BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0303.p (159 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0728 [K] COG1327 Predicted transcriptional regulator, consist... 212 3e-55 VC2272 [K] COG1327 Predicted transcriptional regulator, consists... 179 2e-45 ybaD [K] COG1327 Predicted transcriptional regulator, consists o... 166 2e-41 ZybaD [K] COG1327 Predicted transcriptional regulator, consists ... 166 2e-41 ECs0466 [K] COG1327 Predicted transcriptional regulator, consist... 166 2e-41 XF0948 [K] COG1327 Predicted transcriptional regulator, consists... 164 7e-41 STM0415 [K] COG1327 Predicted transcriptional regulator, consist... 164 7e-41 PM0750 [K] COG1327 Predicted transcriptional regulator, consists... 163 2e-40 HI0943 [K] COG1327 Predicted transcriptional regulator, consists... 163 2e-40 YPO3184 [K] COG1327 Predicted transcriptional regulator, consist... 162 3e-40 >RSc0728 [K] COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Rso Ralstonia solanacearum Length = 149 Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 100/149 (67%), Positives = 123/149 (82%) Query: 1 MKCPFCNHEDTPVLDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTE 60 MKCPFC H T V+DTR+SE+G ++RRRRRC +CD+RFTTYERIEL P +VKKNGSR + Sbjct: 1 MKCPFCGHAATQVIDTRMSEEGDTVRRRRRCESCDRRFTTYERIELFFPAVVKKNGSRVD 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLD 120 +D K++ S+ LALRKRPVSAEA+D AI I++KLL GE+E+ S +IGELVMRELKRLD Sbjct: 61 YDRNKVKDSMRLALRKRPVSAEAIDEAIARIEEKLLSHGEKEIGSDRIGELVMRELKRLD 120 Query: 121 KIAYIRFASVYKSFEDVAEFQDAIAEVGQ 149 KI YIRFASVY+SFEDV+EF+D + E Q Sbjct: 121 KIGYIRFASVYRSFEDVSEFRDMLDEFRQ 149 >VC2272 [K] COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Vch Vibrio cholerae Length = 156 Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 85/147 (57%), Positives = 111/147 (75%) Query: 1 MKCPFCNHEDTPVLDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTE 60 M CPFC+ DT V+D+RL DGH +RRRR+C C++RFTT+E EL +P ++K NG+R Sbjct: 8 MHCPFCSENDTKVIDSRLVADGHQVRRRRQCLACNERFTTFETAELVMPRVIKSNGNREP 67 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLD 120 FD K+ G L AL KRPVSA+A+++AI +I+ KL +GEREV S IG LVM +LK LD Sbjct: 68 FDEEKMIGGLQRALEKRPVSADAIELAISTIKSKLRATGEREVPSKLIGNLVMEQLKVLD 127 Query: 121 KIAYIRFASVYKSFEDVAEFQDAIAEV 147 K+AYIRFASVY+SFEDV EF + IA++ Sbjct: 128 KVAYIRFASVYRSFEDVREFGEEIAKL 154 >ybaD [K] COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Eco Escherichia coli K12 Length = 149 Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 81/145 (55%), Positives = 106/145 (73%) Query: 1 MKCPFCNHEDTPVLDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTE 60 M CPFC DT V+D+RL +G S+RRRR+C C++RFTT+E EL +P +VK N R Sbjct: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLD 120 F+ KLR ++ AL KRPVS++ V+MAI I+ +L +GEREV S IG LVM +LK+LD Sbjct: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 Query: 121 KIAYIRFASVYKSFEDVAEFQDAIA 145 K+AYIRFASVY+SFED+ EF + IA Sbjct: 121 KVAYIRFASVYRSFEDIKEFGEEIA 145 >ZybaD [K] COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains EcZ Escherichia coli O157:H7 EDL933 Length = 149 Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 81/145 (55%), Positives = 106/145 (73%) Query: 1 MKCPFCNHEDTPVLDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTE 60 M CPFC DT V+D+RL +G S+RRRR+C C++RFTT+E EL +P +VK N R Sbjct: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLD 120 F+ KLR ++ AL KRPVS++ V+MAI I+ +L +GEREV S IG LVM +LK+LD Sbjct: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 Query: 121 KIAYIRFASVYKSFEDVAEFQDAIA 145 K+AYIRFASVY+SFED+ EF + IA Sbjct: 121 KVAYIRFASVYRSFEDIKEFGEEIA 145 >ECs0466 [K] COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Ecs Escherichia coli O157:H7 Length = 149 Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 81/145 (55%), Positives = 106/145 (73%) Query: 1 MKCPFCNHEDTPVLDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTE 60 M CPFC DT V+D+RL +G S+RRRR+C C++RFTT+E EL +P +VK N R Sbjct: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLD 120 F+ KLR ++ AL KRPVS++ V+MAI I+ +L +GEREV S IG LVM +LK+LD Sbjct: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 Query: 121 KIAYIRFASVYKSFEDVAEFQDAIA 145 K+AYIRFASVY+SFED+ EF + IA Sbjct: 121 KVAYIRFASVYRSFEDIKEFGEEIA 145 >XF0948 [K] COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Xfa Xylella fastidiosa 9a5c Length = 181 Score = 164 bits (415), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 80/150 (53%), Positives = 110/150 (73%) Query: 1 MKCPFCNHEDTPVLDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTE 60 M C FC H T V+D+R+SEDG +IRRRR C C +RF+T E IEL LPVI+KK+G R Sbjct: 1 MYCLFCQHTYTRVIDSRVSEDGATIRRRRECEACGERFSTLETIELKLPVIIKKDGGREA 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLD 120 FD KLR S AL+KRPV+ E ++MA++++ +L +GEREV S +GE VM EL++LD Sbjct: 61 FDGRKLRTSFDRALQKRPVAEECIEMALRAVIHRLRMAGEREVPSIVVGEYVMAELRKLD 120 Query: 121 KIAYIRFASVYKSFEDVAEFQDAIAEVGQE 150 + Y+RFASVY+SF+DVA+F++ I ++ E Sbjct: 121 HVGYVRFASVYRSFQDVADFREEIEKLESE 150 >STM0415 [K] COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Sty Salmonella typhimurium LT2 Length = 149 Score = 164 bits (415), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 79/145 (54%), Positives = 106/145 (73%) Query: 1 MKCPFCNHEDTPVLDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTE 60 M CPFC DT V+D+RL +G S+RRRR+C C++RFTT+E EL +P ++K N R Sbjct: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVIKSNDVREP 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLD 120 F+ KLR ++ AL KRPVSA+ V+MA+ I+ +L +GEREV S IG LVM +LK+LD Sbjct: 61 FNEDKLRSGMLRALEKRPVSADDVEMALNHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 Query: 121 KIAYIRFASVYKSFEDVAEFQDAIA 145 K+AYIRFASVY+SFED+ +F + IA Sbjct: 121 KVAYIRFASVYRSFEDIKDFGEEIA 145 >PM0750 [K] COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Pmu Pasteurella multocida Length = 149 Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 77/144 (53%), Positives = 102/144 (70%) Query: 1 MKCPFCNHEDTPVLDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTE 60 M CPFC+ E+T V+D+RL +G+ +RRRR CGNC +RFTT+E EL +P ++K +G+R Sbjct: 1 MHCPFCSTEETKVIDSRLVSEGYQVRRRRECGNCHERFTTFETAELIIPKVIKNDGTREP 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLD 120 F+ KLR + AL KRPVS V+ AI I +L +GEREV S +G LVM ELK+LD Sbjct: 61 FNEEKLRRGIQHALEKRPVSENDVEKAISYIIHRLRSTGEREVPSKLVGTLVMEELKKLD 120 Query: 121 KIAYIRFASVYKSFEDVAEFQDAI 144 K+AYIRFASVY SF+D+ +F I Sbjct: 121 KVAYIRFASVYLSFDDINQFSKEI 144 >HI0943 [K] COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Hin Haemophilus influenzae Length = 149 Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 77/140 (55%), Positives = 103/140 (73%) Query: 1 MKCPFCNHEDTPVLDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTE 60 M CPFC+ E+T V+D+RL DG+ +RRRR CG+C +RFTT+E EL +P I+K +G+R Sbjct: 1 MHCPFCDTEETKVIDSRLVSDGYQVRRRRECGHCHERFTTFEMAELIIPKIIKTDGTREP 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLD 120 F+ KLR + AL KRPVSA+ V+ AI I +L +GEREV S +G+L M ELK+LD Sbjct: 61 FNEDKLRSGIQHALEKRPVSADDVEKAINHIILQLRATGEREVPSKLVGKLAMNELKKLD 120 Query: 121 KIAYIRFASVYKSFEDVAEF 140 K+AYIRFASVY SF+D+ +F Sbjct: 121 KVAYIRFASVYLSFDDIDQF 140 >YPO3184 [K] COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Ype Yersinia pestis Length = 149 Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 79/145 (54%), Positives = 104/145 (71%) Query: 1 MKCPFCNHEDTPVLDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTE 60 M CPFC DT V+D+RL DG +RRRR+C +C++RFTT+E EL LP ++K + R Sbjct: 1 MHCPFCAAVDTKVIDSRLVSDGSQVRRRRQCLDCNERFTTFEVAELVLPRVIKSDEVREP 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLD 120 F+ KLR ++ AL KRPVS++ V+ AI I+ +L +GEREV + +G LVM LKRLD Sbjct: 61 FNEEKLRRGMLKALEKRPVSSDDVETAISHIKSQLRATGEREVPTKMVGNLVMEALKRLD 120 Query: 121 KIAYIRFASVYKSFEDVAEFQDAIA 145 K+AYIRFASVY+SFEDV EF + IA Sbjct: 121 KVAYIRFASVYRSFEDVREFGEEIA 145