGDHPAHDGLWQMTEKTAADPLARMALVPRTLEARGLDASPPIR 182 Query: 195 AKLAQAGDLAAAEILDIIMRDEVGHVLIGNRWFNWLCEQRQLDPVATFAQLCQRHKAPPL 254 AKLA AGD+AAA ILDII+RDE+GHV +GNRW+ WLC + LDP+ T+ +L +++ AP L Sbjct: 183 AKLAAAGDMAAAGILDIILRDEIGHVAVGNRWYRWLCGRAGLDPLPTYRRLAEQYGAPRL 242 Query: 255 RGPFNLEARRAAGFSDEEM 273 RGPFNL+ARR AGF D+E+ Sbjct: 243 RGPFNLDARRQAGFDDDEI 261 >NMB0621 [S] COG2833 Uncharacterized protein conserved in bacteria Nme Neisseria meningitidis MC58 Length = 275 Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 122/216 (56%), Positives = 146/216 (67%) Query: 66 GRPERPELVSPLQVKHRSMGTPEGRAALIHALAHIEFNAINLALDAVWRFAGMPRDFYAD 125 GRP++P LV+P Q+ R M T EG AA++HA+AHIEFNAINLALDA +RF +P F D Sbjct: 51 GRPDKPVLVAPSQLTPRKMNTTEGYAAMLHAIAHIEFNAINLALDAAYRFRTLPFQFVRD 110 Query: 126 WLQVADEEAYHFSLLADHLSTLGHAYGDFTAHNALWDMAESTKGDVLARIALVPRTLEAR 185 W++VA EE YHF L+ + L G YGDF AHN LWDMA T D L R+ALVPR LEAR Sbjct: 111 WVKVAKEEVYHFRLMRERLRAFGFDYGDFEAHNHLWDMAYKTAYDPLLRMALVPRVLEAR 170 Query: 186 GLDAAPPVRAKLAQAGDLAAAEILDIIMRDEVGHVLIGNRWFNWLCEQRQLDPVATFAQL 245 GLD P +RAK+AQ GD +LDII RDEVGHV IGNRW+ LC +R L+PVA F L Sbjct: 171 GLDVTPGIRAKVAQRGDSETCGVLDIIYRDEVGHVAIGNRWYQHLCRERGLEPVALFRSL 230 Query: 246 CQRHKAPPLRGPFNLEARRAAGFSDEEMLMFTDISR 281 R+ RG N+EAR AGFS E+ M D + Sbjct: 231 IARYDMFIFRGYVNIEAREKAGFSRFELDMLEDFEQ 266 >NMA0829 [S] COG2833 Uncharacterized protein conserved in bacteria NmA Neisseria meningitidis Z2491 Length = 275 Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 120/216 (55%), Positives = 146/216 (67%) Query: 66 GRPERPELVSPLQVKHRSMGTPEGRAALIHALAHIEFNAINLALDAVWRFAGMPRDFYAD 125 GRP++P LV+P Q+ R M T EG AA++HA+AHIEFNA+NLALDA +RF +P F D Sbjct: 51 GRPDKPVLVAPSQLTPRKMNTTEGYAAMLHAIAHIEFNAVNLALDAAYRFRTLPFQFVRD 110 Query: 126 WLQVADEEAYHFSLLADHLSTLGHAYGDFTAHNALWDMAESTKGDVLARIALVPRTLEAR 185 W++VA EE YHF L+ + L G YGDF AHN LWDMA T D L R+ALVPR LEAR Sbjct: 111 WVKVAKEEVYHFRLMRERLRAFGFDYGDFEAHNHLWDMAYKTAYDPLLRMALVPRVLEAR 170 Query: 186 GLDAAPPVRAKLAQAGDLAAAEILDIIMRDEVGHVLIGNRWFNWLCEQRQLDPVATFAQL 245 GLD P +RAK+AQ GD +LDII RDEVGHV IGNRW+ LC +R L+P+A F L Sbjct: 171 GLDVTPGIRAKVAQRGDSETCGVLDIIYRDEVGHVAIGNRWYQHLCRERGLEPIALFRSL 230 Query: 246 CQRHKAPPLRGPFNLEARRAAGFSDEEMLMFTDISR 281 R+ RG N+EAR AGFS E+ M D + Sbjct: 231 IARYDMFIFRGYVNIEAREKAGFSRFELDMLEDFEQ 266 >HI0077 [S] COG2833 Uncharacterized protein conserved in bacteria Hin Haemophilus influenzae Length = 288 Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 121/259 (46%), Positives = 159/259 (61%), Gaps = 7/259 (2%) Query: 22 SCLRETRPAAKCSAVRALRAAWQQGRLPLETEDLAVTEPGSGIPGRPERPELVSPLQVKH 81 + L+ P KC V L ++ ED P I PE+P LV+P V Sbjct: 14 TALKTANPQEKCRLVNDLYDNLLPQIQLIKLEDFPEIVPQDNIAAFPEKPLLVAPKDVPK 73 Query: 82 RSMGTPEGRAALIHALAHIEFNAINLALDAVWRFAGMPRD-------FYADWLQVADEEA 134 RS T EG AA +HA+AHIEFNAINL LDA WRF ++ F DWL+VA EE+ Sbjct: 74 RSFATEEGYAATLHAIAHIEFNAINLGLDAAWRFGRNAQEELGEGLAFVKDWLRVAREES 133 Query: 135 YHFSLLADHLSTLGHAYGDFTAHNALWDMAESTKGDVLARIALVPRTLEARGLDAAPPVR 194 HFSL+ +HL TLG+ YGDF AH LW+MA++T D+ R+ALVPR LEARGLDA P ++ Sbjct: 134 THFSLVNEHLKTLGYQYGDFEAHAGLWEMAQATAHDIWERMALVPRVLEARGLDATPVLQ 193 Query: 195 AKLAQAGDLAAAEILDIIMRDEVGHVLIGNRWFNWLCEQRQLDPVATFAQLCQRHKAPPL 254 K+AQ D AA ILDII+RDE+GHV IGN W++ L ++R LD + F +L +++ Sbjct: 194 EKIAQRKDFAAVNILDIILRDEIGHVYIGNHWYHALSKKRGLDAMKCFTELLHKYRIVIF 253 Query: 255 RGPFNLEARRAAGFSDEEM 273 +G N +AR AGF+ E+ Sbjct: 254 KGVINTDARIQAGFTQHEL 272 >PM0569 [S] COG2833 Uncharacterized protein conserved in bacteria Pmu Pasteurella multocida Length = 287 Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 125/276 (45%), Positives = 162/276 (58%), Gaps = 7/276 (2%) Query: 13 FTGLRSGALSCLRETRPAAKCSAVRALRAAWQQGRLPLETEDLAVTEPGSGIPGRPERPE 72 T L L ETRP KC+ V L D I G P RP Sbjct: 1 MTALWHAITEALTETRPEEKCALVNHLYDELLPQVQFSCISDFPEVNATQDIAGFPTRPL 60 Query: 73 LVSPLQVKHRSMGTPEGRAALIHALAHIEFNAINLALDAVWRFAGMPRD-------FYAD 125 V+P V R+ T EG AA +HA+AHIEFNAINL LDA WRF + F D Sbjct: 61 CVAPKDVPKRAFATEEGYAATLHAIAHIEFNAINLGLDAAWRFGRCAQQELNQGMAFVKD 120 Query: 126 WLQVADEEAYHFSLLADHLSTLGHAYGDFTAHNALWDMAESTKGDVLARIALVPRTLEAR 185 WL+VA EE+ HFSLL HL +LG+ YGDF AH LW+MA++T D+ R+ALVPR LEAR Sbjct: 121 WLRVAREESTHFSLLNQHLKSLGYQYGDFEAHAGLWEMAQATAHDIWERMALVPRVLEAR 180 Query: 186 GLDAAPPVRAKLAQAGDLAAAEILDIIMRDEVGHVLIGNRWFNWLCEQRQLDPVATFAQL 245 GLDA P ++ K+ Q D AA EILD+I+RDE+GHV IGN W++ L E+R LD + +FA+L Sbjct: 181 GLDATPVLQDKIRQRKDFAAVEILDVILRDEIGHVGIGNHWYHALSEKRGLDAMQSFAEL 240 Query: 246 CQRHKAPPLRGPFNLEARRAAGFSDEEMLMFTDISR 281 ++++ +G N +AR AGF+ E+ +I + Sbjct: 241 LRKYRIVIFKGVINTDARLQAGFTQYELDWIYEIEQ 276 >AGc3363 [S] COG2833 Uncharacterized protein conserved in bacteria Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 275 Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 120/271 (44%), Positives = 161/271 (59%), Gaps = 5/271 (1%) Query: 12 SFTGLRSGALSCLRETRPAAKCSAVRALRAAWQQGRLPLETEDLAVTEPGSGIPGRPERP 71 LR GA + K + W + RL L + + P PGRPE+P Sbjct: 6 KIISLRGGATEAIVSADLDRKTELAQETATRWFERRLSLRS---PLDPPLPERPGRPEKP 62 Query: 72 ELVSPLQVKHRSMGTPEGRAALIHALAHIEFNAINLALDAVWRFAG--MPRDFYADWLQV 129 ELV P V+ RS+ + +GR AL+HA+AHIE NA++LALD V R+A +P F+ W+QV Sbjct: 63 ELVPPTAVERRSLHSVKGRIALLHAIAHIELNAVDLALDIVARYASEPVPHSFFDGWMQV 122 Query: 130 ADEEAYHFSLLADHLSTLGHAYGDFTAHNALWDMAESTKGDVLARIALVPRTLEARGLDA 189 A EEA HF L+ D L +LG YGD AH+ LW A ST+ D+ AR+A+VP LEARGLD Sbjct: 123 AFEEAKHFRLVRDRLVSLGADYGDLPAHDGLWQAAHSTRNDLTARLAVVPLILEARGLDV 182 Query: 190 APPVRAKLAQAGDLAAAEILDIIMRDEVGHVLIGNRWFNWLCEQRQLDPVATFAQLCQRH 249 P ++AK+ + GDL +A +LD+I DE GHV IG +WF +LC + + DP ATF QL + + Sbjct: 183 TPSLQAKMRETGDLESAAVLDVIYNDEKGHVAIGAKWFRFLCAREKKDPAATFRQLVRSN 242 Query: 250 KAPPLRGPFNLEARRAAGFSDEEMLMFTDIS 280 PL+ PFN AR AG + T +S Sbjct: 243 FRGPLKPPFNDLARAEAGLTPSFYRSLTSVS 273 >BMEI1050 Non COG Length = 275 Score = 206 bits (525), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 104/207 (50%), Positives = 137/207 (66%), Gaps = 2/207 (0%) Query: 65 PGRPERPELVSPLQVKHRSMGTPEGRAALIHALAHIEFNAINLALDAVWRFA--GMPRDF 122 PGRPE+PELV P +K RS+ T GR AL+HALAHIE NAI+LALD V RFA +PR F Sbjct: 57 PGRPEKPELVPPRMLKKRSLNTEHGRIALMHALAHIELNAIDLALDIVARFAVKPIPRSF 116 Query: 123 YADWLQVADEEAYHFSLLADHLSTLGHAYGDFTAHNALWDMAESTKGDVLARIALVPRTL 182 + W++VAD+EA HF+LL + L +LG YGD AH+ LW A T+ D+ AR+A+VP L Sbjct: 117 FDGWMKVADDEARHFTLLRNRLKSLGADYGDMPAHDGLWQSAHQTRNDLEARLAVVPLIL 176 Query: 183 EARGLDAAPPVRAKLAQAGDLAAAEILDIIMRDEVGHVLIGNRWFNWLCEQRQLDPVATF 242 EARGLD P + K+ + GD A IL+II DE HV +G +WF + C + ++DP A F Sbjct: 177 EARGLDVTPSLLEKMIETGDHETAAILNIIYNDEKTHVAVGAKWFRFFCARNRIDPAARF 236 Query: 243 AQLCQRHKAPPLRGPFNLEARRAAGFS 269 +L + + L+ PFN AR AG + Sbjct: 237 RELVRANFRGELKPPFNELARAEAGLT 263 >Cj1113 [S] COG2833 Uncharacterized protein conserved in bacteria Cje Campylobacter jejuni Length = 265 Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 90/255 (35%), Positives = 134/255 (52%), Gaps = 15/255 (5%) Query: 23 CLRETRPAAKCSAVRALRAAWQQGRLPLETEDLAVTEPGSGIPGRPERPELVSPLQVKH- 81 L E K + + ++ + E ++ + + ++ L P +++ Sbjct: 12 ILYEKNITIKFHSFQNFYEDFKSHKFIFNHEHQSIFKKNTS-----QQITLFHPTRIRRP 66 Query: 82 RSMGTPEGRAALIHALAHIEFNAINLALDAVWRFAGMPRDFYADWLQVADEEAYHFSLLA 141 + + + A +IH++AHIEFNAINLALDA +RF +P FY DWL+VADEE HF LL Sbjct: 67 KFLNSTHALAKIIHSVAHIEFNAINLALDASYRFKNLPLQFYYDWLEVADEEIKHFKLLN 126 Query: 142 DHLSTLGHAYGDFTAHNALWDMAESTKGDVLARIALVPRTLEARGLDAAPPVRAKLAQAG 201 L LG+ YGDF H+ L E+TK + R+ +V R LEA+GLDA P V KL + Sbjct: 127 SALEELGYKYGDFPVHDNLESALEATKDSLSFRMGIVHRGLEAKGLDANPFVVQKLQSSN 186 Query: 202 DLAA---AEILDIIMRDEVGHVLIGNRWFNWLCEQRQLDPVATFAQLCQRHKAPPLRG-P 257 E L+II+ DE+ HV G+ W+ + + + F +LC+ K L G Sbjct: 187 HSIKNLLMEYLEIILNDEIKHVKKGDTWWKFANQNK-----YNFIELCKTFKQFSLAGKK 241 Query: 258 FNLEARRAAGFSDEE 272 N++AR AGF+ EE Sbjct: 242 LNIQARIKAGFTQEE 256 >SMc00523 [S] COG2833 Uncharacterized protein conserved in bacteria Sme Sinorhizobium meliloti Length = 172 Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 72/164 (43%), Positives = 93/164 (56%), Gaps = 7/164 (4%) Query: 13 FTGLRSGALSCLRETRPAAKCSAVRALRAAWQQGRLPLETE-DLAVTEPGSGIPGRPERP 71 F LR A+ +R A K + WQ L L + D V E PGRP +P Sbjct: 7 FHSLRGAAVEAIRAADLAVKTEVAQEAARRWQARTLSLRSPLDRTVPE----RPGRPAKP 62 Query: 72 ELVSPLQVKHRSMGTPEGRAALIHALAHIEFNAINLALDAVWRFAG--MPRDFYADWLQV 129 L P QVK RS+G+ +GR AL+HA+AHIE NA++LALD V RFA +P F+ W+QV Sbjct: 63 VLTPPTQVKRRSLGSLKGRIALLHAIAHIELNAVDLALDIVARFASEPVPNSFFDGWMQV 122 Query: 130 ADEEAYHFSLLADHLSTLGHAYGDFTAHNALWDMAESTKGDVLA 173 A EEA HF ++ L+ LG YGD AH+ LW A T+ D+ A Sbjct: 123 AFEEAKHFRMVRQRLNDLGADYGDLPAHDGLWQAAHDTRNDLTA 166 >SMc00540 [S] COG2833 Uncharacterized protein conserved in bacteria Sme Sinorhizobium meliloti Length = 94 Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 35/79 (44%), Positives = 51/79 (64%) Query: 191 PPVRAKLAQAGDLAAAEILDIIMRDEVGHVLIGNRWFNWLCEQRQLDPVATFAQLCQRHK 250 P +RAK+ + GD +A +LD+I DE GHV +G +WF +LC +++ DP ATF L + + Sbjct: 3 PALRAKMRETGDNESAAVLDVIYEDEKGHVAVGAKWFRFLCARQKKDPAATFQTLVRANF 62 Query: 251 APPLRGPFNLEARRAAGFS 269 PL+ PFN AR AG + Sbjct: 63 RGPLKPPFNDIARAEAGLT 81