BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0039.p (87 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMc00698 [T] COG0271 Stress-induced morphogen (activity unknown)... 75 2e-14 XF2450 [T] COG0271 Stress-induced morphogen (activity unknown) X... 73 1e-13 NMA2143 [T] COG0271 Stress-induced morphogen (activity unknown) ... 67 1e-11 NMB0344 [T] COG0271 Stress-induced morphogen (activity unknown) ... 67 1e-11 PM1324 [T] COG0271 Stress-induced morphogen (activity unknown) P... 64 1e-10 BMEI0045 [T] COG0271 Stress-induced morphogen (activity unknown)... 63 1e-10 bolA [T] COG0271 Stress-induced morphogen (activity unknown) Eco... 62 2e-10 ZbolA [T] COG0271 Stress-induced morphogen (activity unknown) Ec... 62 2e-10 ECs0489 [T] COG0271 Stress-induced morphogen (activity unknown) ... 62 2e-10 CC3011 [T] COG0271 Stress-induced morphogen (activity unknown) C... 62 3e-10 >SMc00698 [T] COG0271 Stress-induced morphogen (activity unknown) Sme Sinorhizobium meliloti Length = 93 Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 2/87 (2%) Query: 2 QRITERLTATFSPQVCLVEDESAQHAGHAGAASGGG--HYRIRLVSELFEGKNRLNRHRL 59 +RI E+LT F P+ +V +ES QHAGH GGG H R+R+VS F G +R+ RHR Sbjct: 5 RRIEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVARHRA 64 Query: 60 VYDCLSDLMQQEIHALAIVALSPSEAT 86 + D L + +HALA+ +P EAT Sbjct: 65 INDLLKPELDAGLHALAVEPAAPGEAT 91 >XF2450 [T] COG0271 Stress-induced morphogen (activity unknown) Xfa Xylella fastidiosa 9a5c Length = 96 Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 51/80 (63%) Query: 1 VQRITERLTATFSPQVCLVEDESAQHAGHAGAASGGGHYRIRLVSELFEGKNRLNRHRLV 60 V++I L F+P V+DES +H GH+GA G GH+ + +V+ +F GK L RHR V Sbjct: 10 VEQIQIVLGDAFAPSRLEVKDESDRHIGHSGARDGRGHFSVLIVTPMFAGKTLLARHRAV 69 Query: 61 YDCLSDLMQQEIHALAIVAL 80 Y L +M+ +IHAL+I AL Sbjct: 70 YAALGSMMETDIHALSIQAL 89 >NMA2143 [T] COG0271 Stress-induced morphogen (activity unknown) NmA Neisseria meningitidis Z2491 Length = 92 Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/85 (49%), Positives = 49/85 (57%), Gaps = 3/85 (3%) Query: 1 VQRITERLTATFSPQVCLVEDESAQHAGHAGAASGGGHYRIRLVSELFEGKNRLNRHRLV 60 V I ERL T P V + DES H GHAG +GGGHY + +VS FEG +RLNR + V Sbjct: 4 VDLIRERLQ-TLDPLVLEIGDESHLHKGHAGN-TGGGHYAVLVVSGRFEGVSRLNRQKTV 61 Query: 61 YDCLSDLMQQE-IHALAIVALSPSE 84 L DL IHAL I A +P E Sbjct: 62 KSLLKDLFSDGIIHALGIRAAAPDE 86 >NMB0344 [T] COG0271 Stress-induced morphogen (activity unknown) Nme Neisseria meningitidis MC58 Length = 92 Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/85 (49%), Positives = 49/85 (57%), Gaps = 3/85 (3%) Query: 1 VQRITERLTATFSPQVCLVEDESAQHAGHAGAASGGGHYRIRLVSELFEGKNRLNRHRLV 60 V I ERL T P V + DES H GHAG +GGGHY + +VS FEG +RLNR + V Sbjct: 4 VDLIRERLQ-TLDPLVLEIGDESHLHKGHAGN-TGGGHYAVLVVSGRFEGVSRLNRQKTV 61 Query: 61 YDCLSDLMQQE-IHALAIVALSPSE 84 L DL IHAL I A +P E Sbjct: 62 KSLLKDLFSGGMIHALGIRAATPDE 86 >PM1324 [T] COG0271 Stress-induced morphogen (activity unknown) Pmu Pasteurella multocida Length = 103 Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 3/76 (3%) Query: 2 QRITERLTATFSPQVCLVEDESAQHAGHAGAASGGGHYRIRLVSELFEGKNRLNRHRLVY 61 Q + RLT F P +VE+ES H+ GA S H++I LVSE F+G +++ RHR +Y Sbjct: 5 QELITRLTEAFEPHFLVVENESHMHSSGRGANS---HFKIVLVSERFDGLSKVARHRQLY 61 Query: 62 DCLSDLMQQEIHALAI 77 L+D + Q IHALA+ Sbjct: 62 QFLADDLAQGIHALAL 77 >BMEI0045 [T] COG0271 Stress-induced morphogen (activity unknown) Bme Brucella melitensis Length = 102 Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 9/88 (10%) Query: 7 RLTATFSPQVCLVEDESAQHAGH---------AGAASGGGHYRIRLVSELFEGKNRLNRH 57 +LTA F+P+ V +ES HAGH +G H+RIR+V+E F G +R+ RH Sbjct: 12 KLTAAFAPEKLEVINESRLHAGHHRDGGHEDDTYDGAGETHFRIRIVAEAFTGMSRVQRH 71 Query: 58 RLVYDCLSDLMQQEIHALAIVALSPSEA 85 R + D L + ++ +HALA+ +P EA Sbjct: 72 RAINDLLKEELESGVHALALEPSAPGEA 99 >bolA [T] COG0271 Stress-induced morphogen (activity unknown) Eco Escherichia coli K12 Length = 116 Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 3/76 (3%) Query: 2 QRITERLTATFSPQVCLVEDESAQHAGHAGAASGGGHYRIRLVSELFEGKNRLNRHRLVY 61 +RI E+L A F P V DES +H AG+ S H+++ LVS+ F G+ LNRHR++Y Sbjct: 16 ERIEEKLRAAFQPVFLEVVDESYRHNVPAGSES---HFKVVLVSDRFTGERFLNRHRMIY 72 Query: 62 DCLSDLMQQEIHALAI 77 L++ + +HALA+ Sbjct: 73 STLAEELSTTVHALAL 88 >ZbolA [T] COG0271 Stress-induced morphogen (activity unknown) EcZ Escherichia coli O157:H7 EDL933 Length = 116 Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 3/76 (3%) Query: 2 QRITERLTATFSPQVCLVEDESAQHAGHAGAASGGGHYRIRLVSELFEGKNRLNRHRLVY 61 +RI E+L A F P V DES +H AG+ S H+++ LVS+ F G+ LNRHR++Y Sbjct: 16 ERIEEKLRAAFQPVFLEVVDESYRHNVPAGSES---HFKVVLVSDRFTGERFLNRHRMIY 72 Query: 62 DCLSDLMQQEIHALAI 77 L++ + +HALA+ Sbjct: 73 STLAEELSTTVHALAL 88 >ECs0489 [T] COG0271 Stress-induced morphogen (activity unknown) Ecs Escherichia coli O157:H7 Length = 116 Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 3/76 (3%) Query: 2 QRITERLTATFSPQVCLVEDESAQHAGHAGAASGGGHYRIRLVSELFEGKNRLNRHRLVY 61 +RI E+L A F P V DES +H AG+ S H+++ LVS+ F G+ LNRHR++Y Sbjct: 16 ERIEEKLRAAFQPVFLEVVDESYRHNVPAGSES---HFKVVLVSDRFTGERFLNRHRMIY 72 Query: 62 DCLSDLMQQEIHALAI 77 L++ + +HALA+ Sbjct: 73 STLAEELSTTVHALAL 88 >CC3011 [T] COG0271 Stress-induced morphogen (activity unknown) Ccr Caulobacter vibrioides Length = 91 Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 1/85 (1%) Query: 2 QRITERLTATFSPQVCLVEDESAQHAGHAG-AASGGGHYRIRLVSELFEGKNRLNRHRLV 60 + I +L A FSP + D+S +H GHAG +G H+ +R+ S+ F GK R+ R R+V Sbjct: 7 ETIRRKLEAAFSPSALELVDDSDRHHGHAGHTGAGESHFNLRIESQAFAGKTRVMRQRMV 66 Query: 61 YDCLSDLMQQEIHALAIVALSPSEA 85 L++ + +HAL+I A +P +A Sbjct: 67 MHALAEELAGPVHALSIHASAPGDA 91