BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0211.p (258 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA4882 [R] COG2041 Sulfite oxidase and related enzymes Pae Pseud... 346 2e-95 RSc0620 [R] COG2041 Sulfite oxidase and related enzymes Rso Rals... 300 3e-81 mlr0879 [R] COG2041 Sulfite oxidase and related enzymes Mlo Meso... 160 2e-39 alr2944 [R] COG2041 Sulfite oxidase and related enzymes Nos Nost... 152 5e-37 BMEII0075 [R] COG2041 Sulfite oxidase and related enzymes Bme Br... 152 7e-37 MA3039 [R] COG2041 Sulfite oxidase and related enzymes Mac Metha... 103 3e-22 AGc3511 [R] COG2041 Sulfite oxidase and related enzymes Atu Agro... 90 6e-18 SSO3201 [R] COG2041 Sulfite oxidase and related enzymes Sso Sulf... 88 2e-17 SMc01281 [R] COG2041 Sulfite oxidase and related enzymes Sme Sin... 88 2e-17 Cj0379c [R] COG2041 Sulfite oxidase and related enzymes Cje Camp... 86 6e-17 >PA4882 [R] COG2041 Sulfite oxidase and related enzymes Pae Pseudomonas aeruginosa Length = 255 Score = 346 bits (888), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 158/216 (73%), Positives = 183/216 (84%) Query: 43 SMLSGCDLQDNDSVDKVLWAMSRWNDRVQALLFRSHKLAPTYAASQITHPFPFNAFYDEF 102 +MLSGC LQD DSVDKVLWAMSRWNDRVQA LF +LAPT+ SQ+ PFPFNAFY + Sbjct: 40 AMLSGCRLQDGDSVDKVLWAMSRWNDRVQAWLFSRTRLAPTFDPSQVASPFPFNAFYPAY 99 Query: 103 NAPDIDGSDWKLEVSGLVSDKRSWTLERLRALPQAGQITRHICIEGWSAIGQWSGVPLRL 162 N P+ID +++L+VSG V DKR W+LE+LR LPQA Q+T+ ICIEGWSAIGQWSGVPLR Sbjct: 100 NVPEIDLPEYRLQVSGRVRDKRPWSLEQLRRLPQASQVTQLICIEGWSAIGQWSGVPLRT 159 Query: 163 FLQAVGADLTAKYVGFKCADRYYSSLDMPTALHPQTILALDFGKEALPTQYGYPLKVRVP 222 FL+ VGAD +AKYVGFKCADRYYSSLDMP+ALHPQT+LAL+ +ALP + GYPL++R+P Sbjct: 160 FLELVGADTSAKYVGFKCADRYYSSLDMPSALHPQTLLALEMSGQALPEENGYPLRLRIP 219 Query: 223 TKLGFKNPKHVAAIFVSNQNPGGYWEDQGYNWFSGI 258 TKLGFKN KHV IFVSN NPGGYWEDQGYNWFSG+ Sbjct: 220 TKLGFKNAKHVVEIFVSNSNPGGYWEDQGYNWFSGV 255 >RSc0620 [R] COG2041 Sulfite oxidase and related enzymes Rso Ralstonia solanacearum Length = 257 Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 142/244 (58%), Positives = 181/244 (74%) Query: 14 KILLADHRPALVQVQRRFMLRSALSLGALSMLSGCDLQDNDSVDKVLWAMSRWNDRVQAL 73 K++L D L RR + A++LG L +L+GC + D SV+ L +SR+NDRVQA Sbjct: 13 KLILRDATRELSMPSRRLFGKRAITLGGLLLLTGCRITDEPSVESFLMTVSRFNDRVQAW 72 Query: 74 LFRSHKLAPTYAASQITHPFPFNAFYDEFNAPDIDGSDWKLEVSGLVSDKRSWTLERLRA 133 LF +LAPTY S++T PFPFNA+Y P++D + ++LEV GLVS K WTL+ L A Sbjct: 73 LFDPRRLAPTYPESELTRPFPFNAYYGIDEVPEVDANGFQLEVGGLVSRKTPWTLDALYA 132 Query: 134 LPQAGQITRHICIEGWSAIGQWSGVPLRLFLQAVGADLTAKYVGFKCADRYYSSLDMPTA 193 LPQ Q+TRHIC+EGWSA+G+W G FLQ VGAD+TAKYVGF+CAD YYSS+DMPTA Sbjct: 133 LPQTSQVTRHICVEGWSAVGKWGGTRFSDFLQRVGADMTAKYVGFRCADDYYSSIDMPTA 192 Query: 194 LHPQTILALDFGKEALPTQYGYPLKVRVPTKLGFKNPKHVAAIFVSNQNPGGYWEDQGYN 253 LHPQT+L + E LP +YG+P+K+R+PTKLG+KNPKH+ AIFV+N+ PGGYWEDQGYN Sbjct: 193 LHPQTLLTFTYDGERLPPKYGFPMKLRMPTKLGYKNPKHIVAIFVTNKYPGGYWEDQGYN 252 Query: 254 WFSG 257 WF G Sbjct: 253 WFGG 256 >mlr0879 [R] COG2041 Sulfite oxidase and related enzymes Mlo Mesorhizobium loti Length = 280 Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 103/264 (39%), Positives = 135/264 (51%), Gaps = 36/264 (13%) Query: 26 QVQRRFMLRSALSLGALS-MLSGCDLQDN-----DSVDKVLWAMSRWNDRVQALLFRSHK 79 Q+ RR L +A SLGA MLSGCD D+ + L + R Q LL Sbjct: 22 QISRRKFL-TAASLGASGIMLSGCDAFDSQLSIGSGLRSFLENANGLTYRAQRLLAGRDA 80 Query: 80 LAPTYAASQITHPFPFNAFYDEFNAPDIDG---------SDWKLEVSGLVSDKRSWTLER 130 LAP + + I P N APD D +DW+LEVSGLV S + E+ Sbjct: 81 LAPEFTEADIRQPQRPNGV----TAPDDDTYKGLLANNFADWRLEVSGLVEKPLSLSREQ 136 Query: 131 LRALPQAGQITRHICIEGWSAIGQWSGVPLRLFLQAVGADLTAKYVGFKCAD-------- 182 L+ +P QITRH C+EGWS I +W+G PL L L A+YV F C D Sbjct: 137 LQNMPSRTQITRHDCVEGWSCIAKWTGTPLSLVLDQAVVKPQARYVMFHCLDTIDRSLSG 196 Query: 183 --RYYSSLDMPTALHPQTILALDFGKEALPTQYGYPLKVRVPTKLGFKNPKHVAAIFVSN 240 +YY ++D+ A HPQTILA + LP + G PL+VRV +LG+K PK++ I + + Sbjct: 197 DIKYYGTIDLIDARHPQTILAYGLNGKPLPVENGAPLRVRVERQLGYKMPKYLYKIELVD 256 Query: 241 ------QNPGGYWEDQGYNWFSGI 258 GGYWED GY+W+ GI Sbjct: 257 GFANVGGGRGGYWEDNGYDWYGGI 280 >alr2944 [R] COG2041 Sulfite oxidase and related enzymes Nos Nostoc sp. PCC 7120 Length = 240 Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 89/243 (36%), Positives = 136/243 (55%), Gaps = 11/243 (4%) Query: 20 HRPALVQVQRRFMLRSALSLGALSMLSGCDLQDNDSVDKVLWAMSR-WNDRVQALLFRSH 78 H L +R+F+ S +S +L +L GC +++ ++ +S+ N +V+ L+F Sbjct: 5 HIRRLQLTRRQFLQLSGMSSVSL-LLGGCG---TPALEDLVGTVSQPLNQKVEKLIFNPQ 60 Query: 79 KLAPTYAASQITHPFPFNAFYDEF-NAPDIDGSDWKLEVSGLVSDKRSWTLERLRALPQA 137 KL P ++ S+I P + F + P ID ++L V G V+ + ++ ++ LP Sbjct: 61 KLVPEFSPSEIQ---PEGLIVNSFRSTPIIDVDKYRLIVDGEVNHPLNISMAEIQNLPLT 117 Query: 138 GQITRHICIEGWSAIGQWSGVPLRLFLQAVGADLTAKYVGFKCADRYYSSLDMPTALHPQ 197 I RH+C+EGW+AI QW GV LR + +YV FK AD YY S D+ +ALHPQ Sbjct: 118 SMIIRHVCVEGWAAIVQWGGVQLREIIALAQPKENVQYVYFKSADGYYESWDIASALHPQ 177 Query: 198 TILALDFGKEALPTQYGYPLKVRVPTKLGFKNPKHVAAIFVSNQNP--GGYWEDQGYNWF 255 T+LA + E+LP G PL++ P KLG+K K V I +++ GYWED+GY WF Sbjct: 178 TLLAYEKNGESLPIDNGAPLRLAAPIKLGYKQSKWVTQITLASHLSIFKGYWEDKGYEWF 237 Query: 256 SGI 258 +GI Sbjct: 238 AGI 240 >BMEII0075 [R] COG2041 Sulfite oxidase and related enzymes Bme Brucella melitensis Length = 262 Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 98/258 (37%), Positives = 132/258 (51%), Gaps = 30/258 (11%) Query: 28 QRRFMLRSALSLGALSMLSGCDL-----QDNDSVDKVLWAMSRWNDRVQALLFRSHKLAP 82 +RRF+ + ++ G+ +LSGCD D+++V +VL + + VQ L LA Sbjct: 8 RRRFLTFTGMA-GSAVLLSGCDAFDYLGSDDNAVRQVLEKANDLSYTVQHKLEGPGALAR 66 Query: 83 TYAASQITH-------PFPFNAFYDEFNAPDIDGSDWKLEVSGLVSDKRSWTLERLRALP 135 Y S+I P YD +D++LEV GLV S++L L +P Sbjct: 67 EYGESEIRQGQKPNGETNPSTEEYDRLRENAF--ADYRLEVHGLVEKPLSFSLNELHNMP 124 Query: 136 QAGQITRHICIEGWSAIGQWSGVPLRLFLQAVGADLTAKYVGFKCADR---------YYS 186 QITRH C+EGWS I +W+GVPL L A YV F C D +Y Sbjct: 125 ARTQITRHDCVEGWSTIAKWTGVPLGHILALAKPKAGAHYVVFHCFDEVDTPQGPDLFYG 184 Query: 187 SLDMPTALHPQTILALDFGKEALPTQYGYPLKVRVPTKLGFKNPKHVAAI-----FVSNQ 241 S+D+ A HPQTILA ALP G PL+VRV +LG+K K+V +I F + Q Sbjct: 185 SIDLIDAQHPQTILAYGLNGSALPVANGAPLRVRVERQLGYKMSKYVKSIELVSSFAAIQ 244 Query: 242 NP-GGYWEDQGYNWFSGI 258 GGYWEDQGY+W+ GI Sbjct: 245 GGRGGYWEDQGYDWYGGI 262 >MA3039 [R] COG2041 Sulfite oxidase and related enzymes Mac Methanosarcina acetivorans str.C2A Length = 219 Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 55/147 (37%), Positives = 79/147 (53%) Query: 107 IDGSDWKLEVSGLVSDKRSWTLERLRALPQAGQITRHICIEGWSAIGQWSGVPLRLFLQA 166 ID ++L+V GLV + R++T E + LPQ ++ C+EGWS +W+GV + + Sbjct: 61 IDRESYRLQVDGLVENPRNFTYEEITELPQTSKVVDLNCVEGWSFTAKWTGVKIAEIFEE 120 Query: 167 VGADLTAKYVGFKCADRYYSSLDMPTALHPQTILALDFGKEALPTQYGYPLKVRVPTKLG 226 VGA A V F AD Y +SLD L ILA LP + G+PL++ K G Sbjct: 121 VGAMENATTVIFYSADGYSTSLDKDYLLESDIILAYKLNDVTLPPERGFPLQLVAEDKYG 180 Query: 227 FKNPKHVAAIFVSNQNPGGYWEDQGYN 253 +K K + I +S+ GYWE+ GYN Sbjct: 181 YKWAKWIVKIELSDSPYRGYWEEFGYN 207 >AGc3511 [R] COG2041 Sulfite oxidase and related enzymes Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 346 Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 58/192 (30%), Positives = 86/192 (44%), Gaps = 28/192 (14%) Query: 95 FNAFYD--------EFNAPDIDGSDWKLEVSGLVSDKRSWTLERLRALPQAGQITRHICI 146 +N FY+ + N+ + W ++V GLVS + + +E L P + R C+ Sbjct: 103 YNNFYEFGVGKSDPKENSGKFKPTPWTVKVDGLVSKPQEFGIEELMKYPLEERTYRMRCV 162 Query: 147 EGWSAIGQWSGVPLRLFLQAVGADLTAKYVGFKCADR-----------------YYSSLD 189 EGWS + W G PL L V +AKYV F+ R Y L Sbjct: 163 EGWSMVIPWIGFPLSALLDKVEPLGSAKYVSFETVVRPEEMPGQSGLFQPLSWPYVEGLR 222 Query: 190 MPTALHPQTILALDFGKEALPTQYGYPLKVRVPTKLGFKNPKHVAAIFVSNQNPGGYWED 249 + A HP TILA+ E LP Q G P+++ VP K GFK K + I + + P W++ Sbjct: 223 LDEARHPLTILAVGLYGETLPNQNGAPIRLVVPWKYGFKGIKSIMRISLVEKQPETTWKN 282 Query: 250 QG---YNWFSGI 258 Y ++S + Sbjct: 283 SNAREYGFYSNV 294 >SSO3201 [R] COG2041 Sulfite oxidase and related enzymes Sso Sulfolobus solfataricus Length = 199 Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 1/156 (0%) Query: 99 YDEFNAPDIDGSDWKLEVSGLVSDKRSWTLERLRALPQAGQITRHICIEGWSAIG-QWSG 157 Y EF P+++ ++L+VSG V + S+T E L LP+ + C+ GWS +W G Sbjct: 19 YAEFGIPEVNLETYRLKVSGEVENSLSFTYEELMKLPRKEIVEDFHCVTGWSIKSVKWEG 78 Query: 158 VPLRLFLQAVGADLTAKYVGFKCADRYYSSLDMPTALHPQTILALDFGKEALPTQYGYPL 217 +P +L ++ +V F D Y S + L I+AL E LP ++G+P Sbjct: 79 IPFKLLIEMAKVKNKVNWVMFYSLDGYTSIIPFEDLLKDNVIVALFMNGEKLPLKHGFPA 138 Query: 218 KVRVPTKLGFKNPKHVAAIFVSNQNPGGYWEDQGYN 253 + +P +K+ K + I GYWE++GY+ Sbjct: 139 RPIIPHLYAWKSAKWLTEIEFIKDYVDGYWEERGYH 174 >SMc01281 [R] COG2041 Sulfite oxidase and related enzymes Sme Sinorhizobium meliloti Length = 313 Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 82/176 (46%), Gaps = 20/176 (11%) Query: 103 NAPDIDGSDWKLEVSGLVSDKRSWTLERLRALPQAGQITRHICIEGWSAIGQWSGVPLRL 162 N+ + + W ++V GLV R + LE L A P +I R C+E WS + W G PL Sbjct: 85 NSANFKPAPWTVKVDGLVGKPREFGLEELLAFPLEERIYRMRCVEAWSMVIPWIGFPLAA 144 Query: 163 FLQAVGADLTAKYVGFKCADR---------YYSSLDMP--------TALHPQTILALDFG 205 L V +AKYV F+ R Y+ L+ P A HP TIL++ Sbjct: 145 LLDRVEPLGSAKYVAFETVVRPEEMPGQSGYFQPLEWPYREGLRLDEARHPLTILSVGLY 204 Query: 206 KEALPTQYGYPLKVRVPTKLGFKNPKHVAAIFVSNQNPGGYWEDQG---YNWFSGI 258 + LP Q G P+++ VP K GFK K + I ++ P W G Y +++ + Sbjct: 205 GKTLPNQNGAPIRLVVPWKYGFKGIKSIVRISLTETPPPCTWNLAGPSEYGFYANV 260 >Cj0379c [R] COG2041 Sulfite oxidase and related enzymes Cje Campylobacter jejuni Length = 297 Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 17/162 (10%) Query: 104 APDIDGSDWKLEVSGLVSDKRSWTLERLRALPQAGQITRHICIEGWSAIGQWSGVPLRLF 163 A + + +WK+++SG + + ++E + P +I R C+E WS + W G LR Sbjct: 75 AQNFNTQNWKIDISGEIEKPLTLSMEDILKFPLEERIYRFRCVETWSMVVPWVGFELRRL 134 Query: 164 LQAVGADLTAKYVGFKC---------ADRYYSSLDMP--------TALHPQTILALDFGK 206 ++ AK+V F D + ++D P A+HP T+LA+ K Sbjct: 135 IEMAKPTSEAKFVKFTTLLDKSQFPDQDALFPTIDYPYVEGLRMDEAMHPLTLLAVGMYK 194 Query: 207 EALPTQYGYPLKVRVPTKLGFKNPKHVAAIFVSNQNPGGYWE 248 +AL Q G P+++ VP K GFK+ K + I + + P WE Sbjct: 195 KALKPQNGAPIRLVVPWKYGFKSIKSIVKIEFTKEQPKSTWE 236