BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0250.p (129 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value NMA0616 [S] COG2510 Predicted membrane protein NmA Neisseria men... 79 2e-15 NMB1840 [S] COG2510 Predicted membrane protein Nme Neisseria men... 79 2e-15 alr2616 [S] COG2510 Predicted membrane protein Nos Nostoc sp. PC... 76 2e-14 BMEI0697 Non COG 69 2e-12 PAB0665 [S] COG2510 Predicted membrane protein Pab Pyrococcus ab... 67 7e-12 YPO2687 [S] COG2510 Predicted membrane protein Ype Yersinia pestis 62 3e-10 PA5444 [S] COG2510 Predicted membrane protein Pae Pseudomonas ae... 62 3e-10 PH1270 [S] COG2510 Predicted membrane protein Pho Pyrococcus hor... 57 8e-09 >NMA0616 [S] COG2510 Predicted membrane protein NmA Neisseria meningitidis Z2491 Length = 143 Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/125 (38%), Positives = 74/125 (59%) Query: 3 FAGFTSVIAKLGLTGISADLGLAIRTCFVFVFVLLFAAAVVPASQLDMLTWKNFFWLGLS 62 FA T++ AK+GL GI +D IRT + +LLF ++ T KN+ +L LS Sbjct: 16 FASLTAIFAKMGLQGIDSDFATFIRTLVILAALLLFLTYTGKWQGVNGFTGKNWTFLILS 75 Query: 63 GVTTAASWVFYYKAIKLGDVSTVALIDKGSVVVAVLLACWILNEAITPAKLAGAALIAGG 122 G+ T ASW+ Y+KA++LG+ S VA +DK S+V+ L+A L+E + G L+ G Sbjct: 76 GLATGASWLAYFKALQLGNASQVAPVDKFSLVLVALMAVVFLDERPNTQEWIGLGLVTAG 135 Query: 123 LVVIA 127 ++V+A Sbjct: 136 VLVLA 140 >NMB1840 [S] COG2510 Predicted membrane protein Nme Neisseria meningitidis MC58 Length = 143 Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/125 (38%), Positives = 74/125 (59%) Query: 3 FAGFTSVIAKLGLTGISADLGLAIRTCFVFVFVLLFAAAVVPASQLDMLTWKNFFWLGLS 62 FA T++ AK+GL GI +D IRT + +LLF ++ T +N+ +L LS Sbjct: 16 FASLTAIFAKMGLQGIDSDFATFIRTLVILAALLLFLTYTGKWQGVNGFTGRNWTFLILS 75 Query: 63 GVTTAASWVFYYKAIKLGDVSTVALIDKGSVVVAVLLACWILNEAITPAKLAGAALIAGG 122 G+ T ASW+ Y+KA++LG+ S VA IDK S+V+ L+A L+E + G L+ G Sbjct: 76 GLATGASWLAYFKALQLGNASQVAPIDKFSLVLVALMAVVFLDERPNTQEWIGLGLVTAG 135 Query: 123 LVVIA 127 ++V+A Sbjct: 136 VLVLA 140 >alr2616 [S] COG2510 Predicted membrane protein Nos Nostoc sp. PCC 7120 Length = 143 Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 47/131 (35%), Positives = 75/131 (57%), Gaps = 10/131 (7%) Query: 3 FAGFTSVIAKLGLTGISADLGLAIRTCFVFVFVLLFA--AAVVPASQLDML---TWKNFF 57 FA T++ K+G+ I+ +L AIRT V+LF V QLD L + K Sbjct: 18 FAALTTIFGKIGVEAINPNLATAIRTV-----VILFMVWGWVFAKGQLDTLLIISPKTLL 72 Query: 58 WLGLSGVTTAASWVFYYKAIKLGDVSTVALIDKGSVVVAVLLACWILNEAITPAKLAGAA 117 +L SG++T SW+FY++A+++G S VA +DK S+V+ ++ + L E++TP + G Sbjct: 73 FLVFSGLSTGLSWLFYFRALQVGKASLVAPLDKSSLVLVIIFSALFLKESLTPQIMIGTG 132 Query: 118 LIAGGLVVIAR 128 LI G +V+ R Sbjct: 133 LILAGTLVLIR 143 >BMEI0697 Non COG Length = 143 Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/125 (34%), Positives = 72/125 (57%) Query: 3 FAGFTSVIAKLGLTGISADLGLAIRTCFVFVFVLLFAAAVVPASQLDMLTWKNFFWLGLS 62 FA T++ AK+G+ GI++D +RT + + LF + ++ +++ +L LS Sbjct: 16 FAALTAIFAKVGIQGINSDFATLVRTFVIIGALCLFLTVTGQWQKPGEISARSWLFLVLS 75 Query: 63 GVTTAASWVFYYKAIKLGDVSTVALIDKGSVVVAVLLACWILNEAITPAKLAGAALIAGG 122 G+ T ASW+ Y++A+++GD S VA IDK SVV+ L L E ++ G LI G Sbjct: 76 GLATGASWLAYFRALQIGDASRVAPIDKLSVVLVALFGAAFLGERMSTINWIGILLIGCG 135 Query: 123 LVVIA 127 +V++A Sbjct: 136 VVLVA 140 >PAB0665 [S] COG2510 Predicted membrane protein Pab Pyrococcus abyssi Length = 137 Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 47/125 (37%), Positives = 64/125 (51%), Gaps = 2/125 (1%) Query: 3 FAGFTSVIAKLGLTGISADLGLAIRTCFVFVFVLLFAAAVVPASQLDMLTWKNFFWLGLS 62 FA + KLGL + A L IR + +F L A + S LT KN ++ S Sbjct: 14 FASLVPIFGKLGLKNVDATLATTIRAVIMAIF--LVGVAFLTGSTKGSLTAKNLLFIAFS 71 Query: 63 GVTTAASWVFYYKAIKLGDVSTVALIDKGSVVVAVLLACWILNEAITPAKLAGAALIAGG 122 G+ A SW+FY+ AIK G V V IDK SV +AV L+ IL E + GA LI G Sbjct: 72 GLAGALSWLFYFMAIKEGKVPAVVAIDKTSVALAVFLSWLILGENMNIKTAIGALLIVIG 131 Query: 123 LVVIA 127 ++++ Sbjct: 132 AILVS 136 >YPO2687 [S] COG2510 Predicted membrane protein Ype Yersinia pestis Length = 142 Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/127 (37%), Positives = 67/127 (52%), Gaps = 8/127 (6%) Query: 8 SVIAKLGLTGISADLGLAIRTCFVFVFVLLFAAAVVPASQLDML-----TWKNFFWLGLS 62 ++ K+GL + A+ A+R V L VV + +++ K ++ LS Sbjct: 19 AIFGKIGLQHLDANTATAVRAV---VMALFLVGVVVVQGKFNLVGTVLADKKALLFIVLS 75 Query: 63 GVTTAASWVFYYKAIKLGDVSTVALIDKGSVVVAVLLACWILNEAITPAKLAGAALIAGG 122 GV A SW+FY+ AIK G VS VA IDK SVV AVLLA + E I+ G ALI G Sbjct: 76 GVAGALSWLFYFMAIKNGTVSQVAPIDKLSVVFAVLLAFILFGEKISLVAGLGVALITAG 135 Query: 123 LVVIARG 129 +++A G Sbjct: 136 ALMVALG 142 >PA5444 [S] COG2510 Predicted membrane protein Pae Pseudomonas aeruginosa Length = 142 Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 8/123 (6%) Query: 9 VIAKLGLTGISADLGLAIRTCFVFV----FVLLFAAAVVPASQLDMLTWKNFFWLGLSGV 64 + AK+GL + +D IRT + V + + P S L +++ +L LSG+ Sbjct: 21 IFAKIGLDRVDSDFATFIRTLVILVTLGGILAVLGKFQAPGSILP----RSWLFLVLSGL 76 Query: 65 TTAASWVFYYKAIKLGDVSTVALIDKGSVVVAVLLACWILNEAITPAKLAGAALIAGGLV 124 T ASW+ Y++A+KLG S VA +DK SVV+ LL L E + + G AL+ G+V Sbjct: 77 ATGASWICYFRALKLGPASLVAPLDKFSVVLVALLGVAFLGERLDLRQWLGVALVTAGVV 136 Query: 125 VIA 127 V+A Sbjct: 137 VLA 139 >PH1270 [S] COG2510 Predicted membrane protein Pho Pyrococcus horikoshii Length = 140 Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 2/125 (1%) Query: 3 FAGFTSVIAKLGLTGISADLGLAIRTCFVFVFVLLFAAAVVPASQLDMLTWKNFFWLGLS 62 FA + K+GL + + IR + +F++ V P ++ + + ++ LS Sbjct: 17 FASLVPIFGKIGLKDVDPTMATTIRAIIMAIFLVTVTFFVKP--KMSGINRYSILFITLS 74 Query: 63 GVTTAASWVFYYKAIKLGDVSTVALIDKGSVVVAVLLACWILNEAITPAKLAGAALIAGG 122 GV+ A SW+FY+ AIK G V V IDK SV +A+ L+ +L + + GA LI G Sbjct: 75 GVSGALSWLFYFMAIKNGRVPAVVAIDKTSVALAIFLSWLVLGSEMNIKTVIGALLIVLG 134 Query: 123 LVVIA 127 ++++ Sbjct: 135 AILVS 139