BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0100.p (263 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA5505 [P] COG1464 ABC-type metal ion transport system, periplas... 341 1e-93 PA3931 [P] COG1464 ABC-type metal ion transport system, periplas... 308 7e-84 CC2664 [P] COG1464 ABC-type metal ion transport system, periplas... 295 9e-80 XF0873 [P] COG1464 ABC-type metal ion transport system, periplas... 293 3e-79 DR1359 [P] COG1464 ABC-type metal ion transport system, periplas... 271 1e-72 Cj0772c [P] COG1464 ABC-type metal ion transport system, peripla... 262 7e-70 FN0658 [P] COG1464 ABC-type metal ion transport system, periplas... 259 4e-69 DR1358 [P] COG1464 ABC-type metal ion transport system, periplas... 257 2e-68 CAC0986 [P] COG1464 ABC-type metal ion transport system, peripla... 237 2e-62 HP1564 [P] COG1464 ABC-type metal ion transport system, periplas... 230 3e-60 >PA5505 [P] COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen Pae Pseudomonas aeruginosa Length = 260 Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 169/262 (64%), Positives = 211/262 (80%), Gaps = 2/262 (0%) Query: 2 IRKLIPHLFAGAALAFSVGAHAADKLVIAATPVPHAEILEHIKPALAKEGIDLQIKVFTD 61 ++KL+ A AAL + A AA+ L +AATPVPHAEIL +KP LAKEG+DL+IK FTD Sbjct: 1 MKKLLAAFSAVAALGLT-AAQAAESLTVAATPVPHAEILNVVKPLLAKEGVDLKIKEFTD 59 Query: 62 YVQPAAQTNEKQVDGNFFLHQPYLDQFKKSHKNDIEVPVAKVHVEPFAAYSQKYKKIADI 121 YVQP Q +EK++D NFF HQPYLD+F K+ D+ V V VH+EP AYS KYKK+ ++ Sbjct: 60 YVQPNVQVSEKRLDANFFQHQPYLDEFNKAKGTDL-VAVTGVHIEPLGAYSSKYKKLDEL 118 Query: 122 PNGATIAIPNDPSNSGRALLLLDRNGLIKLKDNTNISATQKDIVENPKKLKFRALEAATL 181 P+GAT+ IPND +N GRALLLLD+ G+IKLKDN +I+AT KDIV+NPK +K R LEAATL Sbjct: 119 PSGATVVIPNDATNGGRALLLLDKAGVIKLKDNKSITATPKDIVDNPKNIKIRELEAATL 178 Query: 182 PRVLNQVDVALINTNYALEAKLNPVKDSLFIEDANSPYANLLVAREDNKDSPAIKKLAAA 241 PRVL QVD+ALINTNYALEAKLNP KD+L IE ++SPY N+LVAR DNKDS A++KLA A Sbjct: 179 PRVLTQVDMALINTNYALEAKLNPTKDALAIEGSDSPYVNILVARPDNKDSDAMQKLAKA 238 Query: 242 LNSPDVKKFIEEKYQGAIVPAF 263 L+S ++K+FI+EKY+GA+VPAF Sbjct: 239 LHSAEIKQFIQEKYKGAVVPAF 260 >PA3931 [P] COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen Pae Pseudomonas aeruginosa Length = 259 Score = 308 bits (790), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 166/247 (67%), Positives = 198/247 (80%), Gaps = 1/247 (0%) Query: 17 FSVGAHAADKLVIAATPVPHAEILEHIKPALAKEGIDLQIKVFTDYVQPAAQTNEKQVDG 76 SV A AA+KL++AATP+PHAEILE IKP LAKEG+DLQIKVFTDYVQP Q EK++D Sbjct: 14 ISVSASAAEKLIVAATPIPHAEILELIKPTLAKEGVDLQIKVFTDYVQPNVQVAEKRLDA 73 Query: 77 NFFLHQPYLDQFKKSHKNDIEVPVAKVHVEPFAAYSQKYKKIADIPNGATIAIPNDPSNS 136 N+F PYL+ F K ++ V V VHVEPF YS+KYK +A++P+GAT+AIPN+ SNS Sbjct: 74 NYFQTLPYLENFNKGKGTNL-VTVVGVHVEPFGGYSRKYKSLAELPDGATVAIPNEGSNS 132 Query: 137 GRALLLLDRNGLIKLKDNTNISATQKDIVENPKKLKFRALEAATLPRVLNQVDVALINTN 196 GRALLLL + GL+KLKD N AT KDI ENPK LKF+ LE+A LPRVL+QVD+ LINTN Sbjct: 133 GRALLLLQKAGLLKLKDPNNALATPKDIAENPKNLKFKELESALLPRVLDQVDLDLINTN 192 Query: 197 YALEAKLNPVKDSLFIEDANSPYANLLVAREDNKDSPAIKKLAAALNSPDVKKFIEEKYQ 256 YALEAKLNP KD+L +ED +SPY N LVAR DNKDS A+KKL+AAL SP+VK FIE+KY Sbjct: 193 YALEAKLNPAKDALVLEDRDSPYVNYLVARPDNKDSDALKKLSAALTSPEVKAFIEKKYA 252 Query: 257 GAIVPAF 263 GA+VPAF Sbjct: 253 GAVVPAF 259 >CC2664 [P] COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen Ccr Caulobacter vibrioides Length = 268 Score = 295 bits (754), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 144/239 (60%), Positives = 180/239 (75%), Gaps = 1/239 (0%) Query: 25 DKLVIAATPVPHAEILEHIKPALAKEGIDLQIKVFTDYVQPAAQTNEKQVDGNFFLHQPY 84 + L +AAT VPHAE+LE IKP LA++G+ L+IKVF DYVQP Q EK++D ++F PY Sbjct: 31 NTLTVAATAVPHAEVLEFIKPKLAQQGLTLEIKVFNDYVQPNTQVAEKRIDVSYFQTLPY 90 Query: 85 LDQFKKSHKNDIEVPVAKVHVEPFAAYSQKYKKIADIPNGATIAIPNDPSNSGRALLLLD 144 L+ F + ++ +P+ VHVEP YS K+K IA++PNGATIAIPND S GRAL+LL Sbjct: 91 LESFNRDKGANL-IPLQGVHVEPIGTYSAKWKSIAEVPNGATIAIPNDASTEGRALILLA 149 Query: 145 RNGLIKLKDNTNISATQKDIVENPKKLKFRALEAATLPRVLNQVDVALINTNYALEAKLN 204 +NG+I +KD N + +DI NPK LKF+ LEA LPRVLNQVD+A+INTNYAL+AKLN Sbjct: 150 KNGVIAIKDPKNPLTSLRDITSNPKNLKFKELEAPALPRVLNQVDLAVINTNYALDAKLN 209 Query: 205 PVKDSLFIEDANSPYANLLVAREDNKDSPAIKKLAAALNSPDVKKFIEEKYQGAIVPAF 263 P KD+L IED SPY N LV R DNKD P +KKLAAAL +P+VK FIE+KY GA+VPAF Sbjct: 210 PSKDALIIEDKTSPYVNYLVGRPDNKDDPRVKKLAAALTTPEVKAFIEQKYAGAVVPAF 268 >XF0873 [P] COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen Xfa Xylella fastidiosa 9a5c Length = 261 Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 148/260 (56%), Positives = 188/260 (72%), Gaps = 5/260 (1%) Query: 8 HLFAGAALAFSVGAHAAD----KLVIAATPVPHAEILEHIKPALAKEGIDLQIKVFTDYV 63 H A VG +D +L IAAT VPHAEILE +KP LAK+GI L I+VF DYV Sbjct: 3 HFLLCVATLLFVGCGPSDSNHDRLSIAATAVPHAEILEFVKPTLAKQGIQLDIRVFNDYV 62 Query: 64 QPAAQTNEKQVDGNFFLHQPYLDQFKKSHKNDIEVPVAKVHVEPFAAYSQKYKKIADIPN 123 QP Q +KQ+D N+F +PYL + +S +N + V VH+EPF AYS++Y +A +P Sbjct: 63 QPNDQVAQKQIDVNYFQTEPYLQAYNRS-RNTHLITVVGVHIEPFGAYSRRYTALASLPK 121 Query: 124 GATIAIPNDPSNSGRALLLLDRNGLIKLKDNTNISATQKDIVENPKKLKFRALEAATLPR 183 GA IAIPNDPSN+ RAL+LL + GLIKLKD N+ ATQ+DI+ENP+ KFR L+AA LPR Sbjct: 122 GAEIAIPNDPSNNSRALILLHQAGLIKLKDPKNMLATQRDILENPRLFKFRELDAAMLPR 181 Query: 184 VLNQVDVALINTNYALEAKLNPVKDSLFIEDANSPYANLLVAREDNKDSPAIKKLAAALN 243 VL+Q+D+ LINTNYAL A L P +D+L IE+ +SPY N LV+REDNKD P ++KLA AL Sbjct: 182 VLDQIDLVLINTNYALSAGLKPNQDALAIENKDSPYVNYLVSREDNKDDPRVQKLAKALT 241 Query: 244 SPDVKKFIEEKYQGAIVPAF 263 SP+VK FI++KY AI+PAF Sbjct: 242 SPEVKDFIDKKYGSAILPAF 261 >DR1359 [P] COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen Dra Deinococcus radiodurans Length = 256 Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 139/241 (57%), Positives = 174/241 (72%), Gaps = 1/241 (0%) Query: 23 AADKLVIAATPVPHAEILEHIKPALAKEGIDLQIKVFTDYVQPAAQTNEKQVDGNFFLHQ 82 AA L + A+PVPHAE+LE +KP LAK+G+ L+I+ FTDYVQP + +D NFF H Sbjct: 17 AAGTLRVGASPVPHAELLEFVKPLLAKQGVKLEIREFTDYVQPNVALADGAIDVNFFQHV 76 Query: 83 PYLDQFKKSHKNDIEVPVAKVHVEPFAAYSQKYKKIADIPNGATIAIPNDPSNSGRALLL 142 PYL+ F+++ I V AKVHVEP YS++ +K++D+ NGATIA+PNDPSNSGRAL L Sbjct: 77 PYLNSFQQNRPLGI-VAGAKVHVEPMGVYSKRVRKLSDLKNGATIALPNDPSNSGRALKL 135 Query: 143 LDRNGLIKLKDNTNISATQKDIVENPKKLKFRALEAATLPRVLNQVDVALINTNYALEAK 202 L+R GLI+LK + ISAT +DI N K+LKFR LEAA LPR L VD A+INTNYALEA Sbjct: 136 LERAGLIRLKPSAGISATVRDITTNLKRLKFRELEAAQLPRALGDVDAAVINTNYALEAG 195 Query: 203 LNPVKDSLFIEDANSPYANLLVAREDNKDSPAIKKLAAALNSPDVKKFIEEKYQGAIVPA 262 LNP+KD+L +ED NSPYAN+L A+ +P KL L S + K FI +KY GAIVPA Sbjct: 196 LNPLKDALKLEDKNSPYANVLAAKPATLKNPDYLKLVRVLQSKETKAFILKKYGGAIVPA 255 Query: 263 F 263 F Sbjct: 256 F 256 >Cj0772c [P] COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen Cje Campylobacter jejuni Length = 257 Score = 262 bits (669), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 134/258 (51%), Positives = 175/258 (67%), Gaps = 3/258 (1%) Query: 6 IPHLFAGAALAFSVGAHAADKLVIAATPVPHAEILEHIKPALAKEGIDLQIKVFTDYVQP 65 I LF + L S+ A+A + + +AATPVPHAEILE +KP L K+G L+IK FTDYV P Sbjct: 3 IKSLFIASILTLSLNANALETITVAATPVPHAEILEQVKPDLEKQGYKLEIKEFTDYVLP 62 Query: 66 AAQTNEKQVDGNFFLHQPYLDQFKKSHKNDIEVPVAKVHVEPFAAYSQKYKKIADIPNGA 125 + + D NFF H PYL++F K+ + + VA +H+EP A YS+KYK + DI G Sbjct: 63 NLAVDNGEADANFFQHTPYLEEFNKNKGTKL-IKVAAIHIEPMAVYSKKYKSLDDIKEGV 121 Query: 126 TIAIPNDPSNSGRALLLLDRNGLIKLKDNTNISATQKDIVENPKKLKFRALEAATLPRVL 185 IAIPNDP+N RAL ++ + GL+K KD T DI++NPKK+KF L+ A LPR L Sbjct: 122 KIAIPNDPTNESRALDIIAKKGLVKFKDKA--LKTPLDIIDNPKKIKFVELKPAQLPRAL 179 Query: 186 NQVDVALINTNYALEAKLNPVKDSLFIEDANSPYANLLVAREDNKDSPAIKKLAAALNSP 245 N VD A+IN+NYAL A LNP KDS+FIED SPYAN+LV R +++ P IK L AL S Sbjct: 180 NDVDFAVINSNYALSANLNPAKDSVFIEDKESPYANILVVRVGHENDPKIKALIQALQSD 239 Query: 246 DVKKFIEEKYQGAIVPAF 263 +K+FI EKY G+++PAF Sbjct: 240 KIKQFIIEKYNGSVLPAF 257 >FN0658 [P] COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen Fnu Fusobacterium nucleatum Length = 261 Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 139/253 (54%), Positives = 176/253 (69%), Gaps = 3/253 (1%) Query: 12 GAALAFSVGAHAADKLVIAATPVPHAEILEHIKPALAKEGIDLQIKVFTDYVQPAAQTNE 71 GA L S GA A L + ATPVPHAEIL+ IKP L K+G+DL+I FTDYV P ++ Sbjct: 11 GAFLLLSAGALAGT-LKVGATPVPHAEILKLIKPDLKKQGVDLKIVEFTDYVTPNLALSD 69 Query: 72 KQVDGNFFLHQPYLDQFKKSHKNDIEVPVAKVHVEPFAAYSQKYKKIADIPNGATIAIPN 131 K++D NFF H+PYLD+F + K ++ V + VHVEP YS+K K I D+ G TIAIP+ Sbjct: 70 KEIDANFFQHKPYLDKFIEERKLNL-VSLGNVHVEPLGLYSKKIKSINDLKKGDTIAIPS 128 Query: 132 DPSNSGRALLLLDRNGLIKLKDNTNISATQKDIVENPKKLKFRALEAATLPRVLNQVDVA 191 DPSN GRAL+LL G+I LKD N+ AT+ DIV+NPKKLKF+ E A LPR+L V A Sbjct: 129 DPSNGGRALILLHNKGVITLKDPKNLFATEFDIVKNPKKLKFKPTEVAQLPRILPDVTAA 188 Query: 192 LINTNYALEAKLNPVKDSLFIEDANSPYANLLVAREDNKDSPAIKKLAAALNSPDVKKFI 251 +IN NYAL+A L+P KDSL +E SPYAN+LV R+ ++ I+KL AL S VKK+I Sbjct: 189 IINGNYALQANLSPAKDSLILEGKESPYANILVVRKGDEKKEDIQKLLKALRSEKVKKYI 248 Query: 252 EEKYQ-GAIVPAF 263 EKY G++VPAF Sbjct: 249 NEKYSDGSVVPAF 261 >DR1358 [P] COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen Dra Deinococcus radiodurans Length = 256 Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 129/255 (50%), Positives = 175/255 (68%), Gaps = 2/255 (0%) Query: 9 LFAGAALAFSVGAHAADKLVIAATPVPHAEILEHIKPALAKEGIDLQIKVFTDYVQPAAQ 68 +FA + AF+ A A L +AATPVP E+LE +KP LAK+G+ L+I+ FTDYVQP Sbjct: 4 IFALSTFAFASLASAGT-LRVAATPVPAGELLEFVKPILAKQGVKLEIREFTDYVQPNVA 62 Query: 69 TNEKQVDGNFFLHQPYLDQFKKSHKNDIEVPVAKVHVEPFAAYSQKYKKIADIPNGATIA 128 E VD N F H PYL+ F+++ I VPV K+++ P YS++ K+ ++ GATIA Sbjct: 63 LGEGSVDANLFQHTPYLNAFQQNRPLGI-VPVKKIYLPPLGLYSKRVSKVTELAKGATIA 121 Query: 129 IPNDPSNSGRALLLLDRNGLIKLKDNTNISATQKDIVENPKKLKFRALEAATLPRVLNQV 188 +PNDPSN RALLLL++ GLI+L+ +SAT KDI+ N K LKFR LEAA LPR L V Sbjct: 122 LPNDPSNEARALLLLEKAGLIRLRAGAGVSATPKDIISNIKGLKFRELEAAQLPRSLQDV 181 Query: 189 DVALINTNYALEAKLNPVKDSLFIEDANSPYANLLVAREDNKDSPAIKKLAAALNSPDVK 248 D A++N NYAL+ L+P KD+LF E NSPY N+L + N ++P +KKL AAL SP+ K Sbjct: 182 DAAIVNANYALDIGLDPTKDALFHEGKNSPYVNILATTKANLNNPDLKKLTAALTSPEAK 241 Query: 249 KFIEEKYQGAIVPAF 263 ++ +KY G+++PAF Sbjct: 242 AWLLKKYGGSVIPAF 256 >CAC0986 [P] COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen Cac Clostridium acetobutylicum Length = 272 Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 128/275 (46%), Positives = 181/275 (65%), Gaps = 15/275 (5%) Query: 1 MIRKLIPHLFAGAALAFSVGAHAA---------DK--LVIAATPVPHAEILEH-IKPALA 48 M +K + L +GA L ++ ++ DK +V+ AT VPHAEIL + +KP L Sbjct: 1 MKKKFLSVLLSGAVLIGALTGCSSSTSSSTSSNDKKTIVVGATAVPHAEILNNAVKPLLK 60 Query: 49 KEGIDLQIKVFTDYVQPAAQTNEKQVDGNFFLHQPYLDQFKKSHKNDIEVPVAKVHVEPF 108 KEG L++KVFTDYV P N+ +D N+F H PYL+ F K D+ V KVH+EP Sbjct: 61 KEGYTLKVKVFTDYVTPNTALNDGDLDANYFQHVPYLETFNKEKHMDLTYTV-KVHIEPM 119 Query: 109 AAYSQKYKKIADIPNGATIAIPNDPSNSGRALLLLDRNGLIKLKDNTNISATQKDIVENP 168 YS K KK++++ +G IA+PND +N RAL +L++NG+IKLK + T+ DI+EN Sbjct: 120 GLYSHKIKKLSELKDGDEIAVPNDSTNESRALKILEQNGIIKLKKADLV--TKLDIIENK 177 Query: 169 KKLKFRALEAATLPRVLNQVDVALINTNYALEAKLNPVKDSLFIEDANSPYANLLVARED 228 K +K + L+AA LPRVL+ V ++IN+NYAL+A LNP KD++ E ++PYAN+L R+ Sbjct: 178 KNIKIKELDAAQLPRVLDDVTASIINSNYALQANLNPTKDAIVSEPKDAPYANVLAVRKQ 237 Query: 229 NKDSPAIKKLAAALNSPDVKKFIEEKYQGAIVPAF 263 +KD P IK L AL SP+VKK+I +KY+G +VPAF Sbjct: 238 DKDKPYIKALNKALTSPEVKKYINDKYKGEVVPAF 272 >HP1564 [P] COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen Hpy Helicobacter pylori 26695 Length = 271 Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 122/238 (51%), Positives = 160/238 (67%), Gaps = 4/238 (1%) Query: 26 KLVIAATPVPHAEILEHIKPALAKEGIDLQIKVFTDYVQPAAQTNEKQVDGNFFLHQPYL 85 +L + A PVPHA+IL+ + L ++GI L I FTDYV P N+ +D N+F H+PYL Sbjct: 38 ELKVGANPVPHAQILQSVVDDLKEKGIKLVIVSFTDYVLPNLALNDGSLDANYFQHRPYL 97 Query: 86 DQFKKSHKNDIEVPVAKVHVEPFAAYSQKYKKIADIPNGATIAIPNDPSNSGRALLLLDR 145 D+F K + V +A +HVEP YSQK I ++ G+ IA+PNDP+N GRAL+LL + Sbjct: 98 DRFNLDRKMHL-VGLANIHVEPLRFYSQKITDIKNLKKGSVIAVPNDPANQGRALILLHK 156 Query: 146 NGLIKLKDNTNISATQKDIVENPKKLKFRALEAATLPRVLNQVDVALINTNYALEAKLNP 205 GLI LKD +N+ AT+ DIV+NP +K + LEAA LP+VL VD A+I NYAL+AKL Sbjct: 157 QGLIALKDPSNLYATEFDIVKNPYNIKIKPLEAALLPKVLGDVDGAIITGNYALQAKLT- 215 Query: 206 VKDSLFIEDANSPYANLLVAREDNKDSPAIKKLAAALNSPDVKKFIEEKYQGAIVPAF 263 +LF ED +SPYANL+ AREDN AIK L AL S +KFI + Y+GAI+PAF Sbjct: 216 --GALFSEDKDSPYANLIAAREDNAQDEAIKTLIEALQSEKTRKFILDTYKGAIIPAF 271