BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0218.p (455 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA4900 [GEPR] COG0477 Permeases of the major facilitator superfa... 394 e-109 RSc1093 [GEPR] COG0477 Permeases of the major facilitator superf... 276 8e-74 Cgl2967 [GEPR] COG0477 Permeases of the major facilitator superf... 241 2e-63 Cgl2357 [GEPR] COG0477 Permeases of the major facilitator superf... 233 5e-61 AGc4589 [GEPR] COG0477 Permeases of the major facilitator superf... 233 8e-61 Cgl1052 [GEPR] COG0477 Permeases of the major facilitator superf... 231 4e-60 ECs3031 [GEPR] COG0477 Permeases of the major facilitator superf... 211 3e-54 Z3394 [GEPR] COG0477 Permeases of the major facilitator superfam... 211 4e-54 RSp0896 [GEPR] COG0477 Permeases of the major facilitator superf... 208 3e-53 STM2179 [GEPR] COG0477 Permeases of the major facilitator superf... 202 1e-51 >PA4900 [GEPR] COG0477 Permeases of the major facilitator superfamily Pae Pseudomonas aeruginosa Length = 446 Score = 394 bits (1012), Expect = e-109, Method: Compositional matrix adjust. Identities = 217/448 (48%), Positives = 301/448 (67%), Gaps = 7/448 (1%) Query: 1 MKTLDVSQIIDGARFTKFHWMVMCLCALLLVFDGYDLFIYGAVLPVLMKEWSLSPVQAGA 60 M + +ID ARF + HW+++ +++FDGYD+ IYG+V+P LM+EW LSPVQAG Sbjct: 1 MNRQSAAAVIDAARFNRTHWLILGWGCFIMLFDGYDMVIYGSVVPRLMQEWQLSPVQAGT 60 Query: 61 LGSYALFGMMFGAFIFGPLADRIGRKKGVAISFVLFSVSTFLSGFATSPTEFGVYRFLAG 120 LGS ALFGM+FG + PLADR GR++ V + +L S++ FL+G A P E G RF G Sbjct: 61 LGSCALFGMLFGGTLLAPLADRFGRRRLVIATTLLASLAAFLTGHARDPLELGAGRFFTG 120 Query: 121 LGCGGLMPNAVALMNEYAPKRLRSTLVAIMFSGYSLGGVLCAGLGIWMLPNFGWQSMFFA 180 L G L+P+A+ L++E+AP RSTLV +M + YS+G VL A L I M+P +GWQS+F+ Sbjct: 121 LALGALVPSAINLISEFAPAGRRSTLVTVMSAFYSVGAVLSALLAIAMIPAWGWQSVFYV 180 Query: 181 AAVPLVLLPVILWKLPESVGFLLRQGRLEQARAMLTQVDPQARIATDTQLVQADVKGAGA 240 A +P++ +P++L LPES FL +GR + A+L +VDP R + +A+ A A Sbjct: 181 AVLPVLAVPLMLRWLPESAAFLELKGRRAELDALLRKVDPDYRPGAE----RANAVAAEA 236 Query: 241 P---MLHLFKQDRAVGTLMIWVSFFCCLLMVYALGSWLPKLMASAGYSLGSSLSFLLALN 297 P + LF+ +AVGTL++WV+F C+LM Y L +WLPKLMA GY+LGSSL+FL+ LN Sbjct: 237 PSGRVAQLFEGRQAVGTLLLWVAFAMCMLMSYGLNTWLPKLMAGGGYALGSSLAFLVTLN 296 Query: 298 FGGVVGAIGGGWLGDRFTLPKVVVSFFTVGTVAIALLGFNSPTPVLYLLIIVAGATTIGT 357 G +GA+ GGWL DR + +V FF + ++A LG +L L++VAGATTIGT Sbjct: 297 VGATLGALFGGWLADRLGAGRTLVLFFALAAASLAALGLGPGPWLLNGLLVVAGATTIGT 356 Query: 358 QILLYANTAQFYPLAIRSTGLGWASGVGRSGAIVGPLLGGALMAAALPLKMNFLVFAIPG 417 +++A AQFYP +RSTG+GWA+GVGR GAI GP+LGG+L+A LP + NFL FA PG Sbjct: 357 LAVIHAYAAQFYPAWVRSTGVGWAAGVGRLGAIAGPMLGGSLLALELPFQQNFLAFAAPG 416 Query: 418 LVAALAMGLFMLRYRHGSQASHAAPAAK 445 ++ ALA+ LR R ++AS A A K Sbjct: 417 VIGALAIACIHLRPRVPAEASVDATAKK 444 >RSc1093 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 454 Score = 276 bits (705), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 169/448 (37%), Positives = 251/448 (56%), Gaps = 11/448 (2%) Query: 4 LDVSQIIDGARFTKFHWMVMCLCALLLVFDGYDLFIYGAVLPVLMKEWSLSPVQAGALGS 63 +DV +D RF+ F W V+ LC ++ DG+D G + P L ++W + P G + S Sbjct: 8 IDVRAWLDRQRFSAFQWSVVLLCFFVVAIDGFDTACVGFIAPALAQDWHIGPAVLGTVFS 67 Query: 64 YALFGMMFGAFIFGPLADRIGRKKGVAISFVLFSVSTFLSGFATSPTEFGVYRFLAGLGC 123 L G+M GA IFGPLADRIGRK+ + + F +++ LS FA S RFL GLG Sbjct: 68 AGLAGLMVGALIFGPLADRIGRKQTLLFTVGAFGLASVLSAFAPSVGALVALRFLTGLGL 127 Query: 124 GGLMPNAVALMNEYAPKRLRSTLVAIMFSGYSLGGVLCAGLGIWMLPNFGWQS-MFFAAA 182 GG MPNA+AL +EY P+R R+ L +MF G++LG + ++P FGW+S + F Sbjct: 128 GGAMPNAIALTSEYCPERRRAFLTTVMFCGFTLGSGFGGIVAAQLVPEFGWRSVLLFGGV 187 Query: 183 VPLVLLPVILWKLPESVGFLLRQGRLEQARAMLTQVDPQARIATDTQLV--QADVKGA-G 239 +PL+LLPV+++ LPESV +L+ +G A L ++ DT+ V + KGA G Sbjct: 188 IPLLLLPVMVFALPESVRYLVAKGGQSAAVGRLLNRIAPVQVTPDTRFVLHETAAKGAPG 247 Query: 240 APMLHLFKQDRAVGTLMIWVSFFCCLLMVYALGSWLPKLMASAGYSLGSSLSFLLALNFG 299 +P+ LF GTL++W FF LL+VY + +WLP L+ S G +L + + G Sbjct: 248 SPVRQLFLPAFRTGTLLLWSVFFMSLLIVYLMTNWLPTLIHSGGVALALASRIAVMYQLG 307 Query: 300 GVVGAIGGGWLGDRFTLPKVVVSFFTVGTVAIALLGFNSPTPVLYLLIIVAGATTIGTQI 359 G VGA+ G + DR+ V+ + +G + L G + T +L + + G G+QI Sbjct: 308 GTVGALVIGRMMDRYPATVVLCCTYGLGAGFLVLTGVSQGT-MLAIAVTGVGFCISGSQI 366 Query: 360 LLYANTAQFYPLAIRSTGLGWASGVGRSGAIVGPLLGGALMAAALPLKMNFLVFAIPGLV 419 A AQFYP A R TG+ WA G+GR G++ G L+GG L+AA + ++ FL+ A+P + Sbjct: 367 GANAFAAQFYPTASRVTGISWALGIGRLGSVCGALIGGVLLAANIGFQLLFLLVAVPAAI 426 Query: 420 AALAMGLFMLRYRHGSQASHAAPAAKAP 447 A+LA+ + G+QA H P Sbjct: 427 ASLAI------FLCGAQARHVETQGALP 448 >Cgl2967 [GEPR] COG0477 Permeases of the major facilitator superfamily Cgl Corynebacterium glutamicum Length = 444 Score = 241 bits (615), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 154/390 (39%), Positives = 216/390 (55%), Gaps = 33/390 (8%) Query: 30 LVFDGYDLFIYGAVLPVLMKEWSLSPVQAGALGSYALFGMMFGAFIFGPLADRIGRKKGV 89 ++FDGYDL +YG V L KEW+LS G +GS A FGM GA G L+DR+GRK V Sbjct: 51 VIFDGYDLIVYGTVQSALAKEWNLSSATLGTIGSTAFFGMAIGAVFIGRLSDRVGRKAAV 110 Query: 90 AISFVLFSVSTFLSGFATSPTEFGVYRFLAGLGCGGLMPNAVALMNEYAPKRLRSTLVAI 149 S ++ SV T L FA +P FG +RF+AGLG GGL+P+ A+ ++ P++ S + Sbjct: 111 IGSVLILSVFTMLCAFAPNPWVFGAFRFIAGLGLGGLVPSVNAMTSDLVPRKTMSAWATV 170 Query: 150 MFSGYSLGGVLCAGLGIWMLPN---FGWQSMFFAAAVPLVL-LPVILWKLPESVGFLLRQ 205 M SG +GG + A L + ++P+ +GW+ MF A +PLV+ LP+ + +P Sbjct: 171 MMSGVPIGGSIAAVLALVVVPSSEEWGWRFMFLIALIPLVVGLPIAMKVIPS-------- 222 Query: 206 GRLEQARAMLTQVDPQARIATDTQLVQADVKGAGAPMLHLFKQDRAVGTLMIWVSF--FC 263 I D + + + AG L L + R + IW + F Sbjct: 223 ---------------DKAIKADHDIREGHDEPAGFKDL-LVDRYRWIS---IWFALATFV 263 Query: 264 CLLMVYALGSWLPKLMASAGYSLGSSLSFLLALNFGGVVGAIGGGWLGDRFTLPKVVVSF 323 LL Y LG+WLP+LM +AGY G +L F LALN G V+G++ W GDRF + V Sbjct: 264 TLLAWYGLGTWLPRLMETAGYEFGHALMFTLALNLGAVIGSVVTAWAGDRFGPIRSGVIA 323 Query: 324 FTVGTVAIALLGFNSPTPVLYLLIIVAGATTIGTQILLYANTAQFYPLAIRSTGLGWASG 383 + +A+ LL P +Y+++I+AG T GTQIL+ A A FYP +R T LGWA G Sbjct: 324 AGIAGIALLLLLTYPPVTAVYVILILAGVGTHGTQILIIAAVANFYPSNLRGTALGWALG 383 Query: 384 VGRSGAIVGPLLGGALMAAALPLKMNFLVF 413 VGR GA+V P L G L+A L + NF++F Sbjct: 384 VGRIGAVVAPQLAGLLLAWNLGVNSNFIMF 413 >Cgl2357 [GEPR] COG0477 Permeases of the major facilitator superfamily Cgl Corynebacterium glutamicum Length = 446 Score = 233 bits (595), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 150/404 (37%), Positives = 220/404 (54%), Gaps = 12/404 (2%) Query: 7 SQIIDGARFTKFH---WMVMCLCALLLVFDGYDLFIYGAVLPVLMKE----WSLSPVQAG 59 SQI G + K +MV+ + + ++FDGYDL IYGAVL L+++ +LSP AG Sbjct: 3 SQISGGWQSAKHRTTVYMVLVVVGISILFDGYDLVIYGAVLSTLLEDPTQIGALSPAVAG 62 Query: 60 ALGSYALFGMMFGAFIFGPLADRIGRKKGVAISFVLFSVSTFLSGFATSPTEFGVYRFLA 119 LGSYA+ G+M GA G + DR+GR+K + + V FSV L+ FA+S FG RFL Sbjct: 63 TLGSYAMIGVMIGALSAGAVGDRLGRRKVMLTAIVWFSVGMALTAFASSIALFGFLRFLT 122 Query: 120 GLGCGGLMPNAVALMNEYAPKRLRSTLVAIMFSGYSLGGVLCAGLGIWMLPNFGWQSMFF 179 GLG G ++ A++ E+AP R+ AI++SG GGVL + L + GW+ +F Sbjct: 123 GLGVGMIVATGGAIIAEFAPANRRNLFNAIVYSGVPAGGVLASILALLFEDVIGWRGLFL 182 Query: 180 AAAVPLV-LLPVILWKLPESVGFLLRQGRLEQARAMLTQVDPQARIATDTQLVQADVKGA 238 PL+ LLP+ + LPES +L +GR A+A+ + + T+ +V+ + Sbjct: 183 IGGSPLLFLLPLAYFFLPESPRWLTSRGRAADAKALCARYG----LPTEEFVVEKQQETK 238 Query: 239 GAPMLHLFKQDRAVGTLMIWVSFFCCLLMVYALGSWLPKLMASAGYSLGSSLSFLLALNF 298 G +F +GT++I F LL Y L +WLPK+M S G + SL LL LN Sbjct: 239 GTGFAGIFSSKYLMGTILIGAMSFIGLLSTYGLNTWLPKIMESNGATSHDSLYSLLFLNG 298 Query: 299 GGVVGAIGGGWLGDRFTLPKVVVSFFTVGTVAIALLGFNSPTPVLYLLIIVAGATTIGTQ 358 G V G + W DR V+ S F + + + +L S P++Y I AG +GTQ Sbjct: 299 GAVFGGLIASWFADRIGAKTVITSTFALAAICLGVLPNISSWPMMYTAIAFAGVGVLGTQ 358 Query: 359 ILLYANTAQFYPLAIRSTGLGWASGVGRSGAIVGPLLGGALMAA 402 +L Y T+ F+ R+ G+ W +G GR G IVGP +GG ++ A Sbjct: 359 VLTYGLTSNFFGTECRAAGVAWCAGFGRLGGIVGPAIGGLIIGA 402 >AGc4589 [GEPR] COG0477 Permeases of the major facilitator superfamily Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 477 Score = 233 bits (594), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 160/424 (37%), Positives = 234/424 (55%), Gaps = 12/424 (2%) Query: 16 TKFHWMVMCLCALLLVFDGYDLFIYGAVLPVLMKE--WSLSPVQAGALGSYALFGMMFGA 73 TK V+ C L+++FDGYDL +YGAV P L+KE W+L+P G + L GM+ GA Sbjct: 62 TKNPAGVIATCGLMIMFDGYDLVVYGAVAPALLKESTWALNPAMVGRAAALTLVGMLLGA 121 Query: 74 FIFGPLADRIGRKKGVAISFVLFSVSTFLSGFATSPTEFGVYRFLAGLGCGGLMPNAVAL 133 G +ADRIGR+K V +S FS S + F + RF AGLG G L+P AL Sbjct: 122 LFAGTMADRIGRRKVVLLSLAGFSAMMIASAMTPNFLAFEITRFFAGLGLGALLPTVTAL 181 Query: 134 MNEYAPKRLRSTLVAIMFSGYSLGGVLCAGLGIWMLPNFGWQSMFFAAAVPLVLLPVILW 193 + E++P + R+ ++ F GY +GG++ LG+ +L ++GW+ + +PL+LLP+ + Sbjct: 182 VLEFSPPQRRAQANSLSFLGYLIGGIISGILGMLLLESYGWRPLMLIGGLPLILLPIFMR 241 Query: 194 KLPESVGFLLRQGRLEQARAMLTQVDPQARIATDTQLVQADVKGAGAPMLHLFKQDRAVG 253 LPES +L +GR +A + Q RI ++ + G GA LF + R Sbjct: 242 FLPESPEWLASKGRQAEADGICDSYGLQ-RIVPHAKMQKG---GVGA----LFSEGRLAS 293 Query: 254 TLMIWVSFFCCLLMVYALGSWLPKLMASAGYSLGSSLSFLLALNFGGVVGAIGGGWLGDR 313 TL W FC LL+ + + +WLP +M GY + S+LSF + LN G +G + GG D+ Sbjct: 294 TLNAWGIHFCSLLLTFGMVNWLPTIMNKMGYDISSALSFSVMLNVGAAIGILIGGRFADK 353 Query: 314 FTLPKVVVSFFTVGTVAIALLGFNSPTPVLYLLIIVAGATTIGTQILLYANTAQFYPLAI 373 + VV F VG +I L N P+LY+ + +AGA TIGTQIL + YP+ I Sbjct: 354 GNVKVVVAILFAVGAASIFALTANK-GPLLYVFVALAGAGTIGTQILANVLVGRLYPVHI 412 Query: 374 RSTGLGWASGVGRSGAIVGPLLGGALMAAALPLKMNFLVFAIPGLVAALAMGLFMLRYRH 433 R TGLG++ VGR G I GP++GG ++ L + NF +F +V L + + L YR Sbjct: 413 RGTGLGFSLAVGRLGGIAGPMIGGLVLQRGLAPEWNFYIFGSVAVV-GLMLTVLTLLYRT 471 Query: 434 GSQA 437 A Sbjct: 472 SGDA 475 >Cgl1052 [GEPR] COG0477 Permeases of the major facilitator superfamily Cgl Corynebacterium glutamicum Length = 431 Score = 231 bits (588), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 155/426 (36%), Positives = 240/426 (56%), Gaps = 6/426 (1%) Query: 14 RFTKFHWMVMCLCALLLVFDGYDLFIYGAVLPVLMKE--WSLSPVQAGALGSYALFGMMF 71 R TK V+ L +V DG+DL + GA +P ++++ W L+ QA + + L GM Sbjct: 8 RATKSVGTVLALLWFAIVLDGFDLVVLGATIPSMLEDPAWDLTAGQATQISTIGLVGMTI 67 Query: 72 GAFIFGPLADRIGRKKGVAISFVLFSVSTFLSGFATSPTEFGVYRFLAGLGCGGLMPNAV 131 GA G L DR+GR++ + S +FSV T L F T+ F ++RFLAG+G GG +P A+ Sbjct: 68 GALTIGFLTDRLGRRRVMLFSVAVFSVFTLLLAFTTNVQLFSLWRFLAGVGLGGALPTAI 127 Query: 132 ALMNEYAPKRLRSTLVAIMFSGYSLGGVLCAGLGIWMLPNFGWQSMFFAAAVP-LVLLPV 190 A++ E+ P + + +GY +G V A LG++++ FGW SMF A AVP L+LLP+ Sbjct: 128 AMVTEFRPGTKAGSASTTLMTGYHVGAVATAFLGLFLIDGFGWHSMFIAGAVPGLILLPL 187 Query: 191 ILWKLPESVGFLLRQGRLEQARAMLTQVDPQARIATDTQLVQADVKGAGAPMLHLFKQDR 250 + + LPES +L G+L++A+A+ + D + G + + LFK Sbjct: 188 LYFFLPESPQYLKISGKLDEAQAVAASYGLS--LDDDLDREHEEELGESSSLSSLFKPSF 245 Query: 251 AVGTLMIWVSFFCCLLMVYALGSWLPKLMASAGYSLGSSLSFLLALNFGGVVGAIGGGWL 310 TL IW + F LL+VY L +WLP++M A Y +G+SL FL+ LN G V+G G + Sbjct: 246 RRNTLAIWGTSFMGLLLVYGLNTWLPQIMRQADYDMGNSLGFLMVLNIGAVIGLYIAGRI 305 Query: 311 GDRFTLPKVVVSFFTVGTVAIALLGFNSPTPVLYLLIIVAGATTIGTQILLYANTAQFYP 370 D+ + K + +F ++ALL P LY ++++ G +Q+L+YA + +P Sbjct: 306 ADKNSPRKTALVWFVFSAFSLALLAVRMPLIGLYGIVLLTGIFVFSSQVLIYAFVGENHP 365 Query: 371 LAIRSTGLGWASGVGRSGAIVGPLLGGALMAAALPLKMNFLVFAIPGLVAALAMGLF-ML 429 +R+T +G+++G+GR GAI GPLLGG L++A L F FA GL+ AL L Sbjct: 366 AKMRATAMGFSAGIGRLGAISGPLLGGLLVSANLAYPWGFFAFAGVGLLGALIFSASKTL 425 Query: 430 RYRHGS 435 R+R + Sbjct: 426 RHRENA 431 >ECs3031 [GEPR] COG0477 Permeases of the major facilitator superfamily Ecs Escherichia coli O157:H7 Length = 452 Score = 211 bits (537), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 143/444 (32%), Positives = 222/444 (50%), Gaps = 6/444 (1%) Query: 5 DVSQIIDGARFTKFHWMVMCLCALLLVFDGYDLFIYGAVLPVLMKEWSLSPVQAGALGSY 64 D+ +ID A K W V+ C L+++ DG+D G + P + W L+ L Sbjct: 6 DLQALIDAAPVGKMQWRVIICCFLVVMLDGFDTAAIGFIAPDIRTHWQLTAGDLAPLFGA 65 Query: 65 ALFGMMFGAFIFGPLADRIGRKKGVAISFVLFSVSTFLSGFATSPTEFGVYRFLAGLGCG 124 L G+ GA + GPL+DR GRK+ + + LF + S F+ RFL GLG G Sbjct: 66 GLLGLTAGALLCGPLSDRFGRKRVIELCVFLFGALSLASAFSPDLQTLVFLRFLTGLGLG 125 Query: 125 GLMPNAVALMNEYAPKRLRSTLVAIMFSGYSLGGVLCAGLGIWMLPNFGWQSMFFAAAV- 183 G MPN + + +EY P R R LV +MF G++LG + ++P GW + V Sbjct: 126 GAMPNTITMTSEYLPARRRGALVTLMFCGFTLGSAFGGIVSAQLVPVIGWHGILVLGGVL 185 Query: 184 PLVLLPVILWKLPESVGFLLRQGRLEQA--RAMLTQVDPQARIATDTQLVQADVKGAGAP 241 PL+L +L LPES + +R+ +L QA ++ + + + T L+++ G+ Sbjct: 186 PLMLFVALLVVLPESPRWQVRR-QLPQAVIAKTVSAITRERYVDTHFYLIESASVTKGS- 243 Query: 242 MLHLFKQDRAVGTLMIWVSFFCCLLMVYALGSWLPKLMASAGYSLGSSLSFLLALNFGGV 301 + LF + TLM+WV FF LL++Y L SW+P L+ G L + A GG Sbjct: 244 IRQLFMGRQLPITLMLWVVFFMSLLIIYLLSSWMPTLLNHRGIDLQHASWVTAAFQIGGT 303 Query: 302 VGAIGGGWLGDRFTLPKVVVSFFTVGTVAIALLGFNSPTPVLYLLIIVAGATTI-GTQIL 360 +GA+ G L D+F +V+ + +G + I ++G + L L I I G+Q+ Sbjct: 304 LGALALGVLMDKFNPFRVLTLSYAIGAICIVMIGLSQDGLWLMALAIFGTGIGISGSQVG 363 Query: 361 LYANTAQFYPLAIRSTGLGWASGVGRSGAIVGPLLGGALMAAALPLKMNFLVFAIPGLVA 420 L A TA YP R+TG+ W++ +GR GAIVG L GG +MA F + A+P ++ Sbjct: 364 LNALTATLYPTQSRATGVSWSNAIGRCGAIVGSLSGGVMMAMNFSFDTLFFIIAVPAAIS 423 Query: 421 ALAMGLFMLRYRHGSQASHAAPAA 444 A+ + L + R + + P A Sbjct: 424 AVMLTLLITVVRQSTSVPDSLPRA 447 >Z3394 [GEPR] COG0477 Permeases of the major facilitator superfamily EcZ Escherichia coli O157:H7 EDL933 Length = 452 Score = 211 bits (536), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 142/444 (31%), Positives = 221/444 (49%), Gaps = 6/444 (1%) Query: 5 DVSQIIDGARFTKFHWMVMCLCALLLVFDGYDLFIYGAVLPVLMKEWSLSPVQAGALGSY 64 D+ +ID A K W V+ C L+++ DG+D G + P + W L+ L Sbjct: 6 DLQALIDAAPVGKMQWRVIICCFLVVMLDGFDTAAIGFIAPDIRTHWQLTAGDLSPLFGA 65 Query: 65 ALFGMMFGAFIFGPLADRIGRKKGVAISFVLFSVSTFLSGFATSPTEFGVYRFLAGLGCG 124 L + GA + GPL+DR GRK+ + + LF + S F+ RFL GLG G Sbjct: 66 GLLXLTAGALLCGPLSDRFGRKRVIELCVFLFGALSLASAFSPDLQTLVFLRFLTGLGLG 125 Query: 125 GLMPNAVALMNEYAPKRLRSTLVAIMFSGYSLGGVLCAGLGIWMLPNFGWQSMFFAAAV- 183 G MPN + + +EY P R R LV +MF G++LG + ++P GW + V Sbjct: 126 GAMPNTITMTSEYLPARRRGALVTLMFCGFTLGSAFGGIVSAQLVPVIGWHGILVLGGVL 185 Query: 184 PLVLLPVILWKLPESVGFLLRQGRLEQA--RAMLTQVDPQARIATDTQLVQADVKGAGAP 241 PL+L +L LPES + +R+ +L QA ++ + + + T L+++ G+ Sbjct: 186 PLMLFVALLVVLPESPRWQVRR-QLPQAVIAKTVSAITRERYVDTHFYLIESASVTKGS- 243 Query: 242 MLHLFKQDRAVGTLMIWVSFFCCLLMVYALGSWLPKLMASAGYSLGSSLSFLLALNFGGV 301 + LF + TLM+WV FF LL++Y L SW+P L+ G L + A GG Sbjct: 244 IRQLFMGRQLPITLMLWVVFFMSLLIIYLLSSWMPTLLNHRGIDLQHASWVTAAFQIGGT 303 Query: 302 VGAIGGGWLGDRFTLPKVVVSFFTVGTVAIALLGFNSPTPVLYLLIIVAGATTI-GTQIL 360 +GA+ G L D+F +V+ + +G + I ++G + L L I I G+Q+ Sbjct: 304 LGALALGVLMDKFNPFRVLTLSYAIGAICIVMIGLSQDGLWLMALAIFGTGIGISGSQVG 363 Query: 361 LYANTAQFYPLAIRSTGLGWASGVGRSGAIVGPLLGGALMAAALPLKMNFLVFAIPGLVA 420 L A TA YP R+TG+ W++ +GR GAIVG L GG +MA F + A+P ++ Sbjct: 364 LNALTATLYPTQSRATGVSWSNAIGRCGAIVGSLSGGVMMAMNFSFDTLFFIIAVPAAIS 423 Query: 421 ALAMGLFMLRYRHGSQASHAAPAA 444 A+ + L + R + + P A Sbjct: 424 AVMLTLLITVVRQSTSVPDSLPRA 447 >RSp0896 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 458 Score = 208 bits (529), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 140/416 (33%), Positives = 218/416 (52%), Gaps = 6/416 (1%) Query: 6 VSQIIDGARFTKFHWMVMCLCALLLVFDGYDLFIYGAVLPVLMKEWSLSPVQAGALGSYA 65 V ++IDG+R + + +V+ LC + DG+D G + P L + W L+P Q Sbjct: 12 VREVIDGSRLSAYQGLVLALCFAAAMLDGFDTAAIGYIAPALREAWHLTPPQLAPAFGAG 71 Query: 66 LFGMMFGAFIFGPLADRIGRKKGVAISFVLFSVSTFLSGFATSPTEFGVYRFLAGLGCGG 125 LFG+M G+ GP+ADR GRK + +S ++F V+T + S + RFL GLG GG Sbjct: 72 LFGLMLGSMGLGPVADRFGRKPVLLMSVLVFGVATLACAASDSLNTLVMLRFLTGLGLGG 131 Query: 126 LMPNAVALMNEYAPKRLRSTLVAIMFSGYSLGGVLCAGLGIWMLPNFGWQSMFFAAAVP- 184 MP + L EY+P+R R LV + +SG++ G L + +LP +GW+ + A V Sbjct: 132 AMPICITLSAEYSPQRHRMLLVTLSWSGFTSGLALGGLVAAEILPVYGWRGVLVAGGVTP 191 Query: 185 -LVLLPVILWKLPESVGFLLRQGRLEQA-RAMLTQVDPQARIATDTQL-VQADVKGAGAP 241 ++L + LW +PESV FL ++ + A R ++T++ T + + +GA P Sbjct: 192 LVLLPVLALW-MPESVQFLAQRPQCADALRQIVTRIAGHDHGDGVTFIGDRPAQEGAPFP 250 Query: 242 MLHLFKQDRAVGTLMIWVSFFCCLLMVYALGSWLPKLMASAGYSLGSSLSFLLALNFGGV 301 +LF A T+++W +FFC L + Y L SWLP +M G +L + + GG Sbjct: 251 GRNLFSDGMAQRTVLLWAAFFCSLFVFYLLTSWLPVVMRDQGLTLTEAARVGAMVPLGGT 310 Query: 302 VGAIGGGWLGDRFTLPKVVVSFFTVGTVAIALLGFN-SPTPVLYLLIIVAGATTIGTQIL 360 +GAI L DR P+ +++ + G +A+A +G L ++ V G G Q Sbjct: 311 IGAIALALLMDRAGSPRALIAAYFCGAIAVAAIGLAIGNVAALTAVVFVVGFGIAGAQNG 370 Query: 361 LYANTAQFYPLAIRSTGLGWASGVGRSGAIVGPLLGGALMAAALPLKMNFLVFAIP 416 + AQ YP R+TG+ WA GVGR G+I G L+GG LM ++ F + A+P Sbjct: 371 INLLAAQMYPTEARATGVSWALGVGRGGSITGSLVGGTLMTTVGSVQTLFGIIALP 426 >STM2179 [GEPR] COG0477 Permeases of the major facilitator superfamily Sty Salmonella typhimurium LT2 Length = 452 Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 151/444 (34%), Positives = 219/444 (49%), Gaps = 4/444 (0%) Query: 5 DVSQIIDGARFTKFHWMVMCLCALLLVFDGYDLFIYGAVLPVLMKEWSLSPVQAGALGSY 64 D+ +ID A K W V+ C L+++ DG+D G + P + W LS + L Sbjct: 6 DLQALIDAAPVGKMQWRVIICCFLVVMLDGFDTAAIGFIAPDIRTHWQLSASELAPLFGA 65 Query: 65 ALFGMMFGAFIFGPLADRIGRKKGVAISFVLFSVSTFLSGFATSPTEFGVYRFLAGLGCG 124 L G+ GA + GPLADR GRK+ + + LF + LS F+ + RFL GLG G Sbjct: 66 GLLGLTAGALLCGPLADRFGRKRVIELCVALFGALSLLSAFSPDIETLVLLRFLTGLGLG 125 Query: 125 GLMPNAVALMNEYAPKRLRSTLVAIMFSGYSLGGVLCAGLGIWMLPNFGWQSMF-FAAAV 183 G MPN + + +EY P R R LV +MF G++LG + + ++P GW + + Sbjct: 126 GAMPNTITMTSEYLPARRRGALVTLMFCGFTLGSAMGGIVSAQLVPLIGWHGILALGGIL 185 Query: 184 PLVLLPVILWKLPESVGFLLRQGRLEQARAMLTQVDPQARIATDTQLVQADVKG-AGAPM 242 PL+L +L+ LPES + +R+ +L QA T DTQ + A + Sbjct: 186 PLMLFFGLLFALPESPRWQVRR-QLPQAVVARTVSAITGERYHDTQFFLHETAAVAKGSI 244 Query: 243 LHLFKQDRAVGTLMIWVSFFCCLLMVYALGSWLPKLMASAGYSLGSSLSFLLALNFGGVV 302 LF + V TLM+WV FF LL++Y L SW+P L+ G L + A GG + Sbjct: 245 RQLFAGRQLVITLMLWVVFFMSLLIIYLLSSWMPTLLNHRGIDLQQASWVTAAFQVGGTL 304 Query: 303 GAIGGGWLGDRFTLPKVVVSFFTVGTVAIALLGFNSPTPVLYLLIIVAGATTI-GTQILL 361 GA+ G L DR +V+ + +G V I ++G + L L I I G+Q+ L Sbjct: 305 GALLLGVLMDRLNPFRVLAVSYALGAVCIVMIGLSENGLWLMALAIFGTGIGISGSQVGL 364 Query: 362 YANTAQFYPLAIRSTGLGWASGVGRSGAIVGPLLGGALMAAALPLKMNFLVFAIPGLVAA 421 A TA YP R+TG+ W++ +GR GAIVG L GG +MA F V AIP ++A Sbjct: 365 NALTATLYPTQSRATGVSWSNAIGRCGAIVGSLSGGMMMALNFSFDTLFFVIAIPAAISA 424 Query: 422 LAMGLFMLRYRHGSQASHAAPAAK 445 + + L + R P A Sbjct: 425 VMLTLLTVVVRLSISVPDDLPRAS 448