BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0028.0005.p         (270 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

STM2668 [G] COG3386 Gluconolactonase Sty Salmonella typhimurium LT2    76   6e-14
SMa0717_2 [G] COG3386 Gluconolactonase Sme Sinorhizobium meliloti      59   8e-09

>STM2668 [G] COG3386 Gluconolactonase Sty Salmonella typhimurium LT2
          Length = 302

 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 43/79 (54%)

Query: 6  PVCILPAQAQLGECPRWDEQAQQLVWVDILARRLHRYDPASGRDRYVELPEAIGCVALAE 65
          P  +      L ECP W E    L W DIL + +HRY PASG    +  PE +GC AL E
Sbjct: 4  PHVLFDYVGHLPECPTWSEDESALYWTDILEQEIHRYHPASGTHSVLVFPEEVGCFALRE 63

Query: 66 EGGYIAGLRSGLWQLDQAG 84
          +GG+I  +R  +W  D+ G
Sbjct: 64 QGGFIVAMRHAIWLADKNG 82


>SMa0717_2 [G] COG3386 Gluconolactonase Sme Sinorhizobium meliloti
          Length = 302

 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 41/74 (55%)

Query: 8  CILPAQAQLGECPRWDEQAQQLVWVDILARRLHRYDPASGRDRYVELPEAIGCVALAEEG 67
          C+LP  AQLGE P W E+ ++L WVDIL   +HR+DP +G++    + + +  V      
Sbjct: 18 CVLPWGAQLGEAPVWVEREKRLYWVDILHPAVHRFDPVTGKNESCNVAKLVSAVLPTRNE 77

Query: 68 GYIAGLRSGLWQLD 81
          G I   + G+   D
Sbjct: 78 GLIVASQDGVEHFD 91