BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0210.p (970 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA1600 [C] COG2010 Cytochrome c, mono- and diheme variants Pae P... 453 e-127 SMb20402 [C] COG2010 Cytochrome c, mono- and diheme variants Sme... 348 2e-95 RSc0772 [C] COG2010 Cytochrome c, mono- and diheme variants Rso ... 266 1e-70 PA4619 [C] COG2010 Cytochrome c, mono- and diheme variants Pae P... 261 6e-69 PA4571_1 [C] COG2010 Cytochrome c, mono- and diheme variants Pae... 248 7e-65 PA2266 [C] COG2010 Cytochrome c, mono- and diheme variants Pae P... 221 9e-57 SMc00086 [C] COG2010 Cytochrome c, mono- and diheme variants Sme... 189 3e-47 AGc1609 [C] COG2010 Cytochrome c, mono- and diheme variants Atu ... 187 1e-46 mlr7639 [C] COG2010 Cytochrome c, mono- and diheme variants Mlo ... 167 1e-40 PA1601 [C] COG1529 Aerobic-type carbon monoxide dehydrogenase, l... 147 9e-35 >PA1600 [C] COG2010 Cytochrome c, mono- and diheme variants Pae Pseudomonas aeruginosa Length = 433 Score = 453 bits (1166), Expect = e-127, Method: Compositional matrix adjust. Identities = 233/429 (54%), Positives = 289/429 (67%), Gaps = 18/429 (4%) Query: 545 WLGAAVAAVGATLTLAMPWRSEIAPIARPDPDLYSAATIERGRRVALAGDCAVCHTAPGG 604 W ++ A+ A + L W+ IAP+ P +SA I RG R+A GDCAVCHT GG Sbjct: 10 WASGSLVAL-AAIALGYAWQPAIAPL-EGTPGPFSAEQIARGERLAALGDCAVCHTREGG 67 Query: 605 ATNAGGHALQTPFGTVYSTNITPDEHTGIGNWSYAAFERAMREGIHRDGRHLYPAFPYTA 664 NAGG AL TPFGT+YS+N+TPD +GIG WSY AFERAMR G+ RDG +LYPAFPYTA Sbjct: 68 PRNAGGRALPTPFGTIYSSNLTPDRASGIGGWSYPAFERAMRHGVARDGSYLYPAFPYTA 127 Query: 665 FAKISEADMQSLYAYLMAQPAVASTPPANDLRFPFNLRPLLAGWNTLFHDPQVFQPDPAR 724 F + + D+++LYAYLM+QPAV S PAN L FPF+ R L+AGWN LF DP ++ +P R Sbjct: 128 FTRTRDEDLKALYAYLMSQPAVHSETPANQLPFPFDQRQLMAGWNLLFLDPGAYRDEPTR 187 Query: 725 SDLWNRGAYLVDGAGHCAACHSPRNALGAEKGGRHYLGGGTVDGWEAPALTALSKSPTPW 784 + WNRGAYL +G GHC+ACHSPRNALGAEK G + GG +GW APAL A S +P W Sbjct: 188 NQQWNRGAYLAEGLGHCSACHSPRNALGAEKSGSAHFAGGEAEGWTAPALNASSPAPIAW 247 Query: 785 TEEELFAYLRRGFSARHGIAAGPMAPVVAE-LAQLPPGDVRAIAHYLASFQSDTTTSPAA 843 +EE L+AYLR G+SA HG+A+GPMAPVV E LA+ P D+RA+AHYLAS+ AA Sbjct: 248 SEEALYAYLRHGYSAYHGVASGPMAPVVGEGLAKQPDEDLRALAHYLASYA-------AA 300 Query: 844 PVPASAAQAPSPAELRS-------RANGQRLFAGACAACHQEGTGPTLFGVKPSLRVNTN 896 P + Q + + +G RLFAGAC ACH +G GP FGV+PSL +N+N Sbjct: 301 PAGETDQQQAQRLDRQGYGRVQPPSGSGARLFAGACLACHHDGDGPRFFGVRPSLALNSN 360 Query: 897 LHSDTPDNLVHVILHGIREPANPALGYMPGFANSFSDAQMVDLLAYLRSEFAAGKPAWQG 956 +H+D+PDNL+ +IL GI PA LGYMPGF +S D Q+ L YLR F AGKPAW Sbjct: 361 VHADSPDNLLRIILDGIHSPATGDLGYMPGFRHSLDDRQVATLANYLRERF-AGKPAWPD 419 Query: 957 VEASIARSR 965 + A A R Sbjct: 420 LAAKAASLR 428 >SMb20402 [C] COG2010 Cytochrome c, mono- and diheme variants Sme Sinorhizobium meliloti Length = 462 Score = 348 bits (894), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 188/426 (44%), Positives = 246/426 (57%), Gaps = 36/426 (8%) Query: 563 WRSEIAPIARPDPDLYSAATIERGRRVALAGDCAVCHTAPGGATNAGGHALQTPFGTVYS 622 WRSEI ++A + +G ++A G+C CHT PG AGG AL TPFGT+YS Sbjct: 26 WRSEIPEDTTAAEARFAAELVAKGAQLAALGNCIACHTVPGRPAFAGGLALPTPFGTIYS 85 Query: 623 TNITPDEHTGIGNWSYAAFERAMREGIHRDGRHLYPAFPYTAFAKISEADMQSLYAYLMA 682 TNITPD TGIG WS AAFERAMREG+ R+G HLYPAFPY F ++S D ++LYA+LM Sbjct: 86 TNITPDRETGIGGWSEAAFERAMREGVDREGSHLYPAFPYEHFTRVSADDNRALYAFLMT 145 Query: 683 QPAVASTPPANDLRFPFNLRPLLAGWNTLFHDPQVFQPDPARSDLWNRGAYLVDGAGHCA 742 + AV + NDL FP RPLLAGW LF D +PDP +SD WNRG YL +G GHC Sbjct: 146 RVAVKAEALENDLPFPLKFRPLLAGWKLLFLDSGEREPDPGQSDAWNRGRYLAEGLGHCG 205 Query: 743 ACHSPRNALGAEKGGRHYLGGGTVDGWEAPALTALSKSPTPWTEEELFAYLRRGFSARHG 802 ACH+PRN GAE RH+ GGG +GW+A A+ SK+P PW E+ L YLR G+ HG Sbjct: 206 ACHTPRNPFGAEDRDRHF-GGGEAEGWQAYAINTESKAPIPWDEQSLAFYLRNGWHEFHG 264 Query: 803 IAAGPMAPVVAELAQLPPGDVRAIAHYLASFQSDTTTSPAAPVPASAAQAPSPAELRSRA 862 ++ GPMA V LA LP D+ AIA Y+ S AP P +A A+LR Sbjct: 265 VSRGPMAEVTGNLAFLPDSDIAAIATYVRSIM-------GAPTPEREQRA---AQLREAF 314 Query: 863 NGQR----------------------LFAGACAACHQEGTGPTLFGVKPSLRVNTNLHSD 900 GQR ++ ACA+CH+ G G+ + ++T +++ Sbjct: 315 EGQRPEQAADSQRSPVSASGSQPGEAIYLAACASCHEGGRRQPFGGL--NFELSTAVNAP 372 Query: 901 TPDNLVHVILHGIREPANPALGYMPGFANSFSDAQMVDLLAYLRSEFAAGKPAWQGVEAS 960 P N+V+V+L G+ A MP F + +D Q+ DLLAY+R F+ +P W G+ Sbjct: 373 NPQNIVNVVLFGLPPADGEASAVMPAFRHLLNDQQVADLLAYMRERFSE-EPPWAGLVEQ 431 Query: 961 IARSRA 966 AR+R+ Sbjct: 432 TARTRS 437 >RSc0772 [C] COG2010 Cytochrome c, mono- and diheme variants Rso Ralstonia solanacearum Length = 429 Score = 266 bits (681), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 164/398 (41%), Positives = 210/398 (52%), Gaps = 14/398 (3%) Query: 583 IERGRRVALAGDCAVCHTAPGGATNAGGHALQTP-FGTVYSTNITPDEHTGIGNWSYAAF 641 I+RG +A+AGDC CHTAPGG AGG LQ P GT+YS+NITPD TGIG W Y F Sbjct: 33 IKRGEYLAIAGDCVACHTAPGGKPFAGGLPLQIPMLGTIYSSNITPDPKTGIGKWRYEDF 92 Query: 642 ERAMREGIHRDGRHLYPAFPYTAFAKISEADMQSLYAYL-MAQPAVASTPPANDLRFPFN 700 ERA+R+G+ DG +LYPA PY ++AKI++ADM+ LYAY AV PP +R+P N Sbjct: 93 ERAVRQGVSDDGENLYPAMPYPSYAKINDADMRDLYAYFRYGVAAVQYAPPPGTIRWPLN 152 Query: 701 LRPLLAGWNTLFHDPQVFQPDPARSDLWNRGAYLVDGAGHCAACHSPRNALGAEKG---- 756 +R L WN F + P + WNRGAYL G HC CH+PR EK Sbjct: 153 MRWPLKLWNLAFLKRAPYLPKGDMTPTWNRGAYLAQGLAHCGTCHTPRGFAMQEKAMDER 212 Query: 757 GRHYLGGGTVDGWEAPALTALSKSPT-PWTEEELFAYLRRGFSARHGIAAGPMAPVVAE- 814 G+ YL G T+ GW A +T+ S W E++ YLR G G AAGPM V Sbjct: 213 GKGYLAGSTLAGWSAYNITSDPVSGIGGWKPEQIVQYLRTGSVPGIGQAAGPMGEAVQHS 272 Query: 815 LAQLPPGDVRAIAHYLASFQSDTTTSPAAP----VPASAAQAPSPAELRSRANGQRLFAG 870 +++ DVRAIA YL + + +T + A PA+ A + + + RL+ G Sbjct: 273 FSRMTERDVRAIAEYLRTVPAVSTGAQRARHGWGTPATDVIALRGKPIETTIDAARLYLG 332 Query: 871 ACAACHQEGTGPTLFGVKPSLRVNTNLHSDTPDNLVHVILHGIREPANPALGYMPGFANS 930 CA CHQ T G P L N+ + + NLV V+LHGI A MP F Sbjct: 333 NCATCHQADGRGTPDGYYPPLLHNSAVGARDTRNLVQVMLHGIERRAGDRHIGMPAFGRQ 392 Query: 931 FSDAQMVDLLAYLRSEFAAGKPAWQGVEASIARSRAMP 968 SDAQ+ L Y+ +F G PA + A R MP Sbjct: 393 LSDAQLAALANYVTRQF--GDPATPALTADEIAKRRMP 428 >PA4619 [C] COG2010 Cytochrome c, mono- and diheme variants Pae Pseudomonas aeruginosa Length = 415 Score = 261 bits (667), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 156/368 (42%), Positives = 202/368 (54%), Gaps = 19/368 (5%) Query: 583 IERGRRVALAGDCAVCHTAPGGATNAGGHALQTPFGTVYSTNITPDEHTGIGNWSYAAFE 642 ++RG +A A DC CHTA GGA AGG +Q+PFGT+Y TNITPD+ GIG +S F Sbjct: 30 VKRGEYLARAADCMACHTAEGGAPFAGGLPIQSPFGTIYGTNITPDKEHGIGAYSADEFF 89 Query: 643 RAMREGIHRDGRHLYPAFPYTAFAKISEADMQSLYAYLMAQPAVASTPPANDLRFPFNLR 702 A+ EG +DG +LYPA PYT++ I D ++YAYLMAQ +A P L FPFN+R Sbjct: 90 AALTEGKRKDGAYLYPAMPYTSYHLIEREDADAIYAYLMAQEPIARPAPQTSLSFPFNVR 149 Query: 703 PLLAGWNTLFHDPQVFQPDPARSDLWNRGAYLVDGAGHCAACHSPRNALGAEKGGRHYLG 762 LAGWN L+ QP+ RS+ W RG Y+V+ GHC CH+PRN GA + + L Sbjct: 150 MGLAGWNLLYGKSVRLQPEEGRSEAWKRGQYMVEVLGHCGECHTPRNLAGALEQDKR-LS 208 Query: 763 GGTVDGWEAPALTALSKSPTPWTEEELFAYLRRGFSARHGIAAGPMAPVVAELAQ-LPPG 821 GG ++G+ AP+L + WT+ +L ++L+ G SA+ G M PVV Q L G Sbjct: 209 GGLLNGYLAPSLLPGDLAARGWTQPDLASFLKHGMSAQ-GSMFNEMFPVVHHSTQHLDDG 267 Query: 822 DVRAIAHYLASFQSDTTTSPAAPVPASAAQAPSPAELR-SRANGQRLFAGACAACH-QEG 879 D+ A+A YL Q P PA QA A+L S G++ + CA CH EG Sbjct: 268 DLAAMATYLLGDQ---------PPPAKVVQALPEAQLNDSGKRGRQQYLNVCAGCHGGEG 318 Query: 880 TGPTLFGVKPSLRVNTNLHSDTPDNLVHVILHGIREPANPALGY---MPGFANSFSDAQM 936 G V ++ NT L P NL+ VI GI E MPGFA D Q+ Sbjct: 319 EGKPHIAV--AMNGNTTLRLQDPRNLLRVIEDGIVEQQFTGFERMQPMPGFAGKLDDEQL 376 Query: 937 VDLLAYLR 944 DLL YLR Sbjct: 377 TDLLNYLR 384 >PA4571_1 [C] COG2010 Cytochrome c, mono- and diheme variants Pae Pseudomonas aeruginosa Length = 441 Score = 248 bits (632), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 161/395 (40%), Positives = 216/395 (54%), Gaps = 29/395 (7%) Query: 567 IAPIARPDPDLYSAATIERGRRVALAGDCAVCHTAPGGATNAGGHALQTPFGTVYSTNIT 626 I P+ AA IE+GR VA GDC CHT P GA AGG L+TP GT+YSTNIT Sbjct: 17 IVPLLHASEPTTDAALIEKGRYVAQLGDCIACHTGPQGAPMAGGLELKTPMGTIYSTNIT 76 Query: 627 PDEHTGIGNWSYAAFERAMREGIHRDGRHLYPAFPYTAFAKISEADMQSLYAYLM--AQP 684 PD TGIG +S+ F+RAMR+G+ +G +LYPA PY ++AKISE DM++LYAYLM QP Sbjct: 77 PDRETGIGRYSFEEFDRAMRKGVTAEGVNLYPAMPYPSYAKISEEDMRALYAYLMHGVQP 136 Query: 685 AV-ASTPPANDLRFPFNLRPLLAGWNTLFHDPQVFQPDPARSDLWNRGAYLVDGAGHCAA 743 A+TP A + +PFN R L+ WN F D F P + NRGAYLV G GHC A Sbjct: 137 VTQANTPSA--MSWPFNQRWGLSLWNWAFLDDAPFTPSSDADPVINRGAYLVQGLGHCGA 194 Query: 744 CHSPRNALGAEK-------GGRHYLGGGTVDGWEAPALTALSKSPTPWTEEELFAYLRRG 796 CH+PR EK G+ YL G TV+ W+A +L L WT E+ L+ G Sbjct: 195 CHTPRGIAFQEKAMSEAGRSGQFYLAGETVEQWQALSLRNL------WTVEDTVQLLKTG 248 Query: 797 FSARHGIAAGPMAPVVAELAQ-LPPGDVRAIAHYLASFQSDTTTSPAAPVPASAAQAPSP 855 R +G M V+ Q D+ AIA YL S + P+P S +P Sbjct: 249 -QNRFATVSGSMTDVIHHSTQHFSDDDLLAIASYLKSLPAGKDD---LPMPDSERPLAAP 304 Query: 856 AELRSRANGQRLFAGACAACHQEGTGPTLFGVKPSLRVNTNLHSDTPDNLVHVILHGIR- 914 +L S + G +A C+ CH++ G + G+ P L N + S P L+H+ L G + Sbjct: 305 VDLYS-SRGGLGYAQFCSDCHRK-DGSGVPGMFPPLAGNPTVASANPSTLLHITLTGWKT 362 Query: 915 -EPANPALGY-MPGFANSFSDAQMVDLLAYLRSEF 947 + A + Y MPGFA D ++ ++L+++RS + Sbjct: 363 AQTATHSRVYTMPGFAQ-LEDREIAEILSFVRSSW 396 >PA2266 [C] COG2010 Cytochrome c, mono- and diheme variants Pae Pseudomonas aeruginosa Length = 439 Score = 221 bits (562), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 140/384 (36%), Positives = 200/384 (52%), Gaps = 17/384 (4%) Query: 583 IERGRRVALAGDCAVCHTAPGGATNAGGHALQTPFGTVYSTNITPDEHTGIGNWSYAAFE 642 + +G +A AGDC CHTA G AGG ++TP G VYSTNITPD TGIG++S+ F+ Sbjct: 28 VRQGEYLARAGDCVACHTARDGKPFAGGLPMETPIGAVYSTNITPDRKTGIGDYSFEDFD 87 Query: 643 RAMREGIHRDGRHLYPAFPYTAFAKISEADMQSLYAYLMAQPAVASTP-PANDLRFPFNL 701 RA+R G+ R G LYPA PY ++A++SEADM++LYAY M P A+D+ +P ++ Sbjct: 88 RAVRHGVARSGDTLYPAMPYPSYARVSEADMRALYAYFMHGVEPVEQPNKASDIPWPLSM 147 Query: 702 RPLLAGWNTLFHDPQV--FQPDPARSDLWNRGAYLVDGAGHCAACHSPR------NALGA 753 R LA W F P+V FQ + + RGAYLV+G GHC ACH+PR AL A Sbjct: 148 RWPLAFWRWTFA-PEVKDFQAAAGQDPVLARGAYLVEGLGHCGACHTPRGLGMQEKALAA 206 Query: 754 EKGGRHYLGGGTVDGWEAPALTALSKSPT-PWTEEELFAYLRRGFSARHGIAAGPMAPVV 812 G + G ++ W A +L ++ W+E +L ++LR G S R + G VV Sbjct: 207 SDGAAYLSGSAPLENWIAKSLRGDHRTGLGSWSEADLVSFLRTGRSERSAVFGGMSDVVV 266 Query: 813 AELAQLPPGDVRAIAHYLASFQSDTTTSPAAPVPASAAQAPSPAELRSRANGQRLFAGAC 872 + + D+ AIA YL S S AQA + G L+ C Sbjct: 267 HSMQYMTDADLTAIARYLKSLPPADPADQPHVYDESVAQALFHGD--DSKTGAALYVDNC 324 Query: 873 AACHQEGTGPTLFGVKPSLRVNTNLHSDTPDNLVHVILHGIREPAN---PALGYMPGFAN 929 ACH+ G V P+L N + P +LVH++L G PA P+ MP F Sbjct: 325 GACHRT-DGKGYARVFPALAGNPVVTGSDPTSLVHIVLKGGTLPATHQAPSSFTMPPFGW 383 Query: 930 SFSDAQMVDLLAYLRSEFAAGKPA 953 +D ++ D++ ++R+ + P+ Sbjct: 384 RMNDQEIADVVNFIRTSWGNQAPS 407 >SMc00086 [C] COG2010 Cytochrome c, mono- and diheme variants Sme Sinorhizobium meliloti Length = 304 Score = 189 bits (480), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 104/274 (37%), Positives = 147/274 (53%), Gaps = 16/274 (5%) Query: 575 PDLYSAATIE--------RGRRVALAGDCAVCHTAPGGATN-----AGGHALQTPFGTVY 621 PD + AA E G ++ AG C CH+APG + GG L++PFGT Y Sbjct: 29 PDRWDAAHWEGLGGPDLANGEQIFWAGGCVSCHSAPGAKDDQRLVLTGGRTLKSPFGTFY 88 Query: 622 STNITPDEHTGIGNWSYAAFERAMREGIHRDGRHLYPAFPYTAFAKISEADMQSLYAYLM 681 NI+PDE GIGNW+ A F AM G+ +DG HLYP+FPY ++ +++ D+ L+ ++ Sbjct: 89 PPNISPDETVGIGNWTLAEFGDAMTRGVGKDGEHLYPSFPYGSYIRMTAKDVNDLWGFMQ 148 Query: 682 AQPAVASTPPANDLRFPFNLRPLLAGWNTLF-HDPQVFQPDPARSDLWNRGAYLVDGAGH 740 P ++ P +DL FP+N+R L W L+ D Q + A + L RG YLV+G GH Sbjct: 149 TLPKSSNATPPHDLAFPYNVRLALGAWKLLYLSDEPRTQVNTADTKL-ARGQYLVEGPGH 207 Query: 741 CAACHSPRNALGAEKGGRHYLGGGTVDG-WEAPALTALSKSPTPWTEEELFAYLRRGFSA 799 C CH+PR+ALG + R G +G P +T SKS W+ ++ +YL GF+ Sbjct: 208 CGECHTPRDALGGFEEDRWLAGAPNPEGEGRIPDITPSSKSIGDWSASDIASYLETGFTP 267 Query: 800 RHGIAAGPMAPVVAELAQLPPGDVRAIAHYLASF 833 G M V +A+LP D AIA YL + Sbjct: 268 DFDTVGGSMVEVQKNMAELPASDRDAIAAYLKAL 301 >AGc1609 [C] COG2010 Cytochrome c, mono- and diheme variants Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 306 Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 113/301 (37%), Positives = 154/301 (51%), Gaps = 27/301 (8%) Query: 548 AAVAAVGATLTLAMPWR---SEIAPIARPDPDLYSAATIERGRRVALAGDCAVCHTAP-- 602 AA+A G + P R S + PD + G + AG CA CH AP Sbjct: 15 AAIAGYGIFAWVTAPERQAPSHWVSLGEPD--------LANGETLFWAGGCASCHAAPDA 66 Query: 603 ---GGATNAGGHALQTPFGTVYSTNITPDEHTGIGNWSYAAFERAMREGIHRDGRHLYPA 659 G T +GG AL++PFGT + NI+ D GIG W+ A F AM G+ ++G HLYP+ Sbjct: 67 KGEGLLTLSGGQALKSPFGTFHVPNISSDPQHGIGGWTLAEFGDAMTRGVAKNGEHLYPS 126 Query: 660 FPYTAFAKISEADMQSLYAYLMAQPAVASTPPANDLRFPFNLRPLLAGWNTLFHDPQVFQ 719 FPY ++A++++ D+ L+ YL PA + P ++L FPFNLR L GW L+ DP Sbjct: 127 FPYASYARMTQKDINDLFGYLKVLPASQNDAPDHELPFPFNLRMALGGWKFLYFDPAA-- 184 Query: 720 PDPARSDLWN------RGAYLVDGAGHCAACHSPRNALGAEKGGRHYLGGGTVDG-WEAP 772 P R +L N RG YLV+G GHC CH+PR+ALG + GG +G P Sbjct: 185 --PPRVELANANAELLRGQYLVEGPGHCGECHTPRDALGGFLADKWLAGGPNPEGEGRIP 242 Query: 773 ALTALSKSPTPWTEEELFAYLRRGFSARHGIAAGPMAPVVAELAQLPPGDVRAIAHYLAS 832 +T S+S W E ++ +YL GF+ G M V +A L D AIA YL + Sbjct: 243 DITPGSQSIGSWAEADIASYLETGFTPEFDSVGGSMVKVQQNMAHLTTEDRDAIAAYLKA 302 Query: 833 F 833 Sbjct: 303 I 303 >mlr7639 [C] COG2010 Cytochrome c, mono- and diheme variants Mlo Mesorhizobium loti Length = 315 Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 98/270 (36%), Positives = 131/270 (48%), Gaps = 17/270 (6%) Query: 585 RGRRVALAGDCAVCHTAPGGATNA-----GGHALQTPFGTVYSTNITPDEHTGIGNWSYA 639 +G+R+ AG C CH PG +A GG L+TPFGT NI+ D GIG WS Sbjct: 46 KGKRIFYAGGCTSCHAKPGSQGDARLQLVGGLQLKTPFGTFVPPNISQDPKDGIGAWSVE 105 Query: 640 AFERAMREGIHRDGRHLYPAFPYTAFAKISEADMQSLYAYLMAQPAVASTPPANDLRFPF 699 AM +G+ G H YPAFPY ++A++ +D+ LYA+L PAVA P N L FPF Sbjct: 106 DLANAMLKGVSPSGEHFYPAFPYASYARMKPSDIADLYAFLKTLPAVAGKAPDNSLGFPF 165 Query: 700 NLRPLLAGWNTLFHDPQVF------QPDPARSDLWNRGAYLVDGAGHCAACHSPRNALGA 753 N+R + W L+ Q +P+P + G YLV+G GHC CHSPR+ G Sbjct: 166 NIRRGIGLWKRLYLSDQPVVALADGEPEPVMA-----GRYLVEGPGHCGECHSPRDFAGG 220 Query: 754 EKGGRHYLGGGTVDGWE-APALTALSKSPTPWTEEELFAYLRRGFSARHGIAAGPMAPVV 812 K G +G P +T+ W+E ++ YL GF+ G M V Sbjct: 221 TKKSEWLAGAVAAEGSGIVPNITSGKGGLANWSEADIANYLETGFTPNFDSVGGAMVDVQ 280 Query: 813 AELAQLPPGDVRAIAHYLASFQSDTTTSPA 842 +A L P D +IA YL + PA Sbjct: 281 RNMAALTPEDRASIAAYLKAVPPHPNGYPA 310 >PA1601 [C] COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Pae Pseudomonas aeruginosa Length = 748 Score = 147 bits (372), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 158/552 (28%), Positives = 234/552 (42%), Gaps = 54/552 (9%) Query: 14 LPSLRHARLALPPVLGWQSQRYTGARLQGVDVDAALGLPGVHRLVQQRHLLAVIADSDAQ 73 LP + H R+ PP G G+ L VD + GLPG+ ++V + V+ + + Q Sbjct: 215 LPGMLHGRVVRPPYTGADVSAPLGSGLLAVDESSVAGLPGLVKVVVIGDFVGVVCEREEQ 274 Query: 74 ARQACALLKPRWST-----PADDDR---ALR--PRQAHSLYQRGKEEEGLYDLT--LEAD 121 A +A LK RW P + DR LR P++ +L+ E+ L + L A Sbjct: 275 AIRAARQLKVRWKDWQGLPPLEPDRLEDTLRRHPKKPRTLHDSPGLEQHLAGIARPLSAT 334 Query: 122 YQWQDGEATLSSPDLVALAAPSGTGMRIDLPFGNPAAIALEVAGLLALPVAQIEVRSHRA 181 Y W P ALA R+ NP + ++A LL IEV A Sbjct: 335 YVWPYQLHASIGPS-CALAEVDAQRARVWSGTQNPHDLRNDLARLLQRETGDIEVIRMEA 393 Query: 182 PADAREYRAASDVAGVAALLCQQCGEAVSLALTPA-----EAPALSTSLHLRGEFDEDGA 236 A A DV+ A LL Q G V + L E + + +RG DE G Sbjct: 394 -AGCYGRNGADDVSADAVLLAQTVGRPVRVQLMREQEHGWEPKGTAQLIEVRGGLDEQGR 452 Query: 237 LGNTTLDITQDSP-APPLAWLLTETAYALQDAAAIDGAALAPPYDWRSVHVSAAQEASVP 295 + S AP LA LLT A A + P Y + + V A A + Sbjct: 453 VAAYDFATCYPSNGAPTLALLLTGRIPATPQVADMGDRTAIPQYRYPRMRVVANDAAPIV 512 Query: 296 VAA---------TCFAQEVFLDEVAQRLGQDPVQYRLAHLPDSHGRDLIRSVAHGARWHP 346 A+ FA E ++DE+A G DP+ +R +L D LI ++ A W P Sbjct: 513 RASWMRGVSALPNVFAHESYVDELAHLAGIDPIAFRRRYLDDQRALALIDALVARAGWQP 572 Query: 347 ARQQG--QRQGGRLRGRGFAYASTIEQHAGQPVQSWSAWVAEVEYDEASGELSVTKVTAG 404 R+ G L+GRGFAYA +W+AW+ +VE + +G + V KV Sbjct: 573 RTSPNPEARRDGVLKGRGFAYARYFHSKFPGFGAAWAAWIVDVEVNPENGAVRVAKVWVA 632 Query: 405 HDVRAAGQTPAASPALAQANADRLGQQARLALAHSMHGGRGFDAWSSEAGLPSTLPSSLG 464 HD GQ Q + + + +R+ + RG + G P LG Sbjct: 633 HD---CGQMVNPDGVRHQVHGNVIQSTSRVLKEFATFDRRGVTSLEW-GGYPI-----LG 683 Query: 465 LPQSTALPTVELV-----GTPPALQNIQLNAGAAFTLPAAAAISNAVYAATGVRLRQAPF 519 P+ LP ++++ PP + AG + ++P+AAAI+NA++ ATG RLRQ PF Sbjct: 684 FPE---LPEIDVLLLDRPEQPP------MGAGESASVPSAAAIANAIFDATGARLRQVPF 734 Query: 520 SGEQIRLALNAS 531 + E++ AL ++ Sbjct: 735 TPERVLAALRSA 746