BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0226.p (516 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value VC1402 [NT] COG0835 Chemotaxis signal transduction protein Vch V... 321 3e-87 PA1464 [NT] COG0835 Chemotaxis signal transduction protein Pae P... 102 2e-21 STM1920 [NT] COG0835 Chemotaxis signal transduction protein Sty ... 92 4e-18 cheW [NT] COG0835 Chemotaxis signal transduction protein Eco Esc... 91 8e-18 ECs2597 [NT] COG0835 Chemotaxis signal transduction protein Ecs ... 91 8e-18 BH2969 [NT] COG0835 Chemotaxis signal transduction protein Bha B... 89 2e-17 YPO1667 [NT] COG0835 Chemotaxis signal transduction protein Ype ... 89 3e-17 VC2059 [NT] COG0835 Chemotaxis signal transduction protein Vch V... 89 3e-17 MA3070 [NT] COG0835 Chemotaxis signal transduction protein Mac M... 88 4e-17 ZcheW [NT] COG0835 Chemotaxis signal transduction protein EcZ Es... 88 4e-17 >VC1402 [NT] COG0835 Chemotaxis signal transduction protein Vch Vibrio cholerae Length = 520 Score = 321 bits (822), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 197/510 (38%), Positives = 293/510 (57%), Gaps = 40/510 (7%) Query: 27 QFVTFVAGDEVFAVEMAPVQEIIRSPDVVRVPLAPSTLDGLANLRGKILPIVSLRRIFGF 86 Q+V F+ GDE+FA+ M V+EIIR P VPL PS L GL+NLRG+ILP++ LR + Sbjct: 19 QYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLRTLLCM 78 Query: 87 PERDKDDATRAVVINVGQ-PLGFVVDRVASVLDVEADKIEAPEGLQSTIDTELLAGLLKN 145 +ATR +VI +G+ +GF VDRV +V + + I+ ID L+ + Sbjct: 79 DRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDPTLITNTIH- 137 Query: 146 VGGYPVIMVLDFEKLVSR---EFSQIAASARNDVRLHAGLEVHNDDAEAIRNDEL----Q 198 +I VL+ +L+ E +++ N H + H D D+ Q Sbjct: 138 -SDNQIIQVLNCHRLLDNSVEEELELSTQRFN----HLSSQSHFGDVIDEERDDDEDMRQ 192 Query: 199 LVSFRLSGQEYAIDIADVQEIVQVPSGIVRLPHSAEHVIGVMALRSRLLMLVDLRRMFGL 258 LV + GQEYA + D QEIV++P I ++P + ++GV+ LR + L LV LR +FGL Sbjct: 193 LVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLVSLRTLFGL 252 Query: 259 PAQELDDKCRIVVLAHGASS-----IGLAVDSVSEVLRVPKGLVDPLPVALAKSDDAPEI 313 P+ D R++V+ S +G+ VD+V EV+R+ ++D +P ++K A +I Sbjct: 253 PSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKMGQANDI 312 Query: 314 ACVCRLDEGRRLVSVITSKNLLDHSALKDAFNIMSEDHSDDAQPGEEID-TAIDD----- 367 + +C LD+GRR +SVI+ + L D + + D F+ +A P E D + IDD Sbjct: 313 SAICNLDDGRRTLSVISVEQLFD-AQIVDQFS--------EAYPQEGTDMSTIDDVSILE 363 Query: 368 ----DEQMVIFRLDKEEFGVPIHSVQEIVRVPDELVHVPGAPAFVEGVINLRGSVLPVID 423 D Q+VIF+LDKEEFG+ IH+VQEI+R+P+ + VP F+EGVINLRG+VLP++D Sbjct: 364 DDNTDMQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVD 423 Query: 424 LRARLGLPAIERSDGQRIMVFVIADVRTGFIVDQVAEVLRIAKDAIEPAPRFSTQQSALL 483 +R R LP + R + QRI+V + TGFIVD V+EVLRI + +E AP S +Q+ L+ Sbjct: 424 MRKRFHLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDAPVLSEEQAQLM 483 Query: 484 ARMANMEKQGRMVQLLEPAQLINADEMAGL 513 +M N+ RM+ +L QLI+ EM L Sbjct: 484 RQMVNLSP--RMIGVLSADQLISNTEMYKL 511 Score = 149 bits (376), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 157/289 (54%), Gaps = 17/289 (5%) Query: 26 RQFVTFVAGDEVFAVEMAPVQEIIRSPDVV-RVPLAPSTLDGLANLRGKILPIVSLRRIF 84 RQ V + + +A + QEI+R P+++ +VPL S + G+ NLRGK LP+VSLR +F Sbjct: 191 RQLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLVSLRTLF 250 Query: 85 GFPERDKDDATRAVVINVG------QPLGFVVDRVASVLDVEADKIEA-PEGLQSTIDTE 137 G P D+ R +V+N+ P+G VVD V V+ + D +++ PE + Sbjct: 251 GLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKMGQAN 310 Query: 138 LLAGLLKNVGGYPVIMVLDFEKL----VSREFSQIAASARNDVRLHAGLEVHNDDAEAIR 193 ++ + G + V+ E+L + +FS+ D+ + + DD Sbjct: 311 DISAICNLDDGRRTLSVISVEQLFDAQIVDQFSEAYPQEGTDMSTIDDVSILEDD----- 365 Query: 194 NDELQLVSFRLSGQEYAIDIADVQEIVQVPSGIVRLPHSAEHVIGVMALRSRLLMLVDLR 253 N ++QLV F+L +E+ I I VQEI+++P I R+P + + + GV+ LR +L +VD+R Sbjct: 366 NTDMQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDMR 425 Query: 254 RMFGLPAQELDDKCRIVVLAHGASSIGLAVDSVSEVLRVPKGLVDPLPV 302 + F LP ++ RI+V+ S G VDSVSEVLR+P+ ++ PV Sbjct: 426 KRFHLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDAPV 474 >PA1464 [NT] COG0835 Chemotaxis signal transduction protein Pae Pseudomonas aeruginosa Length = 159 Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/148 (39%), Positives = 88/148 (59%), Gaps = 4/148 (2%) Query: 370 QMVIFRLDKEEFGVPIHSVQEIVRVPDELVHVPGAPAFVEGVINLRGSVLPVIDLRARLG 429 Q V FRLD E +G+ + VQE++R E+ VPGAP++V G+INLRG+V+ VID R R G Sbjct: 15 QWVTFRLDNESYGINVMQVQEVLRY-TEIAPVPGAPSYVLGIINLRGNVVTVIDTRQRFG 73 Query: 430 LPAIERSDGQRIMVFVIADVRTGFIVDQVAEVLRIAKDAIEPAPRFSTQQSA-LLARMAN 488 L SD RI++ G +VD VAEV+ + + IE AP ++SA + + N Sbjct: 74 LDPAPVSDNTRIVIIEADKQVVGILVDSVAEVVYLKQSEIETAPNVGNEESAKFIQGVCN 133 Query: 489 MEKQGRMVQLLEPAQLINADEMAGLASL 516 K G ++ L+E +++ +E + L S+ Sbjct: 134 --KNGELLILVELDKMMTEEEWSELGSI 159 Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 70/122 (57%), Gaps = 2/122 (1%) Query: 197 LQLVSFRLSGQEYAIDIADVQEIVQVPSGIVRLPHSAEHVIGVMALRSRLLMLVDLRRMF 256 LQ V+FRL + Y I++ VQE+++ + I +P + +V+G++ LR ++ ++D R+ F Sbjct: 14 LQWVTFRLDNESYGINVMQVQEVLRY-TEIAPVPGAPSYVLGIINLRGNVVTVIDTRQRF 72 Query: 257 GLPAQELDDKCRIVVLAHGASSIGLAVDSVSEVLRVPKGLVDPLPVALAKSDDAPEIACV 316 GL + D RIV++ +G+ VDSV+EV+ + + ++ P + + A I V Sbjct: 73 GLDPAPVSDNTRIVIIEADKQVVGILVDSVAEVVYLKQSEIETAP-NVGNEESAKFIQGV 131 Query: 317 CR 318 C Sbjct: 132 CN 133 Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 79/145 (54%), Gaps = 2/145 (1%) Query: 27 QFVTFVAGDEVFAVEMAPVQEIIRSPDVVRVPLAPSTLDGLANLRGKILPIVSLRRIFGF 86 Q+VTF +E + + + VQE++R ++ VP APS + G+ NLRG ++ ++ R+ FG Sbjct: 15 QWVTFRLDNESYGINVMQVQEVLRYTEIAPVPGAPSYVLGIINLRGNVVTVIDTRQRFGL 74 Query: 87 PERDKDDATRAVVINV-GQPLGFVVDRVASVLDVEADKIEAPEGLQSTIDTELLAGLLKN 145 D TR V+I Q +G +VD VA V+ ++ +IE + + + + G+ Sbjct: 75 DPAPVSDNTRIVIIEADKQVVGILVDSVAEVVYLKQSEIETAPNVGNEESAKFIQGVCNK 134 Query: 146 VGGYPVIMVLDFEKLVSREFSQIAA 170 G +++ LD + + E+S++ + Sbjct: 135 NGELLILVELD-KMMTEEEWSELGS 158 >STM1920 [NT] COG0835 Chemotaxis signal transduction protein Sty Salmonella typhimurium LT2 Length = 167 Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 49/144 (34%), Positives = 85/144 (59%), Gaps = 4/144 (2%) Query: 369 EQMVIFRLDKEEFGVPIHSVQEIVRVPDELVHVPGAPAFVEGVINLRGSVLPVIDLRARL 428 ++ ++F L EE+G+ I VQEI R D++ + PAF++GV NLRG ++P++DLR + Sbjct: 17 QEFLVFTLGNEEYGIDILKVQEI-RGYDQVTRIANTPAFIKGVTNLRGVIVPIVDLRVKF 75 Query: 429 GLPAIERSDGQRIMVFVIADVRTGFIVDQVAEVLRIAKDAIEPAPRFS-TQQSALLARMA 487 +E D ++V + G +VD V++VL + + I PAP F+ T + L + Sbjct: 76 CEGDVEYDDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPAPEFAVTLSTEYLTGLG 135 Query: 488 NMEKQGRMVQLLEPAQLINADEMA 511 + + RM+ L+ +L+N++EMA Sbjct: 136 ALGE--RMLILVNIEKLLNSEEMA 157 Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 11/150 (7%) Query: 17 PSSQERIATRQFVTFVAGDEVFAVEMAPVQEIIRSPDVVRVPLAPSTLDGLANLRGKILP 76 PS QE F+ F G+E + +++ VQEI V R+ P+ + G+ NLRG I+P Sbjct: 14 PSGQE------FLVFTLGNEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTNLRGVIVP 67 Query: 77 IVSLRRIFGFPERDKDDATRAVVINVGQ-PLGFVVDRVASVLDVEADKIE-APEGLQSTI 134 IV LR F + + DD T +V+N+GQ +G VVD V+ VL + A++I APE T+ Sbjct: 68 IVDLRVKFCEGDVEYDDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPAPE-FAVTL 126 Query: 135 DTELLAGLLKNVGGYPVIMVLDFEKLVSRE 164 TE L GL G ++++++ EKL++ E Sbjct: 127 STEYLTGL--GALGERMLILVNIEKLLNSE 154 >cheW [NT] COG0835 Chemotaxis signal transduction protein Eco Escherichia coli K12 Length = 167 Score = 90.5 bits (223), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 50/148 (33%), Positives = 86/148 (58%), Gaps = 4/148 (2%) Query: 369 EQMVIFRLDKEEFGVPIHSVQEIVRVPDELVHVPGAPAFVEGVINLRGSVLPVIDLRARL 428 ++ ++F L EE+G+ I VQEI R D++ + PAF++GV NLRG ++P++DLR + Sbjct: 17 QEFLVFTLGDEEYGIDILKVQEI-RGYDQVTRIANTPAFIKGVTNLRGVIVPIVDLRIKF 75 Query: 429 GLPAIERSDGQRIMVFVIADVRTGFIVDQVAEVLRIAKDAIEPAPRFSTQQSALLARMAN 488 ++ +D ++V + G +VD V++VL + + I PAP F+ S + Sbjct: 76 SQVDVDYNDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPAPEFAVTLST--EYLTG 133 Query: 489 MEKQG-RMVQLLEPAQLINADEMAGLAS 515 + G RM+ L+ +L+N++EMA L S Sbjct: 134 LGALGDRMLILVNIEKLLNSEEMALLDS 161 Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/168 (36%), Positives = 94/168 (55%), Gaps = 11/168 (6%) Query: 11 TSEPDRPSSQERIATRQFVTFVAGDEVFAVEMAPVQEIIRSPDVVRVPLAPSTLDGLANL 70 T PS QE F+ F GDE + +++ VQEI V R+ P+ + G+ NL Sbjct: 8 TKLASEPSGQE------FLVFTLGDEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTNL 61 Query: 71 RGKILPIVSLRRIFGFPERDKDDATRAVVINVGQ-PLGFVVDRVASVLDVEADKIE-APE 128 RG I+PIV LR F + D +D T +V+N+GQ +G VVD V+ VL + A++I APE Sbjct: 62 RGVIVPIVDLRIKFSQVDVDYNDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPAPE 121 Query: 129 GLQSTIDTELLAGLLKNVGGYPVIMVLDFEKLVSREFSQIAASARNDV 176 T+ TE L GL G ++++++ EKL++ E + SA ++V Sbjct: 122 -FAVTLSTEYLTGL--GALGDRMLILVNIEKLLNSEEMALLDSAASEV 166 >ECs2597 [NT] COG0835 Chemotaxis signal transduction protein Ecs Escherichia coli O157:H7 Length = 167 Score = 90.5 bits (223), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 50/148 (33%), Positives = 86/148 (58%), Gaps = 4/148 (2%) Query: 369 EQMVIFRLDKEEFGVPIHSVQEIVRVPDELVHVPGAPAFVEGVINLRGSVLPVIDLRARL 428 ++ ++F L EE+G+ I VQEI R D++ + PAF++GV NLRG ++P++DLR + Sbjct: 17 QEFLVFTLGDEEYGIDILKVQEI-RGYDQVTRIANTPAFIKGVTNLRGVIVPIVDLRIKF 75 Query: 429 GLPAIERSDGQRIMVFVIADVRTGFIVDQVAEVLRIAKDAIEPAPRFSTQQSALLARMAN 488 ++ +D ++V + G +VD V++VL + + I PAP F+ S + Sbjct: 76 SQVDVDYNDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPAPEFAVTLST--EYLTG 133 Query: 489 MEKQG-RMVQLLEPAQLINADEMAGLAS 515 + G RM+ L+ +L+N++EMA L S Sbjct: 134 LGALGDRMLILVNIEKLLNSEEMALLDS 161 Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/168 (36%), Positives = 94/168 (55%), Gaps = 11/168 (6%) Query: 11 TSEPDRPSSQERIATRQFVTFVAGDEVFAVEMAPVQEIIRSPDVVRVPLAPSTLDGLANL 70 T PS QE F+ F GDE + +++ VQEI V R+ P+ + G+ NL Sbjct: 8 TKLASEPSGQE------FLVFTLGDEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTNL 61 Query: 71 RGKILPIVSLRRIFGFPERDKDDATRAVVINVGQ-PLGFVVDRVASVLDVEADKIE-APE 128 RG I+PIV LR F + D +D T +V+N+GQ +G VVD V+ VL + A++I APE Sbjct: 62 RGVIVPIVDLRIKFSQVDVDYNDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPAPE 121 Query: 129 GLQSTIDTELLAGLLKNVGGYPVIMVLDFEKLVSREFSQIAASARNDV 176 T+ TE L GL G ++++++ EKL++ E + SA ++V Sbjct: 122 -FAVTLSTEYLTGL--GALGDRMLILVNIEKLLNSEEMALLDSAASEV 166 >BH2969 [NT] COG0835 Chemotaxis signal transduction protein Bha Bacillus halodurans Length = 155 Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 1/112 (0%) Query: 362 DTAIDDDEQMVIFRLDKEEFGVPIHSVQEIVRVPDELVHVPGAPAFVEGVINLRGSVLPV 421 + A +D ++++F+L EE+ + + +Q I R+ + +PG P++V GV+NLRG + PV Sbjct: 5 EMATKNDLKLIVFQLGDEEYAIEVDYIQSIERM-QPVTRIPGTPSYVIGVMNLRGVITPV 63 Query: 422 IDLRARLGLPAIERSDGQRIMVFVIADVRTGFIVDQVAEVLRIAKDAIEPAP 473 I+LRAR GLPA D RI+V V GF+VD +V+ + + IEP P Sbjct: 64 INLRARFGLPAKAHDDSTRILVIADDGVEIGFVVDGANDVVDVPAEKIEPTP 115 Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/145 (36%), Positives = 85/145 (58%), Gaps = 3/145 (2%) Query: 27 QFVTFVAGDEVFAVEMAPVQEIIRSPDVVRVPLAPSTLDGLANLRGKILPIVSLRRIFGF 86 + + F GDE +A+E+ +Q I R V R+P PS + G+ NLRG I P+++LR FG Sbjct: 13 KLIVFQLGDEEYAIEVDYIQSIERMQPVTRIPGTPSYVIGVMNLRGVITPVINLRARFGL 72 Query: 87 PERDKDDATRAVVI-NVGQPLGFVVDRVASVLDVEADKIEAPEGLQSTIDTELLAGLLKN 145 P + DD+TR +VI + G +GFVVD V+DV A+KIE + + + L G++K Sbjct: 73 PAKAHDDSTRILVIADDGVEIGFVVDGANDVVDVPAEKIEPTPEVVGGVQEDYLRGVVKE 132 Query: 146 VGGYPVIMVLDFEKLVSREFSQIAA 170 + +L+ EK++ R+ Q++ Sbjct: 133 ED--RLFTLLNLEKVIQRKKGQLST 155 Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 44/111 (39%), Positives = 70/111 (63%), Gaps = 2/111 (1%) Query: 191 AIRNDELQLVSFRLSGQEYAIDIADVQEIVQVPSGIVRLPHSAEHVIGVMALRSRLLMLV 250 A +ND L+L+ F+L +EYAI++ +Q I ++ + R+P + +VIGVM LR + ++ Sbjct: 7 ATKND-LKLIVFQLGDEEYAIEVDYIQSIERMQP-VTRIPGTPSYVIGVMNLRGVITPVI 64 Query: 251 DLRRMFGLPAQELDDKCRIVVLAHGASSIGLAVDSVSEVLRVPKGLVDPLP 301 +LR FGLPA+ DD RI+V+A IG VD ++V+ VP ++P P Sbjct: 65 NLRARFGLPAKAHDDSTRILVIADDGVEIGFVVDGANDVVDVPAEKIEPTP 115 >YPO1667 [NT] COG0835 Chemotaxis signal transduction protein Ype Yersinia pestis Length = 165 Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 47/144 (32%), Positives = 86/144 (59%), Gaps = 4/144 (2%) Query: 369 EQMVIFRLDKEEFGVPIHSVQEIVRVPDELVHVPGAPAFVEGVINLRGSVLPVIDLRARL 428 ++ +IF L EE+G+ I VQEI R D++ + PAF++GV NLRG ++P+IDLR + Sbjct: 17 QEFLIFTLGDEEYGIDILKVQEI-RGYDQVTRIANTPAFIKGVTNLRGVIVPIIDLRVKF 75 Query: 429 GLPAIERSDGQRIMVFVIADVRTGFIVDQVAEVLRIAKDAIEPAPRFS-TQQSALLARMA 487 + ++ ++V G +VD V++VL + + I PAP F+ T + L + Sbjct: 76 AQQGVTYNENTVVIVLNFGQRVVGIVVDGVSDVLSLTNEQIRPAPEFAVTLATEYLTGLG 135 Query: 488 NMEKQGRMVQLLEPAQLINADEMA 511 ++ + RM+ L++ +L++++EM+ Sbjct: 136 SLGE--RMLILVDIEKLLSSEEMS 157 Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/141 (36%), Positives = 81/141 (57%), Gaps = 5/141 (3%) Query: 26 RQFVTFVAGDEVFAVEMAPVQEIIRSPDVVRVPLAPSTLDGLANLRGKILPIVSLRRIFG 85 ++F+ F GDE + +++ VQEI V R+ P+ + G+ NLRG I+PI+ LR F Sbjct: 17 QEFLIFTLGDEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTNLRGVIVPIIDLRVKFA 76 Query: 86 FPERDKDDATRAVVINVGQ-PLGFVVDRVASVLDVEADKIE-APEGLQSTIDTELLAGLL 143 ++ T +V+N GQ +G VVD V+ VL + ++I APE T+ TE L GL Sbjct: 77 QQGVTYNENTVVIVLNFGQRVVGIVVDGVSDVLSLTNEQIRPAPE-FAVTLATEYLTGL- 134 Query: 144 KNVGGYPVIMVLDFEKLVSRE 164 G +++++D EKL+S E Sbjct: 135 -GSLGERMLILVDIEKLLSSE 154 >VC2059 [NT] COG0835 Chemotaxis signal transduction protein Vch Vibrio cholerae Length = 174 Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 50/147 (34%), Positives = 86/147 (58%), Gaps = 2/147 (1%) Query: 370 QMVIFRLDKEEFGVPIHSVQEIVRVPDELVHVPGAPAFVEGVINLRGSVLPVIDLRARLG 429 Q V F+L++E +G+ + V+E++R E+ VPGAP +V G+INLRG+V+ VID R+R G Sbjct: 30 QWVTFQLEEETYGINVMQVREVLRYT-EIAPVPGAPDYVLGIINLRGNVVTVIDTRSRFG 88 Query: 430 LPAIERSDGQRIMVFVIADVRTGFIVDQVAEVLRIAKDAIEPAPRFSTQQSALLARMANM 489 L E +D RI+V G +VD VAEV+ + I+ P T +S+ + + Sbjct: 89 LMQGEITDNTRIIVIESERQVIGILVDSVAEVVYLRSSEIDSTPSVGTDESSKFIQGVS- 147 Query: 490 EKQGRMVQLLEPAQLINADEMAGLASL 516 + G+++ L++ + + +E +A + Sbjct: 148 NRDGKLLILVDLNKFLTDEEWDEMAHM 174 Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 47/145 (32%), Positives = 82/145 (56%), Gaps = 4/145 (2%) Query: 194 NDE-LQLVSFRLSGQEYAIDIADVQEIVQVPSGIVRLPHSAEHVIGVMALRSRLLMLVDL 252 NDE LQ V+F+L + Y I++ V+E+++ I +P + ++V+G++ LR ++ ++D Sbjct: 25 NDEVLQWVTFQLEEETYGINVMQVREVLRYTE-IAPVPGAPDYVLGIINLRGNVVTVIDT 83 Query: 253 RRMFGLPAQELDDKCRIVVLAHGASSIGLAVDSVSEVLRVPKGLVDPLPVALAKSDDAPE 312 R FGL E+ D RI+V+ IG+ VDSV+EV+ + +D P ++ + + Sbjct: 84 RSRFGLMQGEITDNTRIIVIESERQVIGILVDSVAEVVYLRSSEIDSTP-SVGTDESSKF 142 Query: 313 IACVCRLDEGRRLVSVITSKNLLDH 337 I V D G+ L+ V +K L D Sbjct: 143 IQGVSNRD-GKLLILVDLNKFLTDE 166 Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 81/145 (55%), Gaps = 4/145 (2%) Query: 27 QFVTFVAGDEVFAVEMAPVQEIIRSPDVVRVPLAPSTLDGLANLRGKILPIVSLRRIFGF 86 Q+VTF +E + + + V+E++R ++ VP AP + G+ NLRG ++ ++ R FG Sbjct: 30 QWVTFQLEEETYGINVMQVREVLRYTEIAPVPGAPDYVLGIINLRGNVVTVIDTRSRFGL 89 Query: 87 PERDKDDATRAVVINVG-QPLGFVVDRVASVLDVEADKIEAPEGLQSTIDTELLAGLLKN 145 + + D TR +VI Q +G +VD VA V+ + + +I++ + + ++ + G+ Sbjct: 90 MQGEITDNTRIIVIESERQVIGILVDSVAEVVYLRSSEIDSTPSVGTDESSKFIQGVSNR 149 Query: 146 VGGYPVIMVLDFEK-LVSREFSQIA 169 G +++++D K L E+ ++A Sbjct: 150 DG--KLLILVDLNKFLTDEEWDEMA 172 >MA3070 [NT] COG0835 Chemotaxis signal transduction protein Mac Methanosarcina acetivorans str.C2A Length = 182 Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 50/148 (33%), Positives = 85/148 (57%), Gaps = 5/148 (3%) Query: 365 IDDDEQMVIFRLDKEEFGVPIHSVQEIVRVPDELVHVPGAPAFVEGVINLRGSVLPVIDL 424 +D+ Q+++F L +E +GV I V+EI+ +P ++ +P P FVEGV+NLRG + +I+L Sbjct: 33 VDNTIQVIVFNLGEERYGVEISQVKEII-LPTQITRIPNMPDFVEGVLNLRGQIAAIINL 91 Query: 425 RARLGLPAIERSDGQRIMVFVIADVRTGFIVDQVAEVLRIAKDAIEPAPRFSTQQ--SAL 482 R RLG + + RI+V + G +VD V+EV ++ IE PRF + S Sbjct: 92 RNRLGKEPKKNDENTRIIVVEYNNATIGMMVDSVSEVRYLSSQNIEEIPRFLALRADSRF 151 Query: 483 LARMANMEKQGRMVQLLEPAQLINADEM 510 L + +E ++ L++ +L + DE+ Sbjct: 152 LKGVGKLEDG--LLTLMDLKELFSEDEL 177 Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 45/148 (30%), Positives = 89/148 (60%), Gaps = 3/148 (2%) Query: 195 DELQLVSFRLSGQEYAIDIADVQEIVQVPSGIVRLPHSAEHVIGVMALRSRLLMLVDLRR 254 + +Q++ F L + Y ++I+ V+EI+ +P+ I R+P+ + V GV+ LR ++ +++LR Sbjct: 35 NTIQVIVFNLGEERYGVEISQVKEII-LPTQITRIPNMPDFVEGVLNLRGQIAAIINLRN 93 Query: 255 MFGLPAQELDDKCRIVVLAHGASSIGLAVDSVSEVLRVPKGLVDPLPVALAKSDDAPEIA 314 G ++ D+ RI+V+ + ++IG+ VDSVSEV + ++ +P LA D+ + Sbjct: 94 RLGKEPKKNDENTRIIVVEYNNATIGMMVDSVSEVRYLSSQNIEEIPRFLALRADSRFLK 153 Query: 315 CVCRLDEGRRLVSVITSKNLLDHSALKD 342 V +L++G L++++ K L LK+ Sbjct: 154 GVGKLEDG--LLTLMDLKELFSEDELKE 179 Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/142 (31%), Positives = 77/142 (54%), Gaps = 4/142 (2%) Query: 25 TRQFVTFVAGDEVFAVEMAPVQEIIRSPDVVRVPLAPSTLDGLANLRGKILPIVSLRRIF 84 T Q + F G+E + VE++ V+EII + R+P P ++G+ NLRG+I I++LR Sbjct: 36 TIQVIVFNLGEERYGVEISQVKEIILPTQITRIPNMPDFVEGVLNLRGQIAAIINLRNRL 95 Query: 85 GFPERDKDDATRAVVINVGQ-PLGFVVDRVASVLDVEADKIEA-PEGLQSTIDTELLAGL 142 G + D+ TR +V+ +G +VD V+ V + + IE P L D+ L G+ Sbjct: 96 GKEPKKNDENTRIIVVEYNNATIGMMVDSVSEVRYLSSQNIEEIPRFLALRADSRFLKGV 155 Query: 143 LKNVGGYPVIMVLDFEKLVSRE 164 K G ++ ++D ++L S + Sbjct: 156 GKLEDG--LLTLMDLKELFSED 175 >ZcheW [NT] COG0835 Chemotaxis signal transduction protein EcZ Escherichia coli O157:H7 EDL933 Length = 167 Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 49/148 (33%), Positives = 85/148 (57%), Gaps = 4/148 (2%) Query: 369 EQMVIFRLDKEEFGVPIHSVQEIVRVPDELVHVPGAPAFVEGVINLRGSVLPVIDLRARL 428 ++ ++F L EE+G+ I VQEI R D++ + PAF++GV NLRG ++P++DLR + Sbjct: 17 QEFLVFTLGDEEYGIDILKVQEI-RGYDQVTRIANTPAFIKGVTNLRGVIVPIVDLRIKF 75 Query: 429 GLPAIERSDGQRIMVFVIADVRTGFIVDQVAEVLRIAKDAIEPAPRFSTQQSALLARMAN 488 ++ +D ++V + G +VD V++VL + + I PAP F+ S + Sbjct: 76 SQVDVDYNDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPAPEFAVTLST--EYLTG 133 Query: 489 MEKQG-RMVQLLEPAQLINADEMAGLAS 515 + G RM+ L+ +L+N++ MA L S Sbjct: 134 LGALGDRMLILVNIEKLLNSEXMALLDS 161 Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 62/168 (36%), Positives = 94/168 (55%), Gaps = 11/168 (6%) Query: 11 TSEPDRPSSQERIATRQFVTFVAGDEVFAVEMAPVQEIIRSPDVVRVPLAPSTLDGLANL 70 T PS QE F+ F GDE + +++ VQEI V R+ P+ + G+ NL Sbjct: 8 TKLASEPSGQE------FLVFTLGDEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTNL 61 Query: 71 RGKILPIVSLRRIFGFPERDKDDATRAVVINVGQ-PLGFVVDRVASVLDVEADKIE-APE 128 RG I+PIV LR F + D +D T +V+N+GQ +G VVD V+ VL + A++I APE Sbjct: 62 RGVIVPIVDLRIKFSQVDVDYNDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPAPE 121 Query: 129 GLQSTIDTELLAGLLKNVGGYPVIMVLDFEKLVSREFSQIAASARNDV 176 T+ TE L GL G ++++++ EKL++ E + SA ++V Sbjct: 122 -FAVTLSTEYLTGL--GALGDRMLILVNIEKLLNSEXMALLDSAASEV 166