BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0336.p         (154 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA2169 Non COG                                                        142   3e-34
RSc2163 Non COG                                                       107   8e-24

>PA2169 Non COG
          Length = 150

 Score =  142 bits (357), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 67/143 (46%), Positives = 100/143 (69%), Gaps = 2/143 (1%)

Query: 4   DHLISTLNDLIQISMDGEKGFRACADDAQERYIPYKDTFMARATECAQTVLDLQDLVRRL 63
           D  +  LNDL+Q S DGE GF ACA+D ++  +  K   + ++ +CA    +L+ +V  L
Sbjct: 7   DDTLDVLNDLLQTSKDGEAGFHACAEDLRDPQL--KAAMLEQSRDCAAAADELERIVLEL 64

Query: 64  GGEPASHSTLGGALHRQWVNLKSAITGRDDESILEECERGEDAAVNAYRKALSEDLPTDI 123
           GG+P   ++  G LHR+WV+LKS +TG+D+E++L ECERGED A + Y+ AL + LP +I
Sbjct: 65  GGKPKDSTSFAGDLHRRWVDLKSLVTGKDEEAVLNECERGEDVAKHRYQAALEKSLPAEI 124

Query: 124 RLLIERQYQGVLANHDKVKSLRN 146
             +IERQYQGVL +HD+V++LR+
Sbjct: 125 HQVIERQYQGVLRHHDRVRALRD 147


>RSc2163 Non COG
          Length = 150

 Score =  107 bits (268), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 2   TNDHLISTLNDLIQISMDGEKGFRACADDAQERYIP-YKDTFMARATECAQTVLDLQDLV 60
           T D ++  LN LI++  + E    +C+  A+E + P  +D     A  C  +V +LQ LV
Sbjct: 4   TQDGIVLALNRLIEVGKNDEL---SCSSGAREVHDPQLRDILTDAAQSCRASVQELQQLV 60

Query: 61  RRLGGEPASHSTLGGALHRQWVNLKSAITGRDDESILEECERGEDAAVNAYRKALSEDLP 120
           R LGG+P    ++ G LHR W+ ++  IT  DD+ +LE CER ED A + Y+  L +DLP
Sbjct: 61  RSLGGQPRDRGSMNGTLHRGWMEIRHLITPNDDDVVLEMCEREEDIARHEYQTTLQQDLP 120

Query: 121 TDIRLLIERQYQGVLANHDKVKSLR 145
            +IR +++RQY+G+  + +++ ++R
Sbjct: 121 AEIRAVVQRQYEGIQLHRERIHAMR 145