BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0044.p (442 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value NMB0176 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) ... 230 5e-60 PA5304 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) P... 228 2e-59 NMA0092 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) ... 228 2e-59 STM1803 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) ... 212 1e-54 dadA [E] COG0665 Glycine/D-amino acid oxidases (deaminating) Eco... 209 9e-54 ZdadA [E] COG0665 Glycine/D-amino acid oxidases (deaminating) Ec... 209 9e-54 ECs1684 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) ... 209 9e-54 YPO2147 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) ... 209 1e-53 RSc0926 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) ... 201 2e-51 BMEII0373 [E] COG0665 Glycine/D-amino acid oxidases (deaminating... 200 6e-51 >NMB0176 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) Nme Neisseria meningitidis MC58 Length = 418 Score = 230 bits (587), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 142/425 (33%), Positives = 220/425 (51%), Gaps = 30/425 (7%) Query: 26 QIAVIGGGLSGICSAYFLATKGYEVAVIERRAHVAEEATFGDSGLLAPGTAMPLTLPGAL 85 ++ V+G G++G+ SA++LA G+EV VI+R VA E +F ++G L+ G P PG + Sbjct: 2 KVLVLGAGVAGVSSAWYLAEAGHEVTVIDRAEGVAMETSFANAGQLSYGYTTPWAAPG-I 60 Query: 86 ATFACR--FQDEPRVLLASGADFGRRRWM-RATRAAQQHHFAQHKLILSRLSAYGQDLTQ 142 T A + F+ P +L + W+ + + H+ +K + R+S Y +++ + Sbjct: 61 PTKALKWLFKSHPPLLFRPDGSLYQIEWLWQMLQNCTAAHYQTNKERMVRISEYSREMFR 120 Query: 143 QLQAHYNMEHE-NSAGVFHLFRQSAEAARLPALQEAASQ---------CEYKQLTLDAAG 192 + +A M E G +FRQ+ E EAA Q Y++L + Sbjct: 121 RFEAQTGMNFEGRKKGTLQIFRQTKEV-------EAAKQDIAVLERYGVPYRRLKPEECA 173 Query: 193 IRALEPAFSS-EAALAGALYYPDDIAGNSVLFAKQMRNAAQALGVSFHFNSTVSSIRSEF 251 EPA + A +AG L+ P D G+ LF + + Q GV FHFN +S I Sbjct: 174 --EFEPALARVTAKIAGGLHLPADATGDCRLFTENLYKLCQEKGVRFHFNQNISRIDHN- 230 Query: 252 GGRV-TLEVQSPHLASHLTMDAVVVAAGMASAALLQPLDTSLPLRALQSYSALVPVKNPD 310 G R+ T+E ++ + DAVV A G S +L LD +LP+ ++ YS +PV N D Sbjct: 231 GLRIKTVETETGRFEA----DAVVCALGCFSRTVLAQLDLNLPIYPVKGYSLTLPVTNSD 286 Query: 311 DAPTMALYDDSYKVAMTRLGSRIRISGLLGFVPASQTLPPKALRNLLKIAGDYYPNAANY 370 AP + D+SYKVA+TR +RIR+ G+ LP K L + D +P + Sbjct: 287 GAPVSTVLDESYKVAITRFDNRIRVGGMAELSGYEIKLPEKRRETLALVVNDLFPEGGDL 346 Query: 371 NQAHFWSNSIAMMPTGLPVVGPTRQGNIFVNVGHGVTGWAASVGSARLLSDMMAGEETEI 430 +QA FWS M P P++G TR N+F+N GHG GW S+GSA+L +D+++G++TEI Sbjct: 347 SQASFWSGLRPMTPDSTPLIGRTRFDNLFLNTGHGTLGWTMSLGSAKLTADIVSGKDTEI 406 Query: 431 PTAGL 435 + L Sbjct: 407 RSDDL 411 >PA5304 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) Pae Pseudomonas aeruginosa Length = 432 Score = 228 bits (581), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 144/419 (34%), Positives = 214/419 (51%), Gaps = 18/419 (4%) Query: 26 QIAVIGGGLSGICSAYFLATKGYEVAVIERRAHVAEEATFGDSGLLAPGTAMPLTLPG-A 84 ++ V+G G+ G SAY+LA G+EV V++R+ A E +F ++G ++PG A P PG Sbjct: 2 RVLVLGSGVIGTASAYYLARAGFEVVVVDRQDGPALETSFANAGQVSPGYASPWAAPGIP 61 Query: 85 LATFACRFQDEPRVLLASGADFGRRRWM-RATRAAQQHHFAQHKLILSRLSAYGQDLTQQ 143 L + + + +D + WM + R +A +K + RLS Y +D + Sbjct: 62 LKAMKWLLEKHAPLAIKLTSDPSQYAWMLQMLRNCTAERYAVNKERMVRLSEYSRDCLDE 121 Query: 144 LQAHYNMEHE-NSAGVFHLFRQSAE----AARLPALQEAASQCEYKQLTLDAAGIRALEP 198 L+A + +E + G LFR A+ + L+ + E LD GI +EP Sbjct: 122 LRAETGIAYEGRTLGTTQLFRTQAQLDAAGKDIAVLERSGVPYE----VLDRDGIARVEP 177 Query: 199 AFSSEA-ALAGALYYPDDIAGNSVLFAKQMRNAAQALGVSFHFNSTVSSIRSEFGG-RVT 256 A + A L GAL P+D G+ LF ++ A+ LGV F F + R +F G R+ Sbjct: 178 ALAKVADKLVGALRLPNDQTGDCQLFTTRLAEMAKGLGVEFRFGQNIE--RLDFAGDRIN 235 Query: 257 LEVQSPHLASHLTMDAVVVAAGMASAALLQPLDTSLPLRALQSYSALVPVKNPDDAPTMA 316 + + L LT D V+A G S LL+PL P+ L+ YS VP+ NP+ APT Sbjct: 236 GVLVNGEL---LTADHYVLALGSYSPQLLKPLGIKAPVYPLKGYSLTVPITNPEMAPTST 292 Query: 317 LYDDSYKVAMTRLGSRIRISGLLGFVPASQTLPPKALRNLLKIAGDYYPNAANYNQAHFW 376 + D++YKVA+TR RIR+ G+ +L P+ L I D YP + +QA FW Sbjct: 293 ILDETYKVAITRFDQRIRVGGMAEIAGFDLSLNPRRRETLEMITTDLYPEGGDISQATFW 352 Query: 377 SNSIAMMPTGLPVVGPTRQGNIFVNVGHGVTGWAASVGSARLLSDMMAGEETEIPTAGL 435 + P G P+VG TR N+F+N GHG GW + GS R L+D+MA + +I T GL Sbjct: 353 TGLRPATPDGTPIVGATRYRNLFLNTGHGTLGWTMACGSGRYLADLMAKKRPQISTEGL 411 >NMA0092 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) NmA Neisseria meningitidis Z2491 Length = 418 Score = 228 bits (581), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 142/427 (33%), Positives = 221/427 (51%), Gaps = 34/427 (7%) Query: 26 QIAVIGGGLSGICSAYFLATKGYEVAVIERRAHVAEEATFGDSGLLAPGTAMPLTLPGAL 85 ++ V+G G++G+ SA++LA G+EV VI+R VA E +F ++G L+ G P PG + Sbjct: 2 KVLVLGAGVAGVSSAWYLAEAGHEVTVIDRAEGVAMETSFANAGQLSYGYTTPWAAPG-I 60 Query: 86 ATFACR--FQDEPRVLLASGADFGRRRW---MRATRAAQQHHFAQHKLILSRLSAYGQDL 140 T A + F+ P +L + W M A ++ + +++ R+S Y +++ Sbjct: 61 PTKALKWLFKSHPPLLFRPDGSLYQIEWLWQMLQHCTAARYQINKERMV--RMSEYSREM 118 Query: 141 TQQLQAHYNMEHE-NSAGVFHLFRQSAEAARLPALQEAASQ---------CEYKQLTLDA 190 ++ +A M E G +FRQ+ E EAA Q Y++L + Sbjct: 119 FRRFEAQTGMNFEGRKKGTLQIFRQTKEV-------EAAKQDIAVLERYGVPYRRLKPEE 171 Query: 191 AGIRALEPAFSS-EAALAGALYYPDDIAGNSVLFAKQMRNAAQALGVSFHFNSTVSSIRS 249 EPA + A +AG L+ P D G+ LF + + Q GV FHFN T+S I Sbjct: 172 CA--EFEPALARVTAKIAGGLHLPADATGDCRLFTENLYKLCQEKGVRFHFNQTISRIDH 229 Query: 250 EFGGRV-TLEVQSPHLASHLTMDAVVVAAGMASAALLQPLDTSLPLRALQSYSALVPVKN 308 G R+ T+E ++ + DAVV A G S +L +D +LP+ ++ YS +PV N Sbjct: 230 N-GLRIKTVETETGRFEA----DAVVCALGCFSRTVLAQVDLNLPIYPVKGYSLTLPVTN 284 Query: 309 PDDAPTMALYDDSYKVAMTRLGSRIRISGLLGFVPASQTLPPKALRNLLKIAGDYYPNAA 368 D AP + D+SYKVA+TR +RIR+ G+ + LP K L + D +P Sbjct: 285 SDGAPVSTVLDESYKVAITRFNNRIRVGGMAELSGYAIKLPEKRRETLALVVNDLFPEGG 344 Query: 369 NYNQAHFWSNSIAMMPTGLPVVGPTRQGNIFVNVGHGVTGWAASVGSARLLSDMMAGEET 428 + NQ FWS M P P++G TR N+F+N GHG GW S+GSA+L +D+++G++T Sbjct: 345 DLNQTLFWSGLRPMTPDSTPLIGRTRFDNLFLNTGHGTLGWTMSLGSAKLTADIVSGKDT 404 Query: 429 EIPTAGL 435 EI + L Sbjct: 405 EIRSDDL 411 >STM1803 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) Sty Salmonella typhimurium LT2 Length = 432 Score = 212 bits (540), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 134/418 (32%), Positives = 217/418 (51%), Gaps = 25/418 (5%) Query: 26 QIAVIGGGLSGICSAYFLATKGYEVAVIERRAHVAEEATFGDSGLLAPGTAMPLTLPGA- 84 ++ ++G G+ G+ SA++L+ G++V VI+R + A+E + ++G ++PG A P PG Sbjct: 2 RVVILGSGVVGVTSAWYLSQAGHDVTVIDRESGPAQETSAANAGQISPGYAAPWAAPGVP 61 Query: 85 LATFACRFQDE-PRVLLASGADFGRRRWM-RATRAAQQHHFAQHKLILSRLSAYGQDLTQ 142 L FQ P + G F + +WM + R H+ ++K + RL+ Y +D + Sbjct: 62 LKAIKWMFQRHAPLAVRLDGTPF-QLKWMWQMLRNCDTRHYMENKGRMVRLAEYSRDCLK 120 Query: 143 QLQAHYNMEHE-NSAGVFHLFR---QSAEAARLPALQEAASQCEYKQLTLDAAGIRALEP 198 L+A +E+E G LFR Q A R A+ E A Y+ L+++ + +EP Sbjct: 121 TLRAATGIEYEGRQGGTLQLFRTAQQYENATRDIAVLEDAG-VPYQ--LLESSRLAEVEP 177 Query: 199 AFSSEA-ALAGALYYPDDIAGNSVLFAKQMRNAAQALGVSFHFNSTVSSIRSE----FGG 253 A + A L G L P+D G+ LF +++ A+ GV+F FN+ V + E +G Sbjct: 178 ALAEVAHKLTGGLRLPNDETGDCQLFTQRLARMAEQAGVTFRFNTPVEKLLYENDQIYGV 237 Query: 254 RVTLEVQSPHLASHLTMDAVVVAAGMASAALLQPLDTSLPLRALQSYSALVPVKNPDDAP 313 + E+ + DA V+A G S A+L+ + +P+ L+ YS +P+ PD AP Sbjct: 238 KCADEI--------IKADAYVMAFGSYSTAMLKGI-VDIPVYPLKGYSLTIPIVEPDGAP 288 Query: 314 TMALYDDSYKVAMTRLGSRIRISGLLGFVPASQTLPPKALRNLLKIAGDYYPNAANYNQA 373 + D++YK+A+TR RIR+ G+ V + L L + D +P + QA Sbjct: 289 VSTILDETYKIAITRFDKRIRVGGMAEIVGFNTDLLQPRRETLEMVVRDLFPRGGHIEQA 348 Query: 374 HFWSNSIAMMPTGLPVVGPTRQGNIFVNVGHGVTGWAASVGSARLLSDMMAGEETEIP 431 FW+ M P G PVVG TR N+++N GHG GW + GS +LLSD+++G IP Sbjct: 349 TFWTGLRPMTPDGTPVVGRTRYKNLWLNTGHGTLGWTMACGSGQLLSDILSGRTPAIP 406 >dadA [E] COG0665 Glycine/D-amino acid oxidases (deaminating) Eco Escherichia coli K12 Length = 432 Score = 209 bits (532), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 136/422 (32%), Positives = 214/422 (50%), Gaps = 25/422 (5%) Query: 26 QIAVIGGGLSGICSAYFLATKGYEVAVIERRAHVAEEATFGDSGLLAPGTAMPLTLPGA- 84 ++ ++G G+ G+ SA++L G+EV VI+R A E + ++G ++PG A P PG Sbjct: 2 RVVILGSGVVGVASAWYLNQAGHEVTVIDREPGAALETSAANAGQISPGYAAPWAAPGVP 61 Query: 85 LATFACRFQDE-PRVLLASGADFGRRRWM-RATRAAQQHHFAQHKLILSRLSAYGQDLTQ 142 L FQ P + G F + +WM + R H+ ++K + RL+ Y +D + Sbjct: 62 LKAIKWMFQRHAPLAVRLDGTQF-QLKWMWQMLRNCDTSHYMENKGRMVRLAEYSRDCLK 120 Query: 143 QLQAHYNMEHE-NSAGVFHLFR---QSAEAARLPALQEAASQCEYKQLTLDAAGIRALEP 198 L+A N+++E G LFR Q A R A+ E A Y+ L+++ + +EP Sbjct: 121 ALRAETNIQYEGRQGGTLQLFRTEQQYENATRDIAVLEDAG-VPYQ--LLESSRLAEVEP 177 Query: 199 AFSSEA-ALAGALYYPDDIAGNSVLFAKQMRNAAQALGVSFHFNSTVSSIRSE----FGG 253 A + A L G L P+D G+ LF + + A+ GV F FN+ V + + +G Sbjct: 178 ALAEVAHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVKFRFNTPVDQLLCDGEQIYGV 237 Query: 254 RVTLEVQSPHLASHLTMDAVVVAAGMASAALLQPLDTSLPLRALQSYSALVPVKNPDDAP 313 + EV + DA V+A G S A+L+ + +P+ L+ YS +P+ D AP Sbjct: 238 KCGDEV--------IKADAYVMAFGSYSTAMLKGI-VDIPVYPLKGYSLTIPIAQEDGAP 288 Query: 314 TMALYDDSYKVAMTRLGSRIRISGLLGFVPASQTLPPKALRNLLKIAGDYYPNAANYNQA 373 + D++YK+A+TR +RIR+ G+ V + L L + D YP + QA Sbjct: 289 VSTILDETYKIAITRFDNRIRVGGMAEIVGFNTELLQPRRETLEMVVRDLYPRGGHVEQA 348 Query: 374 HFWSNSIAMMPTGLPVVGPTRQGNIFVNVGHGVTGWAASVGSARLLSDMMAGEETEIPTA 433 FW+ M P G PVVG TR N+++N GHG GW + GS +LLSD+++G IP Sbjct: 349 TFWTGLRPMTPDGTPVVGRTRFKNLWLNTGHGTLGWTMACGSGQLLSDLLSGRTPAIPYE 408 Query: 434 GL 435 L Sbjct: 409 DL 410 >ZdadA [E] COG0665 Glycine/D-amino acid oxidases (deaminating) EcZ Escherichia coli O157:H7 EDL933 Length = 432 Score = 209 bits (532), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 136/422 (32%), Positives = 214/422 (50%), Gaps = 25/422 (5%) Query: 26 QIAVIGGGLSGICSAYFLATKGYEVAVIERRAHVAEEATFGDSGLLAPGTAMPLTLPGA- 84 ++ ++G G+ G+ SA++L G+EV VI+R A E + ++G ++PG A P PG Sbjct: 2 RVVILGSGVVGVASAWYLNQAGHEVTVIDREPGAALETSAANAGQISPGYAAPWAAPGVP 61 Query: 85 LATFACRFQDE-PRVLLASGADFGRRRWM-RATRAAQQHHFAQHKLILSRLSAYGQDLTQ 142 L FQ P + G F + +WM + R H+ ++K + RL+ Y +D + Sbjct: 62 LKAIKWMFQRHAPLAVRLDGTQF-QLKWMWQMLRNCDTSHYMENKGRMVRLAEYSRDCLK 120 Query: 143 QLQAHYNMEHE-NSAGVFHLFR---QSAEAARLPALQEAASQCEYKQLTLDAAGIRALEP 198 L+A N+++E G LFR Q A R A+ E A Y+ L+++ + +EP Sbjct: 121 ALRAETNIQYEGRQGGTLQLFRTEQQYENATRDIAVLEDAG-VPYQ--LLESSRLAEVEP 177 Query: 199 AFSSEA-ALAGALYYPDDIAGNSVLFAKQMRNAAQALGVSFHFNSTVSSIRSE----FGG 253 A + A L G L P+D G+ LF + + A+ GV F FN+ V + + +G Sbjct: 178 ALAEVAHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVKFRFNTPVDQLLCDGEQIYGV 237 Query: 254 RVTLEVQSPHLASHLTMDAVVVAAGMASAALLQPLDTSLPLRALQSYSALVPVKNPDDAP 313 + EV + DA V+A G S A+L+ + +P+ L+ YS +P+ D AP Sbjct: 238 KCGDEV--------IKADAYVMAFGSYSTAMLKGI-VDIPVYPLKGYSLTIPIAQEDGAP 288 Query: 314 TMALYDDSYKVAMTRLGSRIRISGLLGFVPASQTLPPKALRNLLKIAGDYYPNAANYNQA 373 + D++YK+A+TR +RIR+ G+ V + L L + D YP + QA Sbjct: 289 VSTILDETYKIAITRFDNRIRVGGMAEIVGFNTELLQPRRETLEMVVRDLYPRGGHVEQA 348 Query: 374 HFWSNSIAMMPTGLPVVGPTRQGNIFVNVGHGVTGWAASVGSARLLSDMMAGEETEIPTA 433 FW+ M P G PVVG TR N+++N GHG GW + GS +LLSD+++G IP Sbjct: 349 TFWTGLRPMTPDGTPVVGRTRFKNLWLNTGHGTLGWTMACGSGQLLSDLLSGRTPAIPYE 408 Query: 434 GL 435 L Sbjct: 409 DL 410 >ECs1684 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) Ecs Escherichia coli O157:H7 Length = 432 Score = 209 bits (532), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 136/422 (32%), Positives = 214/422 (50%), Gaps = 25/422 (5%) Query: 26 QIAVIGGGLSGICSAYFLATKGYEVAVIERRAHVAEEATFGDSGLLAPGTAMPLTLPGA- 84 ++ ++G G+ G+ SA++L G+EV VI+R A E + ++G ++PG A P PG Sbjct: 2 RVVILGSGVVGVASAWYLNQAGHEVTVIDREPGAALETSAANAGQISPGYAAPWAAPGVP 61 Query: 85 LATFACRFQDE-PRVLLASGADFGRRRWM-RATRAAQQHHFAQHKLILSRLSAYGQDLTQ 142 L FQ P + G F + +WM + R H+ ++K + RL+ Y +D + Sbjct: 62 LKAIKWMFQRHAPLAVRLDGTQF-QLKWMWQMLRNCDTSHYMENKGRMVRLAEYSRDCLK 120 Query: 143 QLQAHYNMEHE-NSAGVFHLFR---QSAEAARLPALQEAASQCEYKQLTLDAAGIRALEP 198 L+A N+++E G LFR Q A R A+ E A Y+ L+++ + +EP Sbjct: 121 ALRAETNIQYEGRQGGTLQLFRTEQQYENATRDIAVLEDAG-VPYQ--LLESSRLAEVEP 177 Query: 199 AFSSEA-ALAGALYYPDDIAGNSVLFAKQMRNAAQALGVSFHFNSTVSSIRSE----FGG 253 A + A L G L P+D G+ LF + + A+ GV F FN+ V + + +G Sbjct: 178 ALAEVAHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVKFRFNTPVDQLLCDGEQIYGV 237 Query: 254 RVTLEVQSPHLASHLTMDAVVVAAGMASAALLQPLDTSLPLRALQSYSALVPVKNPDDAP 313 + EV + DA V+A G S A+L+ + +P+ L+ YS +P+ D AP Sbjct: 238 KCGDEV--------IKADAYVMAFGSYSTAMLKGI-VDIPVYPLKGYSLTIPIAQEDGAP 288 Query: 314 TMALYDDSYKVAMTRLGSRIRISGLLGFVPASQTLPPKALRNLLKIAGDYYPNAANYNQA 373 + D++YK+A+TR +RIR+ G+ V + L L + D YP + QA Sbjct: 289 VSTILDETYKIAITRFDNRIRVGGMAEIVGFNTELLQPRRETLEMVVRDLYPRGGHVEQA 348 Query: 374 HFWSNSIAMMPTGLPVVGPTRQGNIFVNVGHGVTGWAASVGSARLLSDMMAGEETEIPTA 433 FW+ M P G PVVG TR N+++N GHG GW + GS +LLSD+++G IP Sbjct: 349 TFWTGLRPMTPDGTPVVGRTRFKNLWLNTGHGTLGWTMACGSGQLLSDLLSGRTPAIPYE 408 Query: 434 GL 435 L Sbjct: 409 DL 410 >YPO2147 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) Ype Yersinia pestis Length = 434 Score = 209 bits (531), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 137/413 (33%), Positives = 216/413 (52%), Gaps = 17/413 (4%) Query: 26 QIAVIGGGLSGICSAYFLATKGYEVAVIERRAHVAEEATFGDSGLLAPGTAMPLTLPGA- 84 ++ ++G G+ G+ SA++LA +G++V VI+R+ A+E + G++G ++PG A P PG Sbjct: 2 RVVILGSGVVGVTSAWYLAKEGHDVTVIDRQDGPAQETSAGNAGQISPGYAAPWAAPGVP 61 Query: 85 LATFACRFQDE-PRVLLASGADFGRRRWM-RATRAAQQHHFAQHKLILSRLSAYGQDLTQ 142 L FQ P + G+ + RWM + R H+ +K + RL+ Y +D + Sbjct: 62 LKAIKWMFQRHAPLAIRLDGSSL-QLRWMWQMLRNCDTSHYMVNKSRMVRLAEYSRDCLK 120 Query: 143 QLQAHYNMEHE-NSAGVFHLFR---QSAEAARLPALQEAASQCEYKQLTLDAAGIRALEP 198 L+A +++E G LFR Q AA+ A+ + A Y LT A + +EP Sbjct: 121 DLRAATGIQYEGRQGGTLQLFRTEQQFDNAAKDIAVLDDAG-VPYSLLT--AEQLATVEP 177 Query: 199 AFSSEA-ALAGALYYPDDIAGNSVLFAKQMRNAAQALGVSFHFNSTVSSIRSEFGGRVTL 257 A + A L G L P+D G+ LF +++ A+ GV F FN +V + E G ++ Sbjct: 178 ALAKVAHKLTGGLRLPNDETGDCKLFTERLAKMAEQAGVKFIFNRSVDKLLVE-GDQIAG 236 Query: 258 EVQSPHLASHLTMDAVVVAAGMASAALLQPLDTSLPLRALQSYSALVPVKNPDDAPTMAL 317 + + + DA VVA G S ALL L S+P+ L+ YS +P+ +P AP + Sbjct: 237 VLCGDDI---IKADAYVVAFGAYSTALLAGL-VSIPVYPLKGYSLTIPITDPASAPFSTV 292 Query: 318 YDDSYKVAMTRLGSRIRISGLLGFVPASQTLPPKALRNLLKIAGDYYPNAANYNQAHFWS 377 D++YK+A+TR RIR+ G+ V + L P L + D YP+ + +QA FWS Sbjct: 293 LDETYKIAITRFDDRIRVGGMAEIVGFNTQLAPARRETLEMVVRDLYPHGGDISQAVFWS 352 Query: 378 NSIAMMPTGLPVVGPTRQGNIFVNVGHGVTGWAASVGSARLLSDMMAGEETEI 430 M P G P+VG T N+++N GHG GW + GS +LL+D++ G I Sbjct: 353 GLRPMTPDGTPIVGRTPLKNLYLNTGHGTLGWTMACGSGQLLADIIQGRRPAI 405 >RSc0926 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) Rso Ralstonia solanacearum Length = 429 Score = 201 bits (512), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 134/418 (32%), Positives = 213/418 (50%), Gaps = 27/418 (6%) Query: 26 QIAVIGGGLSGICSAYFLATKGYEVAVIERRAHVAEEATFGDSGLLAPGTAMPLTLPGA- 84 ++ V+G G+ G+ SAY+LA G+EV V++R A A + +F ++G ++PG A P PG Sbjct: 2 RVLVLGSGVIGVTSAYYLARAGHEVTVVDREAGPALDTSFANAGQISPGYASPWAAPGVP 61 Query: 85 LATFACRFQDEPRVLLASGADFGRRRWM-RATRAAQQHHFAQHKLILSRLSAYGQDLTQQ 143 L FQ + + + +WM + R +A++K + RL+ Y +D + Sbjct: 62 LKAIKWMFQQHAPLSIRPDGTLFQLQWMWQMLRNCNAASYAENKERMVRLAEYSRDCIRA 121 Query: 144 LQAHYNMEHE-NSAGVFHLFRQSAE---AARLPALQEAASQCEYKQLTLDAAGIRALEPA 199 L+A + +E G +FR + AA A+ E A Y+ L+ D +R+ EP Sbjct: 122 LRAETGIAYEGRQQGTLQVFRTQQQLDGAANDIAVLERAG-VPYELLSRDDL-VRS-EPG 178 Query: 200 F-SSEAALAGALYYPDDIAGNSVLFAKQMRNAAQALGVSFHFNSTVSSIRSEFGGRVTLE 258 S+ LAG L P+D G+ LF ++ A+ LGV F FNS ++S L Sbjct: 179 LASTRHKLAGGLRLPNDETGDCQLFTTRLAAMAEKLGVRFRFNSRINS----------LI 228 Query: 259 VQSPHLASHL------TMDAVVVAAGMASAALLQPLDTSLPLRALQSYSALVPVKNPDDA 312 VQ+ + L T D VVVA G S L+ L +P+ L+ +S VP+ + + + Sbjct: 229 VQNDAVRGALVDGEAMTADLVVVAMGSYSTPFLKNL-VGVPVYPLKGFSITVPMTDAERS 287 Query: 313 PTMALYDDSYKVAMTRLGSRIRISGLLGFVPASQTLPPKALRNLLKIAGDYYPNAANYNQ 372 P + D++YKVA+TR RIR+ G+ V + L P + L + D +P + ++ Sbjct: 288 PVSTVLDETYKVAITRFDDRIRVGGMAQIVGYDKRLDPGKRKTLEFVVSDLFPGGGDVSR 347 Query: 373 AHFWSNSIAMMPTGLPVVGPTRQGNIFVNVGHGVTGWAASVGSARLLSDMMAGEETEI 430 A FW+ M P G P+VGPT +++N GHG GW + GS +LLSD+++G I Sbjct: 348 ATFWTGLRPMTPDGTPIVGPTPVRGLWINTGHGTLGWTMACGSGQLLSDLVSGRSPAI 405 >BMEII0373 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) Bme Brucella melitensis Length = 416 Score = 200 bits (508), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 126/409 (30%), Positives = 202/409 (49%), Gaps = 9/409 (2%) Query: 26 QIAVIGGGLSGICSAYFLATKGYEVAVIERRAHVAEEATFGDSGLLAPGTAMPLTLPGA- 84 QI ++G G+ G+ +AY+LA G+EV VI+R A E +F ++G ++PG A P PG Sbjct: 2 QITILGSGVIGVTTAYYLAKLGHEVTVIDREEGPALETSFANAGQVSPGYASPWAAPGIP 61 Query: 85 LATFACRFQDEPRVLLASGADFGRRRWMRATRA-AQQHHFAQHKLILSRLSAYGQDLTQQ 143 L FQ ++L D + RW+ A + +K + R++ Y +D + Sbjct: 62 LKAAKWLFQKHAPLILRLTTDPVQYRWLLQMLANCTDSRYKINKTRMVRVAEYSRDCLIE 121 Query: 144 LQAHYNMEHEN-SAGVFHLFRQSAEAARLPALQEAASQCEYKQLTLDAAGIRALEPAFS- 201 L+ +E++ S G LFR+ + + E Q LD G +EPA + Sbjct: 122 LRKDTGIEYDQRSQGTLQLFREQYQLDGIGKDIEVLRQDGVPFEVLDRDGCVNVEPALAH 181 Query: 202 SEAALAGALYYPDDIAGNSVLFAKQMRNAAQALGVSFHFNSTVSSIRSEFGGRVTLEVQS 261 ++ G L P+D G+ F + A+ LGV F F + S+ GG+++ S Sbjct: 182 AKDKFVGGLRLPNDETGDCFKFTNALAKIAEGLGVKFRFGVNIKSLLMS-GGKISGVETS 240 Query: 262 PHLASHLTMDAVVVAAGMASAALLQPLDTSLPLRALQSYSALVPVKNPDDAPTMALYDDS 321 + +T + VVA G + AL++ L + P+ ++ YS P+ + AP + D+S Sbjct: 241 EGI---VTAERYVVALGSYTPALIKALGLNAPIYPVKGYSITAPIVDESRAPVSTVLDES 297 Query: 322 YKVAMTRLGSRIRISGLLGFVPASQTLPPKALRNLLKIAGDYYPNAANYNQAHFWSNSIA 381 YK+A+TRLG RIR+ G+ + LP L D +P + A FWS Sbjct: 298 YKIAITRLGDRIRVGGMAEVSGFTDDLPAARRATLDLSVTDLFP-GGDLKAATFWSGLRP 356 Query: 382 MMPTGLPVVGPTRQGNIFVNVGHGVTGWAASVGSARLLSDMMAGEETEI 430 M P P++G TR N+F+N GHG GW + GS RLL+D+++G + +I Sbjct: 357 MTPDSTPIIGGTRYDNLFINAGHGTLGWTMACGSGRLLADLISGNKADI 405