BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0036.p (216 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGl980GM [E] COG0765 ABC-type amino acid transport system, perme... 278 5e-75 AGc2581 [E] COG0765 ABC-type amino acid transport system, permea... 256 3e-68 SMa0081 [E] COG0765 ABC-type amino acid transport system, permea... 237 1e-62 AGc2569 [E] COG0765 ABC-type amino acid transport system, permea... 217 2e-56 YPO3255 [E] COG0765 ABC-type amino acid transport system, permea... 205 5e-53 RSc2105 [E] COG0765 ABC-type amino acid transport system, permea... 205 5e-53 AGpA330 [E] COG0765 ABC-type amino acid transport system, permea... 196 3e-50 mlr4899 [E] COG0765 ABC-type amino acid transport system, permea... 190 2e-48 SMa0503 [E] COG0765 ABC-type amino acid transport system, permea... 189 4e-48 AGl666 [E] COG0765 ABC-type amino acid transport system, permeas... 179 3e-45 >AGl980GM [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 219 Score = 278 bits (712), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 136/213 (63%), Positives = 171/213 (80%) Query: 2 LAEFSFDNFVFLLEAARWTLLLSALAFLGGGIAGFIVALMRTSHLAPLRLLSAVYIQIIQ 61 L F ++ F FLL A +WT+LL+ +A +GGGI GF +AL RTS LR+ + YIQ+IQ Sbjct: 3 LRTFGWNEFGFLLTALQWTVLLTIIALVGGGIVGFFIALARTSDNKLLRIAAGTYIQVIQ 62 Query: 62 GTPVLILLFLSFYGLAIFGYKLPPMVAATIAMTIYSSAYLGEIWRGCIEAVPVPQWEAST 121 G PVL++LFLS+YGL++ G +LPP++AA +MTIY+S YL EIWRGCI+AVP QWEAS Sbjct: 63 GIPVLMILFLSYYGLSLAGLELPPLIAAGASMTIYTSGYLAEIWRGCIQAVPKQQWEASE 122 Query: 122 ALAMTRWQQLRYVILPQAVRISLPPTVGFLVQIVKNTSIASIIGLVELAQAGKLVSNATF 181 +LA+TR QQ RYVILPQA+RISLPPTVGF VQ+VKNTSIASIIG VELA+AG+L++NATF Sbjct: 123 SLALTRAQQYRYVILPQAIRISLPPTVGFAVQVVKNTSIASIIGFVELARAGQLINNATF 182 Query: 182 QPFLVFPIVAGIYFVFCYPLSRFAFALERKYHA 214 QPF VF VA +YF+ CYPLS+ + LER+ HA Sbjct: 183 QPFRVFVAVAVLYFIVCYPLSQLSRWLERRLHA 215 >AGc2581 [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 217 Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 121/215 (56%), Positives = 170/215 (79%) Query: 2 LAEFSFDNFVFLLEAARWTLLLSALAFLGGGIAGFIVALMRTSHLAPLRLLSAVYIQIIQ 61 ++ F + F+FLL A W+++L+A+AF G + G A+MR S +R ++A YI +IQ Sbjct: 1 MSTFGWPEFLFLLRGAGWSIVLTAIAFSIGSLTGGFFAIMRLSQYGSVRNVAAGYITVIQ 60 Query: 62 GTPVLILLFLSFYGLAIFGYKLPPMVAATIAMTIYSSAYLGEIWRGCIEAVPVPQWEAST 121 PVL++LF+S+YGL +FG+++PP++AA++++++Y SAYL EIWRG I+AVP PQWEAS Sbjct: 61 SIPVLMILFMSYYGLTLFGFEIPPLLAASVSLSVYVSAYLAEIWRGSIQAVPKPQWEASA 120 Query: 122 ALAMTRWQQLRYVILPQAVRISLPPTVGFLVQIVKNTSIASIIGLVELAQAGKLVSNATF 181 +LA+TR+QQ RYVILPQA+R+SLPPTVGFLVQ+VKNTSI S++G VEL++AG+LV+NATF Sbjct: 121 SLALTRFQQYRYVILPQALRLSLPPTVGFLVQLVKNTSIVSVVGFVELSRAGQLVNNATF 180 Query: 182 QPFLVFPIVAGIYFVFCYPLSRFAFALERKYHAHR 216 +PF VF +VA +YF C+PLSR + LER H R Sbjct: 181 RPFQVFFVVALLYFAICFPLSRLSRHLERVLHVGR 215 >SMa0081 [E] COG0765 ABC-type amino acid transport system, permease component Sme Sinorhizobium meliloti Length = 218 Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 112/212 (52%), Positives = 161/212 (75%) Query: 1 MLAEFSFDNFVFLLEAARWTLLLSALAFLGGGIAGFIVALMRTSHLAPLRLLSAVYIQII 60 M+ F ++ F+ ++ AA+WT+ LSA+AF GG + G +VALMR S LRL + +I++ Sbjct: 1 MIRAFGWNEFLVIVAAAQWTIALSAIAFAGGSVGGLLVALMRVSETRALRLFATGFIRVF 60 Query: 61 QGTPVLILLFLSFYGLAIFGYKLPPMVAATIAMTIYSSAYLGEIWRGCIEAVPVPQWEAS 120 QGTP+L+ LFL F+G+ IFG+ + P +AATIA+ +++SA+LGEIWRGCIEAVP Q EA+ Sbjct: 61 QGTPLLMQLFLVFFGMNIFGFAINPWIAATIALALHASAFLGEIWRGCIEAVPKGQREAA 120 Query: 121 TALAMTRWQQLRYVILPQAVRISLPPTVGFLVQIVKNTSIASIIGLVELAQAGKLVSNAT 180 TAL + ++ +R+VILPQA RI++ PTVGFLVQ++K TS+ASIIG EL + G++++NAT Sbjct: 121 TALGLRYFRSMRHVILPQAARIAVAPTVGFLVQLIKGTSLASIIGFTELTRQGQIINNAT 180 Query: 181 FQPFLVFPIVAGIYFVFCYPLSRFAFALERKY 212 F PFLVF VA +YF+ C+PLS A +E ++ Sbjct: 181 FSPFLVFGTVAAVYFLLCWPLSLIARRMETRF 212 >AGc2569 [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 219 Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 110/215 (51%), Positives = 160/215 (74%), Gaps = 2/215 (0%) Query: 4 EFS-FDNFVFLLEAARWTLLLSALAFLGGGIAGFIVALMRTSHLAPLRLLSAVYIQIIQG 62 EFS +D LL A RWT+LLS ++F GGG+ ++ MR S +R+ + Y+++ QG Sbjct: 3 EFSTWDILRNLLLATRWTVLLSLVSFAGGGLVALLLLFMRISRKKSMRVFARYYVELFQG 62 Query: 63 TPVLILLFLSFYGLAIFGYKLPPMVAATIAMTIYSSAYLGEIWRGCIEAVPVPQWEASTA 122 TP+L+ LF++F+GL + G +P +AA + + ++++A+L EIWRGC+E+V QWEAS + Sbjct: 63 TPLLMQLFIAFFGLGLVGIDVPAWLAAGLTLILWAAAFLTEIWRGCVESVAKGQWEASAS 122 Query: 123 LAMTRWQQLRYVILPQAVRISLPPTVGFLVQIVKNTSIASIIGLVELAQAGKLVSNATFQ 182 LAM R QQ+RYVILPQA+R+++PPTVGF VQ++K T++ SIIG VEL++AG +V+NATFQ Sbjct: 123 LAMGRLQQMRYVILPQAMRVAIPPTVGFFVQVIKGTAVTSIIGFVELSKAGTVVTNATFQ 182 Query: 183 PFLVFPIVAGIYFVFCYPLSRFAFALERKYH-AHR 216 PF V+ +VA IYF C+PLS+ + LERK + AHR Sbjct: 183 PFTVYGLVALIYFALCWPLSKSSQILERKLNVAHR 217 >YPO3255 [E] COG0765 ABC-type amino acid transport system, permease component Ype Yersinia pestis Length = 217 Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 106/209 (50%), Positives = 147/209 (70%) Query: 6 SFDNFVFLLEAARWTLLLSALAFLGGGIAGFIVALMRTSHLAPLRLLSAVYIQIIQGTPV 65 +D LL AARWTLLLS AF GG + + LMR SH + +Y ++ QGTP+ Sbjct: 5 DWDIIRNLLLAARWTLLLSLTAFFGGTLVTLPLMLMRLSHWRWAARVVRLYTELFQGTPL 64 Query: 66 LILLFLSFYGLAIFGYKLPPMVAATIAMTIYSSAYLGEIWRGCIEAVPVPQWEASTALAM 125 L+ LFL+F+GLA+FG + P AA +A+T+++SA+L +IW G I A+P QWEAS L + Sbjct: 65 LMQLFLAFFGLALFGIDVSPWTAAAMALTLFTSAFLVDIWCGSIAALPKGQWEASRCLGL 124 Query: 126 TRWQQLRYVILPQAVRISLPPTVGFLVQIVKNTSIASIIGLVELAQAGKLVSNATFQPFL 185 + Q L VI PQA+RI++ PTVGF VQ++K T++ASIIG VEL +AG +++N T+QPF Sbjct: 125 SFHQTLFRVIAPQAMRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTYQPFK 184 Query: 186 VFPIVAGIYFVFCYPLSRFAFALERKYHA 214 VF +VA YF+ CYPLSR++ LE+K+HA Sbjct: 185 VFGLVALGYFLMCYPLSRYSHYLEKKFHA 213 >RSc2105 [E] COG0765 ABC-type amino acid transport system, permease component Rso Ralstonia solanacearum Length = 217 Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 100/191 (52%), Positives = 137/191 (71%) Query: 26 LAFLGGGIAGFIVALMRTSHLAPLRLLSAVYIQIIQGTPVLILLFLSFYGLAIFGYKLPP 85 +AF GG AG V R A L+ +S VYIQI Q TP+L+ +FL F+G ++ G ++ P Sbjct: 27 MAFALGGAAGLAVLFARVGRNAGLQRVSQVYIQIFQNTPLLMQMFLVFFGASMAGLEMSP 86 Query: 86 MVAATIAMTIYSSAYLGEIWRGCIEAVPVPQWEASTALAMTRWQQLRYVILPQAVRISLP 145 AA I +T+Y+SAYL E+WRGC+EA+P QWEAS +LAM +QQ+R+V+LPQAVR+S+ Sbjct: 87 WTAAAIGLTLYTSAYLAEVWRGCVEAIPRGQWEASASLAMGYFQQMRHVVLPQAVRMSIA 146 Query: 146 PTVGFLVQIVKNTSIASIIGLVELAQAGKLVSNATFQPFLVFPIVAGIYFVFCYPLSRFA 205 PTVGF VQIVK T++ASIIG +L + G +++NATFQPFL++ +V Y C+PLS A Sbjct: 147 PTVGFSVQIVKGTAVASIIGFEDLTKLGSVLANATFQPFLIYGLVGMAYLALCWPLSLCA 206 Query: 206 FALERKYHAHR 216 LE+K +A R Sbjct: 207 SHLEKKLYAAR 217 >AGpA330 [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 216 Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 98/214 (45%), Positives = 148/214 (69%), Gaps = 1/214 (0%) Query: 4 EFSFDNFVFLLEAARWTLLLSALAFLGGGIAGFIVALMRTSHLAPLRLLSAVYIQIIQGT 63 +FSF + +FL A WT L++A+A G G +A+ RTS LR++++ ++++IQG Sbjct: 3 QFSFSDLLFLATALEWTFLMAAIALAFGVPLGLALAIARTSGSTVLRVIASAFVELIQGI 62 Query: 64 PVLILLFLSFYGLAIF-GYKLPPMVAATIAMTIYSSAYLGEIWRGCIEAVPVPQWEASTA 122 P+L LL ++G+ + G +P +VA A TIY++ +LG+IWRG I+AV QWEA Sbjct: 63 PLLGLLMFFYFGIPVLAGKDVPTVVAVGAAYTIYTAVFLGDIWRGGIQAVRQAQWEAGAC 122 Query: 123 LAMTRWQQLRYVILPQAVRISLPPTVGFLVQIVKNTSIASIIGLVELAQAGKLVSNATFQ 182 L ++ QQ ++I PQA RI+LP TVGFLVQ++KNTS+AS++GLVELA+AG+++S TFQ Sbjct: 123 LGLSWLQQFVHIIGPQAFRIALPATVGFLVQLIKNTSLASVVGLVELARAGQMISAGTFQ 182 Query: 183 PFLVFPIVAGIYFVFCYPLSRFAFALERKYHAHR 216 P LV+ +VA IYF C+PL+ ++ LE + + R Sbjct: 183 PLLVYTLVAAIYFTICFPLTTWSRTLEARLNGAR 216 >mlr4899 [E] COG0765 ABC-type amino acid transport system, permease component Mlo Mesorhizobium loti Length = 215 Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 97/213 (45%), Positives = 144/213 (67%), Gaps = 1/213 (0%) Query: 4 EFSFDNFV-FLLEAARWTLLLSALAFLGGGIAGFIVALMRTSHLAPLRLLSAVYIQIIQG 62 EF+ + V LL A RWT+LLS AF+GG + G V R S R L++ YI + QG Sbjct: 3 EFTLWDIVRNLLLATRWTVLLSLAAFVGGALVGMAVLFFRISKHKWSRRLASGYIALFQG 62 Query: 63 TPVLILLFLSFYGLAIFGYKLPPMVAATIAMTIYSSAYLGEIWRGCIEAVPVPQWEASTA 122 TP+L+ LFL F+GL + G ++ P AA + +T ++SAYL EIWR ++A+P QW+A + Sbjct: 63 TPLLMQLFLMFFGLPMLGLRIEPWTAAVLGLTFFASAYLAEIWRSGVDALPRGQWDAGAS 122 Query: 123 LAMTRWQQLRYVILPQAVRISLPPTVGFLVQIVKNTSIASIIGLVELAQAGKLVSNATFQ 182 L + Q+LR +ILPQA I+ PTVGFLVQ++K+T++ SIIG EL + ++NATF+ Sbjct: 123 LGLHYLQELRLIILPQAFSITRAPTVGFLVQLIKSTALTSIIGFEELVRTSNAINNATFE 182 Query: 183 PFLVFPIVAGIYFVFCYPLSRFAFALERKYHAH 215 PF V+ +VA I+F+ C+PL+++A +LE++ A Sbjct: 183 PFKVYGLVALIFFLMCFPLTQYARSLEKRAAAR 215 >SMa0503 [E] COG0765 ABC-type amino acid transport system, permease component Sme Sinorhizobium meliloti Length = 218 Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 104/207 (50%), Positives = 152/207 (73%) Query: 5 FSFDNFVFLLEAARWTLLLSALAFLGGGIAGFIVALMRTSHLAPLRLLSAVYIQIIQGTP 64 F F+F++ A RWTL L+ LAF+GGGI G ++AL+R + + ++ Y+Q+IQG P Sbjct: 4 FGSPEFLFIVYALRWTLTLTVLAFVGGGIMGIVLALLRIARIRAFSAITTFYMQVIQGLP 63 Query: 65 VLILLFLSFYGLAIFGYKLPPMVAATIAMTIYSSAYLGEIWRGCIEAVPVPQWEASTALA 124 +L+LLFL +Y ++FG ++ + AA IA+TI SSA+LG IW + A+P QWE++ ALA Sbjct: 64 LLVLLFLCYYAPSLFGIEIAALTAAAIALTINSSAFLGAIWESALRAIPKAQWESADALA 123 Query: 125 MTRWQQLRYVILPQAVRISLPPTVGFLVQIVKNTSIASIIGLVELAQAGKLVSNATFQPF 184 +T ++ LR+VI PQA+R++LP TVGFLVQI+K TS+ASIIG +E+ +AG+LVSNATF+P Sbjct: 124 LTPYKTLRFVIAPQAIRLALPSTVGFLVQIIKQTSLASIIGFIEITRAGQLVSNATFEPL 183 Query: 185 LVFPIVAGIYFVFCYPLSRFAFALERK 211 F VA +YF C+PL++ + LER+ Sbjct: 184 KAFLSVAALYFAVCFPLTQLSLWLERR 210 >AGl666 [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 216 Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 147/213 (69%) Query: 2 LAEFSFDNFVFLLEAARWTLLLSALAFLGGGIAGFIVALMRTSHLAPLRLLSAVYIQIIQ 61 +A + FL++ +WTL L+ + F+GGG+ G VAL R + ++ S +I + Q Sbjct: 1 MASIGPNELFFLMQGLKWTLALTLIGFIGGGVFGLCVALARVADSPAIQRASMAFIAVFQ 60 Query: 62 GTPVLILLFLSFYGLAIFGYKLPPMVAATIAMTIYSSAYLGEIWRGCIEAVPVPQWEAST 121 GTP+L+ LF+ +YG+A+ G + +A IA T+++SA+LGEIWRG I+AVP Q EA+ Sbjct: 61 GTPLLMQLFVVYYGVALAGLNVDAWIAVAIAFTLHASAFLGEIWRGGIQAVPKGQTEAAN 120 Query: 122 ALAMTRWQQLRYVILPQAVRISLPPTVGFLVQIVKNTSIASIIGLVELAQAGKLVSNATF 181 AL + +++ V+LPQA +ISLP T+GFLVQ++K TS+A+I+G VEL++AG++VSN TF Sbjct: 121 ALGLHYVSRMKDVVLPQAFKISLPATIGFLVQLIKGTSLAAIVGFVELSRAGQIVSNQTF 180 Query: 182 QPFLVFPIVAGIYFVFCYPLSRFAFALERKYHA 214 +P VF IV IYF+ C+PLS + +E++ A Sbjct: 181 RPLTVFAIVGIIYFLICWPLSLWGAGVEKRLQA 213