BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0028.0008.p (283 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1200 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 404 e-113 BMEII0962 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate tra... 275 1e-73 AGl1202 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 265 8e-71 mll6977 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 262 7e-70 mlr7951 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 199 5e-51 PA3512 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 139 8e-33 CAC0618 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 130 4e-30 BH2681 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 115 9e-26 AGc1933 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 114 2e-25 BS_ssuC [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 112 8e-25 >RSc1200 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Rso Ralstonia solanacearum Length = 263 Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust. Identities = 209/273 (76%), Positives = 226/273 (82%), Gaps = 19/273 (6%) Query: 11 NIRFWQLMVLAIVLVVWHVATRNPQTAFFFGEPLKVAQRIWEWFTVGSGSLEVGIGDTTF 70 ++R WQL +L L VWHVATR+ + AFFFGEPL VAQRIW WF Sbjct: 10 SLRAWQLGLLVATLAVWHVATRSQEVAFFFGEPLIVAQRIWSWFVT-------------- 55 Query: 71 FTLSFPAEIYSHLLITLTETVLAFVIGTVFGLAIGLWLALSPTASAILDPYVKAANSMPR 130 +IY HL +TL ETVLAF IGT GL GLWLALSP+ASA+LDPY+KAANSMPR Sbjct: 56 -----EGDIYQHLGVTLAETVLAFGIGTATGLGAGLWLALSPSASAVLDPYIKAANSMPR 110 Query: 131 VILAPIFAMWFGLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANARMLGANARQLL 190 VILAPIF +WFGLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANARMLGA+ RQLL Sbjct: 111 VILAPIFGVWFGLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANARMLGASRRQLL 170 Query: 191 RTVYLPSATSWVFSSLHTSIGLAFVGAVVGEYLGSARGVGYLILQAEGTFDINTVFAGIV 250 R VYLPSATSWVFSSLHTS+GLAFVGAVVGEYLGSARGVGYLILQAEGTFDINTVFAGIV Sbjct: 171 RFVYLPSATSWVFSSLHTSVGLAFVGAVVGEYLGSARGVGYLILQAEGTFDINTVFAGIV 230 Query: 251 VLTIFALVLDLAVGVIEKRLMKWQPKSGETEKL 283 VLT+FALVLD VG+ EKRLM+WQPK+GETEKL Sbjct: 231 VLTVFALVLDWLVGLAEKRLMRWQPKTGETEKL 263 >BMEII0962 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Bme Brucella melitensis Length = 263 Score = 275 bits (702), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 158/268 (58%), Positives = 190/268 (70%), Gaps = 26/268 (9%) Query: 16 QLMVLAIVLVVWHVATR-----NPQTA-FFFGEPLKVAQRIWEWFTVGSGSLEVGIGDTT 69 QL + V++VWH+ T NP A FFF P VA R ++WF G+ Sbjct: 10 QLGIAVAVILVWHLFTATHLFGNPAKAQFFFATPGDVALRTYKWFVDGT----------- 58 Query: 70 FFTLSFPAEIYSHLLITLTETVLAFVIGTVFGLAIGLWLALSPTASAILDPYVKAANSMP 129 I+ HL ITL E +LAF IG V G+ IG W A P +AI DPYVKAANS+P Sbjct: 59 ---------IWYHLGITLLEAMLAFAIGAVGGVLIGFWFARKPLLAAIFDPYVKAANSLP 109 Query: 130 RVILAPIFAMWFGLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANARMLGANARQL 189 RV+LAPIFA+W GLGIWSKVAL V+LVFFIVFFNVYQGVKEV+ VL+NARMLG N RQL Sbjct: 110 RVVLAPIFALWLGLGIWSKVALGVSLVFFIVFFNVYQGVKEVNQTVLSNARMLGMNERQL 169 Query: 190 LRTVYLPSATSWVFSSLHTSIGLAFVGAVVGEYLGSARGVGYLILQAEGTFDINTVFAGI 249 LR VYLPSA SW+FSSLHT++G A VGAVVGEYLGS+ G+GYLI QAEG FD+ VFAG+ Sbjct: 170 LRNVYLPSALSWMFSSLHTAVGFAVVGAVVGEYLGSSAGLGYLIHQAEGVFDVTGVFAGM 229 Query: 250 VVLTIFALVLDLAVGVIEKRLMKWQPKS 277 +VLT F L++D V +IE+RL+ W+PK+ Sbjct: 230 LVLTAFVLLIDWGVSIIEQRLLVWRPKA 257 >AGl1202 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 265 Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 131/272 (48%), Positives = 184/272 (67%), Gaps = 21/272 (7%) Query: 11 NIRFWQLMVLAIVLVVWHVATRNPQ-TAFFFGEPLKVAQRIWEWFTVGSGSLEVGIGDTT 69 N+R Q+ +L ++L W + + FFF P + +++ +W + D Sbjct: 12 NVRIIQVALLVVLLGGWQLGVSSGAIDRFFFPAPYDIVKQVIDW-----------VADAG 60 Query: 70 FFTLSFPAEIYSHLLITLTETVLAFVIGTVFGLAIGLWLALSPTASAILDPYVKAANSMP 129 F Y H+ ITL+ETVL ++IGT G+ G+WL LSP + +LDP++KA N++P Sbjct: 61 F---------YKHVGITLSETVLGYIIGTGLGVGAGVWLGLSPFVARVLDPFIKAVNAIP 111 Query: 130 RVILAPIFAMWFGLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANARMLGANARQL 189 RV+LAPIF +W GLG+WSKVALAVTLVFF+ FFN QGV+EV+PVVL+N R+LGA L Sbjct: 112 RVVLAPIFVLWLGLGLWSKVALAVTLVFFVTFFNAMQGVREVNPVVLSNTRILGAKRSDL 171 Query: 190 LRTVYLPSATSWVFSSLHTSIGLAFVGAVVGEYLGSARGVGYLILQAEGTFDINTVFAGI 249 LR VY P+A SW+ SSL TS+G A VGA++GEYLG++ G+GYLI ++EG FD VFAGI Sbjct: 172 LRHVYFPAAASWILSSLRTSVGFAVVGAIIGEYLGASAGLGYLIARSEGNFDAVGVFAGI 231 Query: 250 VVLTIFALVLDLAVGVIEKRLMKWQPKSGETE 281 ++L +F L++DL + V EK+L+ W+P +GE Sbjct: 232 IILAVFVLIIDLILDVAEKKLITWRPNNGEER 263 >mll6977 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Mlo Mesorhizobium loti Length = 257 Score = 262 bits (669), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 135/273 (49%), Positives = 180/273 (65%), Gaps = 21/273 (7%) Query: 8 NHKNIRFWQLMVLAIVLVVWHVA-TRNPQTAFFFGEPLKVAQRIWEWFTVGSGSLEVGIG 66 N R QL +L ++ W + FFF PL + +++ W + Sbjct: 2 NATTERLIQLALLVAIVGGWQLGVAAGIIDVFFFPAPLDILKQVASW-----------VM 50 Query: 67 DTTFFTLSFPAEIYSHLLITLTETVLAFVIGTVFGLAIGLWLALSPTASAILDPYVKAAN 126 DT+F Y H+ ITLTETVL +++GT G+A G+WL LS + + ILDP++K N Sbjct: 51 DTSF---------YKHVAITLTETVLGYLVGTALGVAAGVWLGLSRSTARILDPFIKGLN 101 Query: 127 SMPRVILAPIFAMWFGLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANARMLGANA 186 ++PRV+LAPIF +W GLG+WSKVALAVTLVFF+ FFN QGV+EV+PVVL+N R+LGA Sbjct: 102 AIPRVVLAPIFVLWLGLGLWSKVALAVTLVFFVTFFNAMQGVREVNPVVLSNTRILGAKR 161 Query: 187 RQLLRTVYLPSATSWVFSSLHTSIGLAFVGAVVGEYLGSARGVGYLILQAEGTFDINTVF 246 LLR VY P+A SW+ SSL TS+G A VGA++GEYLGS+ G+GYLI QAEG FD VF Sbjct: 162 SDLLRHVYFPAAASWILSSLRTSVGFAVVGAIIGEYLGSSAGLGYLIAQAEGNFDAVGVF 221 Query: 247 AGIVVLTIFALVLDLAVGVIEKRLMKWQPKSGE 279 AGI++L IF L++D + V EK +KW+P + E Sbjct: 222 AGILILAIFVLIIDSILDVAEKHFIKWRPSASE 254 >mlr7951 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Mlo Mesorhizobium loti Length = 292 Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 115/273 (42%), Positives = 172/273 (63%), Gaps = 24/273 (8%) Query: 14 FWQLMVLAIVLVVWHVATR----NPQTAFFFGEPLKVAQRIWEWFTVGSGSLEVGIGDTT 69 FW++ +L L +W +A R +P FF+ P ++QR++EW T G+ Sbjct: 39 FWRVAILVAFLGLWEIAARLAWIDP---FFYAMPSAISQRLYEWTTEGTSE--------- 86 Query: 70 FFTLSFPAEIYSHLLITLTETVLAFVIGTVFGLAIGLWLALSPTASAILDPYVKAANSMP 129 ++ HL +T+ E V+ FV G+V G+ IG+ L + A+ I Y+K NS+P Sbjct: 87 -------GPLWYHLYVTMEEAVIGFVTGSVAGIIIGVALGRNRMAADIFSIYIKVVNSIP 139 Query: 130 RVILAPIFAMWFGLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANARMLGANARQL 189 RV+LAPIF M GLG+ SKVALA +VFF+VF N +QGV+E ++ANAR+LGA+ QL Sbjct: 140 RVVLAPIFIMILGLGLASKVALAFVMVFFVVFHNAFQGVREADRAMIANARILGASNWQL 199 Query: 190 LRTVYLPSATSWVFSSLHTSIGLAFVGAVVGEYLGSARGVGYLILQAEGTFDINTVFAGI 249 R+V +PSA SW+F+SLH S G A +GA+VGE++GS G+G LI A+G+FD ++A I Sbjct: 200 TRSVIVPSAMSWIFASLHVSFGFAIIGAIVGEFVGSRYGIGLLINIAKGSFDAAGMYAAI 259 Query: 250 VVLTIFALVLDLAVGVIEKRLMKWQPKS-GETE 281 V++ + AL + + ++E RL KW+P+ ET+ Sbjct: 260 VIVMVVALGAEYLMTMVEDRLAKWRPQPLNETQ 292 >PA3512 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Pae Pseudomonas aeruginosa Length = 258 Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 77/201 (38%), Positives = 119/201 (59%) Query: 77 AEIYSHLLITLTETVLAFVIGTVFGLAIGLWLALSPTASAILDPYVKAANSMPRVILAPI 136 A + H IT E V+ F +G + G++IG+ L LSPT A+L PY+ A P+V AP+ Sbjct: 53 AGLLEHTAITSLEIVVGFALGALLGVSIGVALGLSPTTEAMLSPYILALQIAPKVAFAPL 112 Query: 137 FAMWFGLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANARMLGANARQLLRTVYLP 196 F MW G ++ K+ +AV +VFF V NV ++ V P ++ R + A+ Q+ R V P Sbjct: 113 FVMWLGYTVYPKILIAVLIVFFPVMINVLSAIRTVDPDMINLVRAMSASRWQIFRLVEFP 172 Query: 197 SATSWVFSSLHTSIGLAFVGAVVGEYLGSARGVGYLILQAEGTFDINTVFAGIVVLTIFA 256 SA + +FS L + LA +G VGE +G +G+G+L++ AEG + VF IV+LT+ Sbjct: 173 SAMAALFSGLRIASTLAVIGVTVGELVGGNKGLGFLLVDAEGQGNTAGVFVAIVMLTLIG 232 Query: 257 LVLDLAVGVIEKRLMKWQPKS 277 ++ AV EKR++ + PK+ Sbjct: 233 VLAYGAVVWAEKRVLHYLPKA 253 >CAC0618 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Cac Clostridium acetobutylicum Length = 264 Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 82/271 (30%), Positives = 144/271 (53%), Gaps = 22/271 (8%) Query: 3 KLFKPNHKNIRFWQLMVLAIVLVVWHVA-TRNPQTAFFFGEPLKVAQRIWEWFTVGSGSL 61 KL + HK I ++++L + V+W +A N F P ++ Q + + + G G+L Sbjct: 13 KLKREKHK-ITLTRILILISIFVLWEIAGDLNIIDPFLTSTPSRMLQSLIKIY--GEGAL 69 Query: 62 EVGIGDTTFFTLSFPAEIYSHLLITLTETVLAFVIGTVFGLAIGLWLALSPTASAILDPY 121 ++H+ IT ETV+ F++ T+ G I + L S AS +LDPY Sbjct: 70 ------------------FTHIGITCFETVVGFLLSTILGTFIAILLWWSDFASKVLDPY 111 Query: 122 VKAANSMPRVILAPIFAMWFGLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANARM 181 + NS+P++ LAPI W G GI + + + V + + V KEV + + Sbjct: 112 LVVLNSLPKIALAPIIIFWMGNGIKAIIVITVLISIVVTIITVLNSFKEVEDEKIKLMKT 171 Query: 182 LGANARQLLRTVYLPSATSWVFSSLHTSIGLAFVGAVVGEYLGSARGVGYLILQAEGTFD 241 GAN Q+L+ + +PS+ + S+L ++GL++VG ++GE+L + G+G+LI+ + Sbjct: 172 FGANKFQILKHLIIPSSIPTLMSALKINVGLSWVGVIMGEFLVAKEGLGFLIVYGGQISE 231 Query: 242 INTVFAGIVVLTIFALVLDLAVGVIEKRLMK 272 ++ V I++L+I A ++ +AV + EKRL K Sbjct: 232 LDMVMMSIIILSILAYLMYVAVAIFEKRLQK 262 >BH2681 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Bha Bacillus halodurans Length = 250 Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 72/256 (28%), Positives = 124/256 (48%), Gaps = 21/256 (8%) Query: 22 IVLVVWHVATRNPQTAFFFGEPLKVAQRIWEWFTVGSGSLEVGIGDTTFFTLSFPAEIYS 81 +++V+W ++ R + P+++ R + + ++ FFT Sbjct: 16 MLMVIWEISARMIGQPYLLPSPIQIVMR------------TIDLSESLFFT--------- 54 Query: 82 HLLITLTETVLAFVIGTVFGLAIGLWLALSPTASAILDPYVKAANSMPRVILAPIFAMWF 141 HL TL + + V G+ + L + + + P + A+ ++P + LAPIF +WF Sbjct: 55 HLPATLAIISIGLALSIVLGILLSLLMFWNERVERAVYPLLVASQTIPVIALAPIFVLWF 114 Query: 142 GLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANARMLGANARQLLRTVYLPSATSW 201 G IWSKVA+ V L FF + N Y G+K + +GA RQL +++PS Sbjct: 115 GYSIWSKVAVTVLLTFFPITVNTYDGLKSTNRQYEELFYTMGATKRQLFYRLFVPSTLPS 174 Query: 202 VFSSLHTSIGLAFVGAVVGEYLGSARGVGYLILQAEGTFDINTVFAGIVVLTIFALVLDL 261 + L ++ LA +GA VGE+LG+ G+GY + FD VFA I +L++ ++ Sbjct: 175 FLTGLRIAVPLAVIGAAVGEWLGANEGLGYFSRRMMTQFDGPGVFAPIFILSLLGILGFA 234 Query: 262 AVGVIEKRLMKWQPKS 277 A+ +E L+ W+ K Sbjct: 235 AIKKLENILLPWRKKQ 250 >AGc1933 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 272 Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 109/201 (54%) Query: 77 AEIYSHLLITLTETVLAFVIGTVFGLAIGLWLALSPTASAILDPYVKAANSMPRVILAPI 136 + I+ + L TL T L F I GLAIGL++ S T A L P + N++P+V L PI Sbjct: 68 SPIWKNSLQTLYTTTLGFAIAVAAGLAIGLFIGWSKTIYAGLYPLMIGFNAIPKVALVPI 127 Query: 137 FAMWFGLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANARMLGANARQLLRTVYLP 196 +WFG+G V A + FF + NV G+ + P R LGA ++ V +P Sbjct: 128 LVIWFGIGTVPAVLTAFLISFFPIVVNVATGLATIEPETEDVLRALGAKKMDIMLKVGIP 187 Query: 197 SATSWVFSSLHTSIGLAFVGAVVGEYLGSARGVGYLILQAEGTFDINTVFAGIVVLTIFA 256 + + F SL +I LAFVG+VV E + S G+G ++ A+ F++ VFAG+++L + Sbjct: 188 RSMPYFFGSLKIAITLAFVGSVVSETVASNYGLGNMMSSAQSQFNVPLVFAGLLMLAVEG 247 Query: 257 LVLDLAVGVIEKRLMKWQPKS 277 + + + +EKR+ W +S Sbjct: 248 IAMYAVMAWLEKRMTGWAHRS 268 >BS_ssuC [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Bsu Bacillus subtilis Length = 276 Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 112/206 (54%) Query: 69 TFFTLSFPAEIYSHLLITLTETVLAFVIGTVFGLAIGLWLALSPTASAILDPYVKAANSM 128 TF L E++ HL I++ L F++G GL IG+ S LDP ++ ++ Sbjct: 66 TFKELILSGELFGHLQISIYRAALGFLLGAGLGLMIGILAGFSKRTELYLDPSLQMLRTV 125 Query: 129 PRVILAPIFAMWFGLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANARMLGANARQ 188 P + + P+F +WFG SK+ L FF V+ N + G++ V + AR+L Q Sbjct: 126 PHLAVTPLFILWFGFDEVSKILLIALGAFFPVYINTFNGIRGVDAKLFEVARVLEFKWHQ 185 Query: 189 LLRTVYLPSATSWVFSSLHTSIGLAFVGAVVGEYLGSARGVGYLILQAEGTFDINTVFAG 248 + V LP+A + + S+G+A++G VV E +GS+ GVGY+I+ A N VFAG Sbjct: 186 QISKVILPAALPNILLGIRLSLGIAWLGLVVAELMGSSSGVGYMIMDARQFSQTNKVFAG 245 Query: 249 IVVLTIFALVLDLAVGVIEKRLMKWQ 274 I++ + + D V ++E++L+KW+ Sbjct: 246 IIIFAVVGKLTDSFVRLLERKLLKWR 271