BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0026.0013.p         (61 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0667 [C] COG1773 Rubredoxin Rso Ralstonia solanacearum             108   2e-24
CC2495 [C] COG1773 Rubredoxin Ccr Caulobacter vibrioides               77   9e-15
PA5350 [C] COG1773 Rubredoxin Pae Pseudomonas aeruginosa               76   2e-14
Rv3250c [C] COG1773 Rubredoxin Mtu Mycobacterium tuberculosis H37Rv    75   5e-14
MT3348 [C] COG1773 Rubredoxin MtC Mycobacterium tuberculosis CDC...    75   5e-14
PA5351 [C] COG1773 Rubredoxin Pae Pseudomonas aeruginosa               73   2e-13
XF0379 [C] COG1773 Rubredoxin Xfa Xylella fastidiosa 9a5c              73   2e-13
NMB0993 [C] COG1773 Rubredoxin Nme Neisseria meningitidis MC58         71   6e-13
NMA1201 [C] COG1773 Rubredoxin NmA Neisseria meningitidis Z2491        71   6e-13
TM0659 [C] COG1773 Rubredoxin Tma Thermotoga maritima                  68   4e-12

>RSc0667 [C] COG1773 Rubredoxin Rso Ralstonia solanacearum
          Length = 60

 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 49/59 (83%), Positives = 53/59 (89%)

Query: 3  NSQTEFKTWMCLICGWIYDEEAGLPDEGIAPGTRWDDVPINWTCPECGARKEDFEMVAI 61
            Q E+KTWMCLICGWIYDEE G PD+GIAPGT+W+DVPINWTCPECGARKEDFEMV I
Sbjct: 2  EQQIEYKTWMCLICGWIYDEEQGAPDDGIAPGTKWEDVPINWTCPECGARKEDFEMVQI 60


>CC2495 [C] COG1773 Rubredoxin Ccr Caulobacter vibrioides
          Length = 59

 Score = 77.0 bits (188), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 33/58 (56%), Positives = 39/58 (67%)

Query: 4  SQTEFKTWMCLICGWIYDEEAGLPDEGIAPGTRWDDVPINWTCPECGARKEDFEMVAI 61
          S   FK W C  CG+IYDEE G P EG+APGTRW D+P  W CP CG  K DF+M+ +
Sbjct: 2  SAEPFKVWQCRTCGYIYDEEQGDPGEGLAPGTRWADIPAGWVCPLCGTPKSDFDMIEL 59


>PA5350 [C] COG1773 Rubredoxin Pae Pseudomonas aeruginosa
          Length = 55

 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 31/54 (57%), Positives = 41/54 (75%)

Query: 8  FKTWMCLICGWIYDEEAGLPDEGIAPGTRWDDVPINWTCPECGARKEDFEMVAI 61
           + W C++CG+IYDE  GLP+EGI  GTRW+D+P +W CP+CG  K DFEM+ I
Sbjct: 1  MRKWQCVVCGFIYDEALGLPEEGIPAGTRWEDIPADWVCPDCGVGKIDFEMIEI 54


>Rv3250c [C] COG1773 Rubredoxin Mtu Mycobacterium tuberculosis H37Rv
          Length = 60

 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 43/56 (76%)

Query: 6  TEFKTWMCLICGWIYDEEAGLPDEGIAPGTRWDDVPINWTCPECGARKEDFEMVAI 61
           ++K + C+ CG+ YDE  G P++GIA GTRWDD+P +W+CP+CGA K DFEMV +
Sbjct: 2  NDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAAKSDFEMVEV 57


>MT3348 [C] COG1773 Rubredoxin MtC Mycobacterium tuberculosis CDC1551
          Length = 60

 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 43/56 (76%)

Query: 6  TEFKTWMCLICGWIYDEEAGLPDEGIAPGTRWDDVPINWTCPECGARKEDFEMVAI 61
           ++K + C+ CG+ YDE  G P++GIA GTRWDD+P +W+CP+CGA K DFEMV +
Sbjct: 2  NDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAAKSDFEMVEV 57


>PA5351 [C] COG1773 Rubredoxin Pae Pseudomonas aeruginosa
          Length = 55

 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 32/54 (59%), Positives = 39/54 (72%)

Query: 8  FKTWMCLICGWIYDEEAGLPDEGIAPGTRWDDVPINWTCPECGARKEDFEMVAI 61
           K W C++CG IYDE  G P+EGI  GTRW+DVP +W CP+CG  K DFEM+ I
Sbjct: 1  MKKWQCVVCGLIYDEAKGWPEEGIEAGTRWEDVPEDWLCPDCGVGKLDFEMIEI 54


>XF0379 [C] COG1773 Rubredoxin Xfa Xylella fastidiosa 9a5c
          Length = 57

 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 31/54 (57%), Positives = 40/54 (74%)

Query: 8  FKTWMCLICGWIYDEEAGLPDEGIAPGTRWDDVPINWTCPECGARKEDFEMVAI 61
          ++TW C +CG++Y EE G P+EGIA GTRW+DV   W CP+CG  K DFEMV +
Sbjct: 3  WRTWRCTVCGFLYREEEGFPEEGIAAGTRWEDVSEEWVCPDCGIGKADFEMVIV 56


>NMB0993 [C] COG1773 Rubredoxin Nme Neisseria meningitidis MC58
          Length = 56

 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 39/50 (78%)

Query: 10 TWMCLICGWIYDEEAGLPDEGIAPGTRWDDVPINWTCPECGARKEDFEMV 59
           +MC  CGWIYDEE G P+ GIAPGT+++D+P +W CPECG  KEDF ++
Sbjct: 3  QYMCGPCGWIYDEEHGDPEHGIAPGTKFEDIPDDWKCPECGVGKEDFYLL 52


>NMA1201 [C] COG1773 Rubredoxin NmA Neisseria meningitidis Z2491
          Length = 56

 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 39/50 (78%)

Query: 10 TWMCLICGWIYDEEAGLPDEGIAPGTRWDDVPINWTCPECGARKEDFEMV 59
           +MC  CGWIYDEE G P+ GIAPGT+++D+P +W CPECG  KEDF ++
Sbjct: 3  QYMCGPCGWIYDEEHGDPEHGIAPGTKFEDIPDDWKCPECGVGKEDFYLL 52


>TM0659 [C] COG1773 Rubredoxin Tma Thermotoga maritima
          Length = 53

 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 37/52 (71%)

Query: 8  FKTWMCLICGWIYDEEAGLPDEGIAPGTRWDDVPINWTCPECGARKEDFEMV 59
           K + C +CG+IYD E G PD GI PGT ++D+P +W CP CGA KEDFE V
Sbjct: 1  MKKYRCKLCGYIYDPEQGDPDSGIEPGTPFEDLPDDWVCPLCGASKEDFEPV 52