BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0113.p (201 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1888 [S] COG2128 Uncharacterized conserved protein Rso Ralsto... 301 4e-82 SMb20278 [S] COG2128 Uncharacterized conserved protein Sme Sinor... 168 6e-42 AGpA625 [S] COG2128 Uncharacterized conserved protein Atu Agroba... 163 3e-40 Cgl2381_2 [S] COG2128 Uncharacterized conserved protein Cgl Cory... 118 7e-27 YPO2360_2 [S] COG2128 Uncharacterized conserved protein Ype Yers... 71 1e-12 DR1765 [S] COG2128 Uncharacterized conserved protein Dra Deinoco... 70 2e-12 mlr4105 [S] COG2128 Uncharacterized conserved protein Mlo Mesorh... 66 4e-11 >RSc1888 [S] COG2128 Uncharacterized conserved protein Rso Ralstonia solanacearum Length = 197 Score = 301 bits (772), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 140/194 (72%), Positives = 164/194 (84%) Query: 1 MSDIIKANGFTNETLEWDAWLDVIQLEAASADQIKVLEESHPKAKTSDYYLFLAHQPDIL 60 M++ ++A+GFTN TLEW AWLDV+ L+ A+ QI VLEESHPKAKTSDYY FL HQP+IL Sbjct: 1 MTEPLRAHGFTNATLEWKAWLDVVDLDRATPGQIAVLEESHPKAKTSDYYRFLVHQPEIL 60 Query: 61 RQRSAAFNTIMYAPGGLPRAERELGSLVVSRINGCVYCASVHAQRFEQLAKRNDTVRQVF 120 RQRSAAFN IMYAPGGL RAEREL S VVSR+NGCVYCA+VHAQRFEQLAKRND +RQVF Sbjct: 61 RQRSAAFNAIMYAPGGLSRAERELASTVVSRVNGCVYCAAVHAQRFEQLAKRNDVIRQVF 120 Query: 121 DTPYGAGVDAREQAIAKFSAELTETPGDVSAAQIKALYDVGLSELEVLDLIHSVAIFAWA 180 + P+ AG +ARE+AIA+FS +LT PGDV A ++ L GL++ E+LDLIH+VAIFAWA Sbjct: 121 EDPHTAGTNARERAIARFSIDLTLRPGDVRAEDLQPLQAAGLTDAEILDLIHAVAIFAWA 180 Query: 181 NRLMLNLGEPVFAD 194 NRLMLNLGEPVF D Sbjct: 181 NRLMLNLGEPVFPD 194 >SMb20278 [S] COG2128 Uncharacterized conserved protein Sme Sinorhizobium meliloti Length = 192 Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 80/181 (44%), Positives = 118/181 (65%) Query: 10 FTNETLEWDAWLDVIQLEAASADQIKVLEESHPKAKTSDYYLFLAHQPDILRQRSAAFNT 69 FT E L+W ++ ++L+ A+ +Q++ L+ + K S+Y L LA++ ++L +R+ FN Sbjct: 8 FTLEPLDWQPYVKPVKLDEATPEQLEALKVTPSNTKVSNYVLVLANEAEMLAERTPLFND 67 Query: 70 IMYAPGGLPRAERELGSLVVSRINGCVYCASVHAQRFEQLAKRNDTVRQVFDTPYGAGVD 129 IMY+ GGL R RE+G+L S +N C+YCASVHA R+ QL KR + V +++ A + Sbjct: 68 IMYSEGGLSRGGREIGALAASFVNRCIYCASVHANRYIQLEKRPEVVDEIYRRGLDADLP 127 Query: 130 AREQAIAKFSAELTETPGDVSAAQIKALYDVGLSELEVLDLIHSVAIFAWANRLMLNLGE 189 EQA+ F +LT P +V Q L ++GL +LE+LDLIHS+AIF WANRLM LGE Sbjct: 128 DFEQALFNFGVDLTAHPDNVGVYQFYHLREIGLDDLEILDLIHSIAIFGWANRLMHTLGE 187 Query: 190 P 190 P Sbjct: 188 P 188 >AGpA625 [S] COG2128 Uncharacterized conserved protein Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 192 Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 79/181 (43%), Positives = 112/181 (61%) Query: 10 FTNETLEWDAWLDVIQLEAASADQIKVLEESHPKAKTSDYYLFLAHQPDILRQRSAAFNT 69 FT + LEW ++ + L A+ +Q+ L+ + K S Y L LA++ + L +R+ FN Sbjct: 8 FTLDALEWHPYVKPVDLATATPEQLSALKVTPSNTKVSAYVLVLANEAEALNERTPLFND 67 Query: 70 IMYAPGGLPRAERELGSLVVSRINGCVYCASVHAQRFEQLAKRNDTVRQVFDTPYGAGVD 129 IMY+ GGL R RE+G+L S +N C+YCA+VHA R+ QL KR + V ++ A + Sbjct: 68 IMYSDGGLSRGGREIGALAASFVNHCIYCAAVHANRYIQLEKRPEVVDAIYKNGLDADLP 127 Query: 130 AREQAIAKFSAELTETPGDVSAAQIKALYDVGLSELEVLDLIHSVAIFAWANRLMLNLGE 189 EQA+ F +LT P +V Q L ++GL +LE+LDLIHS+AIF WANRLM LGE Sbjct: 128 DFEQALFNFGVDLTAHPDNVGVYQFYHLREIGLDDLEILDLIHSIAIFGWANRLMHTLGE 187 Query: 190 P 190 P Sbjct: 188 P 188 >Cgl2381_2 [S] COG2128 Uncharacterized conserved protein Cgl Corynebacterium glutamicum Length = 192 Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 72/190 (37%), Positives = 102/190 (53%), Gaps = 10/190 (5%) Query: 6 KANGFTNETLEWDAWLDVIQLEAASADQIKVLEESHPKAKTSDYYLFLAHQPDILRQRSA 65 + F N +L W W+ + + +Q+ L + P+ Y+ LA P L+ R+ Sbjct: 1 RPEAFVNHSLGWKPWVPPVAKADLTEEQLDSLIQ--PERADMPYFRLLARDPAALKARTL 58 Query: 66 AFNTIMYAPGG--LPRAERELGSLVVSRINGCVYCASVHAQRFEQLAKRNDTVRQVF--- 120 I + G L RAERELG+ V SR NGCVYCASVHA R ++ + R D V + Sbjct: 59 TDLDIFFNTDGEGLGRAERELGATVTSRYNGCVYCASVHAGRAQEESGRADDVNALLASI 118 Query: 121 DTPYGAGVDAREQAIAKFSAELTETPGDVSAAQIKALYDVGLSELEVLDLIHSVAIFAWA 180 D+ G+ + I + L+ TP + I L VG S+L+++DLI+SVA F WA Sbjct: 119 DSDLGSD---QWNVIRDAARALSSTPAAFNQGCITKLRGVGFSDLQIVDLINSVAFFNWA 175 Query: 181 NRLMLNLGEP 190 NRLML+LGEP Sbjct: 176 NRLMLSLGEP 185 >YPO2360_2 [S] COG2128 Uncharacterized conserved protein Ype Yersinia pestis Length = 180 Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 81/180 (45%), Gaps = 18/180 (10%) Query: 17 WDAWLDVIQLEAASADQIKVLEESHPKAKTSDYYLFLAHQPDILRQRSAAFNTIMYAPGG 76 W WL AA+ DQ + P S L H +Q A++ I Sbjct: 12 WQGWLPS---HAANDDQ----PDKEPDETASTLTELLGHH----QQSLLAYHAITTHQPN 60 Query: 77 LPRAER---ELGSLVVSRINGCVYCASVHAQRFEQLAKRNDTVRQVFDTPYGAGVDAREQ 133 P+ +R EL +LV +RING +YC + H Q +QL + V ++ A EQ Sbjct: 61 SPQLQRDWLELVALVSARINGSLYCQARHRQHLQQLTEPPLLVTELLKGIDHALFLLPEQ 120 Query: 134 AIAK----FSAELTETPGDVSAAQIKALYDVGLSELEVLDLIHSVAIFAWANRLMLNLGE 189 I +AELT P + +K L +G+S+ +V+ +I S+AI W NRL LG+ Sbjct: 121 QIPHQLISVTAELTRAPERFNHQHVKRLQTLGVSDTQVMRIIFSIAITGWTNRLRHTLGK 180 >DR1765 [S] COG2128 Uncharacterized conserved protein Dra Deinococcus radiodurans Length = 219 Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 64/122 (52%) Query: 67 FNTIMYAPGGLPRAERELGSLVVSRINGCVYCASVHAQRFEQLAKRNDTVRQVFDTPYGA 126 FN ++ GGL AEREL ++VVS +N CVYCA H + + V A Sbjct: 86 FNLLVNKEGGLSNAERELLAVVVSGLNRCVYCAVSHGAALREFSGDAVKADAVAVNWRQA 145 Query: 127 GVDAREQAIAKFSAELTETPGDVSAAQIKALYDVGLSELEVLDLIHSVAIFAWANRLMLN 186 + REQA+ ++ +LT P +++ A + L GLS+ +L+ + +A+F NR+ Sbjct: 146 ELSEREQAMCAYAEKLTLRPAEMTEADLAPLRAAGLSDEAILEAVQVIAMFNMTNRVSSA 205 Query: 187 LG 188 LG Sbjct: 206 LG 207 >mlr4105 [S] COG2128 Uncharacterized conserved protein Mlo Mesorhizobium loti Length = 187 Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 61/124 (49%) Query: 60 LRQRSAAFNTIMYAPGGLPRAERELGSLVVSRINGCVYCASVHAQRFEQLAKRNDTVRQV 119 LR + +N +M GL + +RE+ ++ VS IN C YC + H QL+ + Sbjct: 47 LRAFTDIYNDLMLGESGLSKLDREMIAVAVSSINHCYYCLTAHGAAVRQLSGDPALGEML 106 Query: 120 FDTPYGAGVDAREQAIAKFSAELTETPGDVSAAQIKALYDVGLSELEVLDLIHSVAIFAW 179 A + R+ A+ +F+ +LTE P + A AL G S+ ++ D+ + A F Sbjct: 107 VMNFRAADLSPRQTAMLEFAVKLTEEPAKIVEADRAALRKAGFSDRDIWDIASTAAFFNM 166 Query: 180 ANRL 183 +NR+ Sbjct: 167 SNRV 170