BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0148.p (240 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1006 Non COG 265 6e-71 YPO2245 [C] COG2878 Predicted NADH Ype Yersinia pestis 162 7e-40 NMA0061 [C] COG2878 Predicted NADH NmA Neisseria meningitidis Z2491 159 7e-39 NMB0208 [C] COG2878 Predicted NADH Nme Neisseria meningitidis MC58 157 2e-38 VC1016 [C] COG2878 Predicted NADH Vch Vibrio cholerae 156 3e-38 XF0547 [C] COG2878 Predicted NADH Xfa Xylella fastidiosa 9a5c 156 3e-38 HI1684 [C] COG2878 Predicted NADH Hin Haemophilus influenzae 152 7e-37 PA3490 [C] COG2878 Predicted NADH Pae Pseudomonas aeruginosa 151 1e-36 PM0386 [C] COG2878 Predicted NADH Pmu Pasteurella multocida 151 2e-36 ECs2337 [C] COG2878 Predicted NADH Ecs Escherichia coli O157:H7 146 4e-35 >RSc1006 Non COG Length = 268 Score = 265 bits (678), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 144/224 (64%), Positives = 167/224 (74%), Gaps = 2/224 (0%) Query: 6 ITSSASLADRLEDLLPQTQCTKCGYPACRPYAEAIAEGRASYNQCPPGGQEGVARLAQLL 65 ++ + SLADRLEDLLPQTQCTKCGY CRPYAEA+A G A N+CPPGG EG+ RL++ L Sbjct: 2 VSLAPSLADRLEDLLPQTQCTKCGYNGCRPYAEAMARGEALPNRCPPGGAEGIRRLSEAL 61 Query: 66 GR--PVIPLNPEHGSEQPRRLAVIDEAVCIGCTLCIQACPVDAIAGAAKQMHTVIDALCT 123 GR P++ L+ HG EQPR LA+ID CIGCTLCIQACPVDAI GA K MH V++ CT Sbjct: 62 GRTGPLLALDSAHGVEQPRALALIDPERCIGCTLCIQACPVDAIVGAPKAMHVVLEDWCT 121 Query: 124 GCDLCVAPCPVDCISMVEVTPGRTGWQAWRQEQADAARARHAWRTQRLRRDKEENDARLA 183 GCDLCVAPCPVDCI MV T RTGW AW Q QAD AR R+ +R RL R+K EN+ARLA Sbjct: 122 GCDLCVAPCPVDCIDMVPATGERTGWNAWNQAQADEARERYTFRNARLAREKAENEARLA 181 Query: 184 AKAAAKLKEVEAAAAGTPEEQAELARKKAIIQAAMERARLKKLQ 227 KAAAKL V A E+A ARK+AIIQAA+ERAR K+ + Sbjct: 182 EKAAAKLAAVSAEQPADEAERAAQARKQAIIQAAIERARQKQTE 225 >YPO2245 [C] COG2878 Predicted NADH Ype Yersinia pestis Length = 188 Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 75/140 (53%), Positives = 100/140 (71%), Gaps = 1/140 (0%) Query: 12 LADRLEDLLPQTQCTKCGYPACRPYAEAIAEGRASYNQCPPGGQEGVARLAQLLGRPVIP 71 + ++++ +LPQ+QC +CGYP CRPYAEA++ G N+C PGG++ + +LA+LL P Sbjct: 36 VVEQVDAILPQSQCGQCGYPGCRPYAEAVSTGGEKINKCAPGGEQVMLKLAELLAVEPQP 95 Query: 72 LNPEHGSEQP-RRLAVIDEAVCIGCTLCIQACPVDAIAGAAKQMHTVIDALCTGCDLCVA 130 L+ + + P R++A IDEA CIGCT CIQACPVDAI GA + MHTV+ LCTGCDLCVA Sbjct: 96 LDGDESAAHPQRKVAFIDEANCIGCTKCIQACPVDAIIGATRAMHTVLSDLCTGCDLCVA 155 Query: 131 PCPVDCISMVEVTPGRTGWQ 150 PCP DCI M+ V W+ Sbjct: 156 PCPTDCIEMIPVATTTANWK 175 >NMA0061 [C] COG2878 Predicted NADH NmA Neisseria meningitidis Z2491 Length = 279 Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 93/190 (48%), Positives = 116/190 (61%), Gaps = 15/190 (7%) Query: 6 ITSSASLADRLEDLLPQTQCTKCGYPACRPYAEAIAEGRASYNQCPPGGQEGVARLAQLL 65 +T++A+ DRL LPQTQC +CGY C PYA+A+A G A YN C PGG+ + ++ LL Sbjct: 1 MTATAAAIDRL---LPQTQCRECGYDGCLPYAQAVATGEA-YNLCAPGGEAVIRDISALL 56 Query: 66 GRPVIPLNPEHGSEQPRRLAVIDEAVCIGCTLCIQACPVDAIAGAAKQMHTVIDALCTGC 125 G+P++ Q + LA IDE CIGCT CI+ACP DAI GA K MHTVI CTGC Sbjct: 57 GKPLVA----PAKTQAKALAQIDETACIGCTACIRACPADAIMGAGKLMHTVIADECTGC 112 Query: 126 DLCVAPCPVDCISMVEVTPG------RTGWQA-WRQEQADAARARHAWRTQRLRRDKEEN 178 LCVAPCPVDCI M V R A R A+ ARAR+ R +R +R+ +E Sbjct: 113 GLCVAPCPVDCIHMQPVADTVLPRARRFSLSADSRFAAAEHARARYLKRNERKQREADER 172 Query: 179 DARLAAKAAA 188 A LA + AA Sbjct: 173 KAMLAEREAA 182 >NMB0208 [C] COG2878 Predicted NADH Nme Neisseria meningitidis MC58 Length = 279 Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 92/190 (48%), Positives = 114/190 (60%), Gaps = 15/190 (7%) Query: 6 ITSSASLADRLEDLLPQTQCTKCGYPACRPYAEAIAEGRASYNQCPPGGQEGVARLAQLL 65 +T++A+ DRL LPQTQC +CGY C PYA+A+A G A YN C PGG+ + ++ LL Sbjct: 1 MTATAAAIDRL---LPQTQCRECGYDGCLPYAQAVATGEA-YNLCAPGGETVIRDISALL 56 Query: 66 GRPVIPLNPEHGSEQPRRLAVIDEAVCIGCTLCIQACPVDAIAGAAKQMHTVIDALCTGC 125 G+P + Q + LA IDE CIGCT CI+ACP DAI GA K MHTVI CTGC Sbjct: 57 GKPFVA----PAKTQAKALARIDETACIGCTACIRACPADAIMGAGKLMHTVIADECTGC 112 Query: 126 DLCVAPCPVDCISMVEVTPG------RTGWQA-WRQEQADAARARHAWRTQRLRRDKEEN 178 LCVAPCPVDCI M V R A R A+ AR R+ R +R +R+ +E Sbjct: 113 GLCVAPCPVDCIHMQPVADTVLPRARRFSLSADSRFAAAEHARTRYLKRNERKQREADER 172 Query: 179 DARLAAKAAA 188 A LA + AA Sbjct: 173 KAMLAEREAA 182 >VC1016 [C] COG2878 Predicted NADH Vch Vibrio cholerae Length = 195 Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 80/142 (56%), Positives = 97/142 (68%), Gaps = 6/142 (4%) Query: 12 LADRLEDLLPQTQCTKCGYPACRPYAEAIAEGRASYNQCPPGGQEGVARLAQLLGRPVIP 71 + D+++ +LPQTQC +CGYP CRPYAEAIA G A N+CPPGGQ + +LA L+G V Sbjct: 36 IVDQIDAILPQTQCGQCGYPGCRPYAEAIANGDA-INKCPPGGQATIEKLADLMGVEV-- 92 Query: 72 LNPEHG-SEQPRRLAVIDEAVCIGCTLCIQACPVDAIAGAAKQMHTVIDALCTGCDLCVA 130 + H + + +A I E +CIGCT CIQACPVDAI G K +HTVI CTGCDLCVA Sbjct: 93 QDSAHDLDNKVKMVAFIHEDMCIGCTKCIQACPVDAIVGGNKAVHTVIKNECTGCDLCVA 152 Query: 131 PCPVDCISMVEV--TPGRTGWQ 150 PCP DCI M+ V TP WQ Sbjct: 153 PCPTDCIEMIPVQTTPESWKWQ 174 >XF0547 [C] COG2878 Predicted NADH Xfa Xylella fastidiosa 9a5c Length = 159 Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 77/129 (59%), Positives = 95/129 (73%) Query: 11 SLADRLEDLLPQTQCTKCGYPACRPYAEAIAEGRASYNQCPPGGQEGVARLAQLLGRPVI 70 +L +R++ LLPQTQC +CG+ C PYA+A+A G A+ ++CPPGG G LA LLG P Sbjct: 28 TLVERIDRLLPQTQCGQCGFQGCLPYAQAMARGEANIDRCPPGGDAGAHALAHLLGVPPR 87 Query: 71 PLNPEHGSEQPRRLAVIDEAVCIGCTLCIQACPVDAIAGAAKQMHTVIDALCTGCDLCVA 130 P + HG++Q ++A I EA CIGCT CIQACPVDAI G AK MHTVI ALCTGC+LCV Sbjct: 88 PYDRSHGTQQQPQVAWIVEADCIGCTKCIQACPVDAIIGGAKHMHTVIAALCTGCELCVP 147 Query: 131 PCPVDCISM 139 CPVDCI + Sbjct: 148 ACPVDCIEL 156 >HI1684 [C] COG2878 Predicted NADH Hin Haemophilus influenzae Length = 193 Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 73/145 (50%), Positives = 98/145 (67%), Gaps = 6/145 (4%) Query: 12 LADRLEDLLPQTQCTKCGYPACRPYAEAIAEGRASYNQCPPGGQEGVARLAQLLGRPVIP 71 + ++++ +LPQ+QC +CGYP C+PYAEAI G +C PGGQ + ++A++LG V Sbjct: 33 VVEKIDAILPQSQCGQCGYPGCKPYAEAICNGD-EITKCIPGGQTTIVKIAEILGVDVPT 91 Query: 72 LNPEHGSEQP-RRLAVIDEAVCIGCTLCIQACPVDAIAGAAKQMHTVIDALCTGCDLCVA 130 + G E+P ++A IDE +CIGCT CIQACPVDAI G K MHT+I LCTGC+LCVA Sbjct: 92 M---EGIEEPIEKVAFIDENMCIGCTKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVA 148 Query: 131 PCPVDCISMVEVTPGRTGWQAWRQE 155 PCP DCI M+ V W W+ + Sbjct: 149 PCPTDCILMIPVKKNIDNWD-WKFD 172 >PA3490 [C] COG2878 Predicted NADH Pae Pseudomonas aeruginosa Length = 188 Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 82/143 (57%), Positives = 97/143 (67%), Gaps = 4/143 (2%) Query: 12 LADRLEDLLPQTQCTKCGYPACRPYAEAIAEGRASYNQCPPGGQEGVARLAQLLGRPVIP 71 +A+++ LLPQTQC +CGYP C+PYAEAIA G N+CPPGG+ + LA LL P Sbjct: 36 VAEQVNALLPQTQCGQCGYPGCKPYAEAIAAGD-KINKCPPGGEATIRALADLLDLEPEP 94 Query: 72 LNPEHGSEQPRRLAVIDEAVCIGCTLCIQACPVDAIAGAAKQMHTVIDALCTGCDLCVAP 131 L+ E P R+A I EA CIGCT CIQACPVDAI GAA+ MHTVI CTGCDLC+ P Sbjct: 95 LD--AAEETPPRVAYIREAECIGCTKCIQACPVDAIVGAARLMHTVIADECTGCDLCLEP 152 Query: 132 CPVDCISMVEVTPGRTGWQAWRQ 154 CPVDCI M E+ W+ W Q Sbjct: 153 CPVDCIEMREIPDDVRHWK-WPQ 174 >PM0386 [C] COG2878 Predicted NADH Pmu Pasteurella multocida Length = 198 Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 77/160 (48%), Positives = 99/160 (61%), Gaps = 6/160 (3%) Query: 12 LADRLEDLLPQTQCTKCGYPACRPYAEAIAEGRASYNQCPPGGQEGVARLAQLLG-RPVI 70 + ++++ LLPQ+QC +CGYP C+PYAEAIA G +C PGGQ + +A+L+G P Sbjct: 38 IVEKIDALLPQSQCGQCGYPGCKPYAEAIANGD-DITKCIPGGQTVIVNIAELMGVEP-- 94 Query: 71 PLNPEHGSEQPRRLAVIDEAVCIGCTLCIQACPVDAIAGAAKQMHTVIDALCTGCDLCVA 130 P G P +A IDE +CIGCT CIQACPVDAI G K MHT+I LCTGC+LCV Sbjct: 95 PTTDIEGDPAPM-VAFIDEDMCIGCTKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVP 153 Query: 131 PCPVDCISMVEVTPGRTGWQAWRQEQADAARARHAWRTQR 170 PCP DCISM++V W W+ + TQ+ Sbjct: 154 PCPTDCISMIKVESTIHNWN-WKFDPKLVIPIVDTTTTQK 192 >ECs2337 [C] COG2878 Predicted NADH Ecs Escherichia coli O157:H7 Length = 192 Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 74/142 (52%), Positives = 96/142 (67%), Gaps = 3/142 (2%) Query: 12 LADRLEDLLPQTQCTKCGYPACRPYAEAIAEGRASYNQCPPGGQEGVARLAQLLGRPVIP 71 + ++++++LPQ+QC +CGYP CRPYAEAI+ N+C PGG+ + ++A+LL P Sbjct: 36 VVEKIDEILPQSQCGQCGYPGCRPYAEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQP 95 Query: 72 LNPEHGSEQPRRL-AVIDEAVCIGCTLCIQACPVDAIAGAAKQMHTVIDALCTGCDLCVA 130 L+ E P R+ AVIDE CIGCT CIQACPVDAI GA + MHTV+ LCTGC+LCV Sbjct: 96 LDGEAQELTPARMVAVIDENNCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVD 155 Query: 131 PCPVDCISM--VEVTPGRTGWQ 150 PCP CIS+ V TP W Sbjct: 156 PCPTHCISLQPVAETPDSWKWD 177