BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0014.p (170 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2159 [R] COG0517 FOG Pae Pseudomonas aeruginosa 109 4e-24 BH2605 [R] COG0517 FOG Bha Bacillus halodurans 104 9e-23 PA2192 [R] COG0517 FOG Pae Pseudomonas aeruginosa 102 4e-22 BS_yhcV [R] COG0517 FOG Bsu Bacillus subtilis 92 5e-19 CAC0678 [R] COG0517 FOG Cac Clostridium acetobutylicum 89 3e-18 BS_ylbB [R] COG0517 FOG Bsu Bacillus subtilis 89 4e-18 SMb21441 [R] COG0517 FOG Sme Sinorhizobium meliloti 83 3e-16 Rv2626c [R] COG0517 FOG Mtu Mycobacterium tuberculosis H37Rv 79 7e-15 MT2701 [R] COG0517 FOG MtC Mycobacterium tuberculosis CDC1551 79 7e-15 CC2626 [R] COG0517 FOG Ccr Caulobacter vibrioides 70 2e-12 >PA2159 [R] COG0517 FOG Pae Pseudomonas aeruginosa Length = 138 Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 58/119 (48%), Positives = 82/119 (68%), Gaps = 2/119 (1%) Query: 7 IADVMTRGVHTLKPDDTVIRAAQAMEALDVGALPVCDGDQHLVGLVTDRDIVLRGVARKR 66 I+D+MTR V P ++ AA M +D GAL V +GD+ LVG++TDRDI +R VA Sbjct: 3 ISDIMTRNVQVADPQQSIREAAATMARIDSGALLVGEGDR-LVGMITDRDIAIRAVAGG- 60 Query: 67 LTETTPLTEVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMVSLGDVAA 125 L+ TPL +MS D+ +C+EDE V V +M Q+RRLPV++R+K LVG+VSLG++A+ Sbjct: 61 LSGDTPLGRIMSGDIHYCFEDEDVQHVARNMADIQMRRLPVLNREKRLVGVVSLGNIAS 119 >BH2605 [R] COG0517 FOG Bha Bacillus halodurans Length = 142 Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 63/138 (45%), Positives = 89/138 (64%), Gaps = 4/138 (2%) Query: 7 IADVMTRGVHTLKPDDTVIRAAQAMEALDVGALPVCDGDQHLVGLVTDRDIVLRGVARKR 66 I DVMT V PDD + A ME +VGA+P+C+ +Q L+G+VTDRDIV+R VA+K+ Sbjct: 4 IRDVMTTDVDYCSPDDNIFEVAVKMERDNVGAVPICEEEQ-LLGMVTDRDIVIRSVAKKK 62 Query: 67 LTETTPLTEVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMVSLGDVAAK 126 +TP+ EVMS ++ D V + M +QIRRLPV++ + LVG+ SLGD+A + Sbjct: 63 -PNSTPVKEVMSEHLVTATPDMTVQEAAKLMATKQIRRLPVVENNR-LVGICSLGDLAVR 120 Query: 127 TQNSGIAG-ALAEISLPA 143 + AG AL+EIS P+ Sbjct: 121 DSSDHQAGIALSEISEPS 138 >PA2192 [R] COG0517 FOG Pae Pseudomonas aeruginosa Length = 137 Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 56/118 (47%), Positives = 80/118 (67%), Gaps = 2/118 (1%) Query: 7 IADVMTRGVHTLKPDDTVIRAAQAMEALDVGALPVCDGDQHLVGLVTDRDIVLRGVARKR 66 + ++M+R V T+ P T+ AA M D+GAL V +G++ L G+VTDRD+ +RG+A Sbjct: 3 VREIMSREVRTVTPQTTLGEAALLMRQADIGALLVNEGER-LTGVVTDRDLAVRGLA-DG 60 Query: 67 LTETTPLTEVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMVSLGDVA 124 L P+ EVMS ++ +C+EDE VD V +M Q + RRLPVMDR K LVG+VSL ++A Sbjct: 61 LGADRPVREVMSGELRYCFEDEEVDHVTKNMAQLEKRRLPVMDRNKRLVGIVSLANIA 118 >BS_yhcV [R] COG0517 FOG Bsu Bacillus subtilis Length = 140 Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 58/136 (42%), Positives = 86/136 (63%), Gaps = 4/136 (2%) Query: 6 TIADVMTRGVHTLKPDDTVIRAAQAMEALDVGALPVCDGDQHLVGLVTDRDIVLRGVARK 65 ++ D MT V T+ P+ T+ AA M+ +VGA+PV + L G++TDRDI LR A+ Sbjct: 3 SVKDTMTTQVATVSPNQTIQEAASLMKQHNVGAIPVVEQGV-LKGMLTDRDIALRTTAQG 61 Query: 66 RLTETTPLTEVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMVSLGDVAA 125 R +T P++EVMS +++ + ++D M Q QIRRLP++D Q NLVG+V+LGD+A Sbjct: 62 RDGQT-PVSEVMSTELVSGNPNMSLEDASQLMAQHQIRRLPIVD-QNNLVGIVALGDLAV 119 Query: 126 KTQNSGIAG-ALAEIS 140 ++ AG AL IS Sbjct: 120 NQMSNESAGSALTNIS 135 >CAC0678 [R] COG0517 FOG Cac Clostridium acetobutylicum Length = 142 Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 55/140 (39%), Positives = 82/140 (58%), Gaps = 3/140 (2%) Query: 7 IADVMTRGVHTLKPDDTVIRAAQAMEALDVGALPVCDGDQHLVGLVTDRDIVLRGVARKR 66 I++VMT+ V ++ ++ + RAA+ M D+GA+PVC+ D+ ++G+VTDRDIVLR VA Sbjct: 3 ISEVMTKNVVSVSGEENIKRAAELMRDHDIGAIPVCNSDK-VIGVVTDRDIVLRTVAEGS 61 Query: 67 LTETTPLTEVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMVSLGDVAAK 126 + + +M+ + D + M ++Q+RRLPV R LVGMVSLGD A + Sbjct: 62 DASSENVRSIMTSTPVVASPDMDAREATKIMSEKQVRRLPVA-RDGKLVGMVSLGDFAVE 120 Query: 127 TQNSGIA-GALAEISLPAAP 145 A AL+ IS P P Sbjct: 121 GSTDNCAEKALSGISSPCCP 140 >BS_ylbB [R] COG0517 FOG Bsu Bacillus subtilis Length = 150 Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 58/136 (42%), Positives = 84/136 (61%), Gaps = 4/136 (2%) Query: 7 IADVMTRGVHTLKPDDTVIRAAQAMEALDVGALPVCDGD-QHLVGLVTDRDIVLRGVARK 65 I D+MT + D V AA M+ +VGA+PV D D + LVG+VTDRD+VLRG+A K Sbjct: 4 IKDLMTADLQYCTVLDNVYEAAVKMKDANVGAIPVVDEDGETLVGIVTDRDLVLRGIAIK 63 Query: 66 RLTETTPLTEVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMVSLGDVAA 125 + + +T+ M+ + ED VD+VL M Q+RR+PV + K L G+V+LGD++ Sbjct: 64 K-PNSQKITDAMTEKPVSVEEDASVDEVLHLMASHQLRRIPVT-KNKKLTGIVTLGDLSL 121 Query: 126 KTQNSGIAG-ALAEIS 140 Q + AG AL++IS Sbjct: 122 SEQTNERAGSALSDIS 137 >SMb21441 [R] COG0517 FOG Sme Sinorhizobium meliloti Length = 120 Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 3/114 (2%) Query: 31 MEALDVGALPVCDGDQHLVGLVTDRDIVLRGVARKRLTETTPLTEVMSHDVLWCYEDEPV 90 M D+G +PV D D L+G++TDRDIV+RGVA + + ++M+ DV +C++D+ V Sbjct: 1 MAENDIGFMPVGD-DDRLIGMITDRDIVVRGVA-DGMDPQARVADIMTTDVKYCFDDDEV 58 Query: 91 DDVLDDMVQRQIRRLPVMDRQKNLVGMVSLGDVAAKTQNSGIAGALAEISLPAA 144 DDV +M Q+RRLPV++ K LVG+VSL D AA+ Q L ++ P Sbjct: 59 DDVARNMGDIQVRRLPVVNHDKQLVGIVSLAD-AAREQPQMAGTGLKGVTEPGG 111 >Rv2626c [R] COG0517 FOG Mtu Mycobacterium tuberculosis H37Rv Length = 143 Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 1/139 (0%) Query: 6 TIADVMTRGVHTLKPDDTVIRAAQAMEALDVGALPVCDGDQHLVGLVTDRDIVLRGVARK 65 T D+M GV + +T+ AAQ M D+GALP+C D L G++TDRDIV++G+A Sbjct: 3 TARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAG 62 Query: 66 RLTETTPLTEVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMVSLGDVAA 125 T E+ + + + + ++L+ M + Q+RR+PV+ + LVG+V+ D+A Sbjct: 63 LDPNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISEHR-LVGIVTEADIAR 121 Query: 126 KTQNSGIAGALAEISLPAA 144 I + I P A Sbjct: 122 HLPEHAIVQFVKAICSPMA 140 >MT2701 [R] COG0517 FOG MtC Mycobacterium tuberculosis CDC1551 Length = 143 Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 1/139 (0%) Query: 6 TIADVMTRGVHTLKPDDTVIRAAQAMEALDVGALPVCDGDQHLVGLVTDRDIVLRGVARK 65 T D+M GV + +T+ AAQ M D+GALP+C D L G++TDRDIV++G+A Sbjct: 3 TARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAG 62 Query: 66 RLTETTPLTEVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMVSLGDVAA 125 T E+ + + + + ++L+ M + Q+RR+PV+ + LVG+V+ D+A Sbjct: 63 LDPNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISEHR-LVGIVTEADIAR 121 Query: 126 KTQNSGIAGALAEISLPAA 144 I + I P A Sbjct: 122 HLPEHAIVQFVKAICSPMA 140 >CC2626 [R] COG0517 FOG Ccr Caulobacter vibrioides Length = 157 Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 68/110 (61%), Gaps = 3/110 (2%) Query: 15 VHTLKPDDTVIRAAQAMEALDVGALPVCDGDQHLVGLVTDRDIVLRGVARKRLTE-TTPL 73 V T P +TV AA + VGA+ V D + +VG+V++RDIV R VA++ T P+ Sbjct: 28 VFTASPQETVGAAAALLHTRKVGAMVVVDDKEAVVGIVSERDIV-RMVAKEGAAALTKPI 86 Query: 74 TEVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMVSLGDV 123 + MS +V++ DE +D +L+ M R+IR LPV+ + L G++S+GD+ Sbjct: 87 SGCMSANVVFAQPDETIDALLERMTDRRIRHLPVVQNDR-LAGIISIGDL 135