BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0047.p (216 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGl980GM [E] COG0765 ABC-type amino acid transport system, perme... 263 3e-70 AGc2581 [E] COG0765 ABC-type amino acid transport system, permea... 249 2e-66 SMa0081 [E] COG0765 ABC-type amino acid transport system, permea... 227 1e-59 AGc2569 [E] COG0765 ABC-type amino acid transport system, permea... 222 4e-58 AGpA330 [E] COG0765 ABC-type amino acid transport system, permea... 207 2e-53 RSc2105 [E] COG0765 ABC-type amino acid transport system, permea... 200 2e-51 mlr4899 [E] COG0765 ABC-type amino acid transport system, permea... 196 3e-50 YPO3255 [E] COG0765 ABC-type amino acid transport system, permea... 196 4e-50 AGl666 [E] COG0765 ABC-type amino acid transport system, permeas... 195 7e-50 SMa0503 [E] COG0765 ABC-type amino acid transport system, permea... 169 4e-42 >AGl980GM [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 219 Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 125/212 (58%), Positives = 164/212 (77%) Query: 1 MNAFSFLHVEYLLQAAVWTVVLSLVAFVFGGVAGFVIALWRVSPNAVLRGIASGYIQVVQ 60 + F + +LL A WTV+L+++A V GG+ GF IAL R S N +LR A YIQV+Q Sbjct: 3 LRTFGWNEFGFLLTALQWTVLLTIIALVGGGIVGFFIALARTSDNKLLRIAAGTYIQVIQ 62 Query: 61 GIPLLVILFVAYFGLAIAGFKLTPLVAAGISFAIYCAAFLGEIWRGCIQAVPKTQWEASE 120 GIP+L+ILF++Y+GL++AG +L PL+AAG S IY + +L EIWRGCIQAVPK QWEASE Sbjct: 63 GIPVLMILFLSYYGLSLAGLELPPLIAAGASMTIYTSGYLAEIWRGCIQAVPKQQWEASE 122 Query: 121 CLGFNRFEQLTKVILPQAVKIATPPTVGFMVQIVKNTSLASVIGFVDLSRAGQIINNSTF 180 L R +Q VILPQA++I+ PPTVGF VQ+VKNTS+AS+IGFV+L+RAGQ+INN+TF Sbjct: 123 SLALTRAQQYRYVILPQAIRISLPPTVGFAVQVVKNTSIASIIGFVELARAGQLINNATF 182 Query: 181 QPFTVFGCVALIYFCLCFPLSALSKHFERKLN 212 QPF VF VA++YF +C+PLS LS+ ER+L+ Sbjct: 183 QPFRVFVAVAVLYFIVCYPLSQLSRWLERRLH 214 >AGc2581 [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 217 Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 116/215 (53%), Positives = 163/215 (75%) Query: 1 MNAFSFLHVEYLLQAAVWTVVLSLVAFVFGGVAGFVIALWRVSPNAVLRGIASGYIQVVQ 60 M+ F + +LL+ A W++VL+ +AF G + G A+ R+S +R +A+GYI V+Q Sbjct: 1 MSTFGWPEFLFLLRGAGWSIVLTAIAFSIGSLTGGFFAIMRLSQYGSVRNVAAGYITVIQ 60 Query: 61 GIPLLVILFVAYFGLAIAGFKLTPLVAAGISFAIYCAAFLGEIWRGCIQAVPKTQWEASE 120 IP+L+ILF++Y+GL + GF++ PL+AA +S ++Y +A+L EIWRG IQAVPK QWEAS Sbjct: 61 SIPVLMILFMSYYGLTLFGFEIPPLLAASVSLSVYVSAYLAEIWRGSIQAVPKPQWEASA 120 Query: 121 CLGFNRFEQLTKVILPQAVKIATPPTVGFMVQIVKNTSLASVIGFVDLSRAGQIINNSTF 180 L RF+Q VILPQA++++ PPTVGF+VQ+VKNTS+ SV+GFV+LSRAGQ++NN+TF Sbjct: 121 SLALTRFQQYRYVILPQALRLSLPPTVGFLVQLVKNTSIVSVVGFVELSRAGQLVNNATF 180 Query: 181 QPFTVFGCVALIYFCLCFPLSALSKHFERKLNVSH 215 +PF VF VAL+YF +CFPLS LS+H ER L+V Sbjct: 181 RPFQVFFVVALLYFAICFPLSRLSRHLERVLHVGR 215 >SMa0081 [E] COG0765 ABC-type amino acid transport system, permease component Sme Sinorhizobium meliloti Length = 218 Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 111/212 (52%), Positives = 150/212 (70%) Query: 1 MNAFSFLHVEYLLQAAVWTVVLSLVAFVFGGVAGFVIALWRVSPNAVLRGIASGYIQVVQ 60 + AF + ++ AA WT+ LS +AF G V G ++AL RVS LR A+G+I+V Q Sbjct: 2 IRAFGWNEFLVIVAAAQWTIALSAIAFAGGSVGGLLVALMRVSETRALRLFATGFIRVFQ 61 Query: 61 GIPLLVILFVAYFGLAIAGFKLTPLVAAGISFAIYCAAFLGEIWRGCIQAVPKTQWEASE 120 G PLL+ LF+ +FG+ I GF + P +AA I+ A++ +AFLGEIWRGCI+AVPK Q EA+ Sbjct: 62 GTPLLMQLFLVFFGMNIFGFAINPWIAATIALALHASAFLGEIWRGCIEAVPKGQREAAT 121 Query: 121 CLGFNRFEQLTKVILPQAVKIATPPTVGFMVQIVKNTSLASVIGFVDLSRAGQIINNSTF 180 LG F + VILPQA +IA PTVGF+VQ++K TSLAS+IGF +L+R GQIINN+TF Sbjct: 122 ALGLRYFRSMRHVILPQAARIAVAPTVGFLVQLIKGTSLASIIGFTELTRQGQIINNATF 181 Query: 181 QPFTVFGCVALIYFCLCFPLSALSKHFERKLN 212 PF VFG VA +YF LC+PLS +++ E + + Sbjct: 182 SPFLVFGTVAAVYFLLCWPLSLIARRMETRFS 213 >AGc2569 [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 219 Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 108/205 (52%), Positives = 150/205 (73%) Query: 12 LLQAAVWTVVLSLVAFVFGGVAGFVIALWRVSPNAVLRGIASGYIQVVQGIPLLVILFVA 71 LL A WTV+LSLV+F GG+ ++ R+S +R A Y+++ QG PLL+ LF+A Sbjct: 13 LLLATRWTVLLSLVSFAGGGLVALLLLFMRISRKKSMRVFARYYVELFQGTPLLMQLFIA 72 Query: 72 YFGLAIAGFKLTPLVAAGISFAIYCAAFLGEIWRGCIQAVPKTQWEASECLGFNRFEQLT 131 +FGL + G + +AAG++ ++ AAFL EIWRGC+++V K QWEAS L R +Q+ Sbjct: 73 FFGLGLVGIDVPAWLAAGLTLILWAAAFLTEIWRGCVESVAKGQWEASASLAMGRLQQMR 132 Query: 132 KVILPQAVKIATPPTVGFMVQIVKNTSLASVIGFVDLSRAGQIINNSTFQPFTVFGCVAL 191 VILPQA+++A PPTVGF VQ++K T++ S+IGFV+LS+AG ++ N+TFQPFTV+G VAL Sbjct: 133 YVILPQAMRVAIPPTVGFFVQVIKGTAVTSIIGFVELSKAGTVVTNATFQPFTVYGLVAL 192 Query: 192 IYFCLCFPLSALSKHFERKLNVSHR 216 IYF LC+PLS S+ ERKLNV+HR Sbjct: 193 IYFALCWPLSKSSQILERKLNVAHR 217 >AGpA330 [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 216 Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 105/213 (49%), Positives = 145/213 (68%), Gaps = 1/213 (0%) Query: 1 MNAFSFLHVEYLLQAAVWTVVLSLVAFVFGGVAGFVIALWRVSPNAVLRGIASGYIQVVQ 60 M FSF + +L A WT +++ +A FG G +A+ R S + VLR IAS +++++Q Sbjct: 1 MRQFSFSDLLFLATALEWTFLMAAIALAFGVPLGLALAIARTSGSTVLRVIASAFVELIQ 60 Query: 61 GIPLLVILFVAYFGLAI-AGFKLTPLVAAGISFAIYCAAFLGEIWRGCIQAVPKTQWEAS 119 GIPLL +L YFG+ + AG + +VA G ++ IY A FLG+IWRG IQAV + QWEA Sbjct: 61 GIPLLGLLMFFYFGIPVLAGKDVPTVVAVGAAYTIYTAVFLGDIWRGGIQAVRQAQWEAG 120 Query: 120 ECLGFNRFEQLTKVILPQAVKIATPPTVGFMVQIVKNTSLASVIGFVDLSRAGQIINNST 179 CLG + +Q +I PQA +IA P TVGF+VQ++KNTSLASV+G V+L+RAGQ+I+ T Sbjct: 121 ACLGLSWLQQFVHIIGPQAFRIALPATVGFLVQLIKNTSLASVVGLVELARAGQMISAGT 180 Query: 180 FQPFTVFGCVALIYFCLCFPLSALSKHFERKLN 212 FQP V+ VA IYF +CFPL+ S+ E +LN Sbjct: 181 FQPLLVYTLVAAIYFTICFPLTTWSRTLEARLN 213 >RSc2105 [E] COG0765 ABC-type amino acid transport system, permease component Rso Ralstonia solanacearum Length = 217 Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 88/187 (47%), Positives = 131/187 (70%) Query: 25 VAFVFGGVAGFVIALWRVSPNAVLRGIASGYIQVVQGIPLLVILFVAYFGLAIAGFKLTP 84 +AF GG AG + RV NA L+ ++ YIQ+ Q PLL+ +F+ +FG ++AG +++P Sbjct: 27 MAFALGGAAGLAVLFARVGRNAGLQRVSQVYIQIFQNTPLLMQMFLVFFGASMAGLEMSP 86 Query: 85 LVAAGISFAIYCAAFLGEIWRGCIQAVPKTQWEASECLGFNRFEQLTKVILPQAVKIATP 144 AA I +Y +A+L E+WRGC++A+P+ QWEAS L F+Q+ V+LPQAV+++ Sbjct: 87 WTAAAIGLTLYTSAYLAEVWRGCVEAIPRGQWEASASLAMGYFQQMRHVVLPQAVRMSIA 146 Query: 145 PTVGFMVQIVKNTSLASVIGFVDLSRAGQIINNSTFQPFTVFGCVALIYFCLCFPLSALS 204 PTVGF VQIVK T++AS+IGF DL++ G ++ N+TFQPF ++G V + Y LC+PLS + Sbjct: 147 PTVGFSVQIVKGTAVASIIGFEDLTKLGSVLANATFQPFLIYGLVGMAYLALCWPLSLCA 206 Query: 205 KHFERKL 211 H E+KL Sbjct: 207 SHLEKKL 213 >mlr4899 [E] COG0765 ABC-type amino acid transport system, permease component Mlo Mesorhizobium loti Length = 215 Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 92/202 (45%), Positives = 135/202 (66%) Query: 9 VEYLLQAAVWTVVLSLVAFVFGGVAGFVIALWRVSPNAVLRGIASGYIQVVQGIPLLVIL 68 V LL A WTV+LSL AFV G + G + +R+S + R +ASGYI + QG PLL+ L Sbjct: 10 VRNLLLATRWTVLLSLAAFVGGALVGMAVLFFRISKHKWSRRLASGYIALFQGTPLLMQL 69 Query: 69 FVAYFGLAIAGFKLTPLVAAGISFAIYCAAFLGEIWRGCIQAVPKTQWEASECLGFNRFE 128 F+ +FGL + G ++ P AA + + +A+L EIWR + A+P+ QW+A LG + + Sbjct: 70 FLMFFGLPMLGLRIEPWTAAVLGLTFFASAYLAEIWRSGVDALPRGQWDAGASLGLHYLQ 129 Query: 129 QLTKVILPQAVKIATPPTVGFMVQIVKNTSLASVIGFVDLSRAGQIINNSTFQPFTVFGC 188 +L +ILPQA I PTVGF+VQ++K+T+L S+IGF +L R INN+TF+PF V+G Sbjct: 130 ELRLIILPQAFSITRAPTVGFLVQLIKSTALTSIIGFEELVRTSNAINNATFEPFKVYGL 189 Query: 189 VALIYFCLCFPLSALSKHFERK 210 VALI+F +CFPL+ ++ E++ Sbjct: 190 VALIFFLMCFPLTQYARSLEKR 211 >YPO3255 [E] COG0765 ABC-type amino acid transport system, permease component Ype Yersinia pestis Length = 217 Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 99/209 (47%), Positives = 142/209 (67%), Gaps = 1/209 (0%) Query: 9 VEYLLQAAVWTVVLSLVAFVFGGVAGFVIALWRVSPNAVLRGIASGYIQVVQGIPLLVIL 68 + LL AA WT++LSL AF G + + L R+S + Y ++ QG PLL+ L Sbjct: 9 IRNLLLAARWTLLLSLTAFFGGTLVTLPLMLMRLSHWRWAARVVRLYTELFQGTPLLMQL 68 Query: 69 FVAYFGLAIAGFKLTPLVAAGISFAIYCAAFLGEIWRGCIQAVPKTQWEASECLGFNRFE 128 F+A+FGLA+ G ++P AA ++ ++ +AFL +IW G I A+PK QWEAS CLG + + Sbjct: 69 FLAFFGLALFGIDVSPWTAAAMALTLFTSAFLVDIWCGSIAALPKGQWEASRCLGLSFHQ 128 Query: 129 QLTKVILPQAVKIATPPTVGFMVQIVKNTSLASVIGFVDLSRAGQIINNSTFQPFTVFGC 188 L +VI PQA++IA PTVGF VQ++K T+LAS+IGFV+L++AG ++NN T+QPF VFG Sbjct: 129 TLFRVIAPQAMRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTYQPFKVFGL 188 Query: 189 VALIYFCLCFPLSALSKHFERKLN-VSHR 216 VAL YF +C+PLS S + E+K + + H Sbjct: 189 VALGYFLMCYPLSRYSHYLEKKFHAIDHH 217 >AGl666 [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 216 Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 99/206 (48%), Positives = 145/206 (70%) Query: 11 YLLQAAVWTVVLSLVAFVFGGVAGFVIALWRVSPNAVLRGIASGYIQVVQGIPLLVILFV 70 +L+Q WT+ L+L+ F+ GGV G +AL RV+ + ++ + +I V QG PLL+ LFV Sbjct: 11 FLMQGLKWTLALTLIGFIGGGVFGLCVALARVADSPAIQRASMAFIAVFQGTPLLMQLFV 70 Query: 71 AYFGLAIAGFKLTPLVAAGISFAIYCAAFLGEIWRGCIQAVPKTQWEASECLGFNRFEQL 130 Y+G+A+AG + +A I+F ++ +AFLGEIWRG IQAVPK Q EA+ LG + ++ Sbjct: 71 VYYGVALAGLNVDAWIAVAIAFTLHASAFLGEIWRGGIQAVPKGQTEAANALGLHYVSRM 130 Query: 131 TKVILPQAVKIATPPTVGFMVQIVKNTSLASVIGFVDLSRAGQIINNSTFQPFTVFGCVA 190 V+LPQA KI+ P T+GF+VQ++K TSLA+++GFV+LSRAGQI++N TF+P TVF V Sbjct: 131 KDVVLPQAFKISLPATIGFLVQLIKGTSLAAIVGFVELSRAGQIVSNQTFRPLTVFAIVG 190 Query: 191 LIYFCLCFPLSALSKHFERKLNVSHR 216 +IYF +C+PLS E++L + R Sbjct: 191 IIYFLICWPLSLWGAGVEKRLQAASR 216 >SMa0503 [E] COG0765 ABC-type amino acid transport system, permease component Sme Sinorhizobium meliloti Length = 218 Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 94/206 (45%), Positives = 144/206 (69%), Gaps = 3/206 (1%) Query: 5 SFLHVEYLLQAAVWTVVLSLVAFVFGGVAGFVIALWRVSPNAVLRGIASGYIQVVQGIPL 64 FL + Y L+ WT+ L+++AFV GG+ G V+AL R++ I + Y+QV+QG+PL Sbjct: 8 EFLFIVYALR---WTLTLTVLAFVGGGIMGIVLALLRIARIRAFSAITTFYMQVIQGLPL 64 Query: 65 LVILFVAYFGLAIAGFKLTPLVAAGISFAIYCAAFLGEIWRGCIQAVPKTQWEASECLGF 124 LV+LF+ Y+ ++ G ++ L AA I+ I +AFLG IW ++A+PK QWE+++ L Sbjct: 65 LVLLFLCYYAPSLFGIEIAALTAAAIALTINSSAFLGAIWESALRAIPKAQWESADALAL 124 Query: 125 NRFEQLTKVILPQAVKIATPPTVGFMVQIVKNTSLASVIGFVDLSRAGQIINNSTFQPFT 184 ++ L VI PQA+++A P TVGF+VQI+K TSLAS+IGF++++RAGQ+++N+TF+P Sbjct: 125 TPYKTLRFVIAPQAIRLALPSTVGFLVQIIKQTSLASIIGFIEITRAGQLVSNATFEPLK 184 Query: 185 VFGCVALIYFCLCFPLSALSKHFERK 210 F VA +YF +CFPL+ LS ER+ Sbjct: 185 AFLSVAALYFAVCFPLTQLSLWLERR 210