BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0021.p (83 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3037 [J] COG0081 Ribosomal protein L1 Rso Ralstonia solanacearum 104 5e-23 STM4150 [J] COG0081 Ribosomal protein L1 Sty Salmonella typhimur... 92 3e-19 NMB0128 [J] COG0081 Ribosomal protein L1 Nme Neisseria meningiti... 89 3e-18 NMA0145 [J] COG0081 Ribosomal protein L1 NmA Neisseria meningiti... 89 3e-18 rplA [J] COG0081 Ribosomal protein L1 Eco Escherichia coli K12 88 5e-18 ZrplA [J] COG0081 Ribosomal protein L1 EcZ Escherichia coli O157... 88 5e-18 ECs4907 [J] COG0081 Ribosomal protein L1 Ecs Escherichia coli O1... 88 5e-18 YPO3750 [J] COG0081 Ribosomal protein L1 Ype Yersinia pestis 86 2e-17 VC0325 [J] COG0081 Ribosomal protein L1 Vch Vibrio cholerae 86 3e-17 HI0516 [J] COG0081 Ribosomal protein L1 Hin Haemophilus influenzae 85 3e-17 >RSc3037 [J] COG0081 Ribosomal protein L1 Rso Ralstonia solanacearum Length = 231 Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 51/66 (77%), Positives = 59/66 (89%) Query: 1 MAKVSKRVKAMKEKVDRTKAYPFDNAVSLIKEFATAKFNESIDVSVQLGVDAKKSDQVVR 60 MAK+SKRV A K KV+RTK YP D A+SL+KE A+AKF+ESIDV+VQLG+DAKKSDQVVR Sbjct: 1 MAKISKRVAANKAKVERTKFYPIDEALSLVKECASAKFDESIDVAVQLGIDAKKSDQVVR 60 Query: 61 GSVVLP 66 GSVVLP Sbjct: 61 GSVVLP 66 >STM4150 [J] COG0081 Ribosomal protein L1 Sty Salmonella typhimurium LT2 Length = 234 Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 41/66 (62%), Positives = 56/66 (84%) Query: 1 MAKVSKRVKAMKEKVDRTKAYPFDNAVSLIKEFATAKFNESIDVSVQLGVDAKKSDQVVR 60 MAK++KR++ ++EKVD TK Y + A++L+KE ATAKFNES+DV+V LG+DA+KSDQ VR Sbjct: 1 MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFNESVDVAVNLGIDARKSDQNVR 60 Query: 61 GSVVLP 66 G+ VLP Sbjct: 61 GATVLP 66 >NMB0128 [J] COG0081 Ribosomal protein L1 Nme Neisseria meningitidis MC58 Length = 231 Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 42/66 (63%), Positives = 54/66 (81%) Query: 1 MAKVSKRVKAMKEKVDRTKAYPFDNAVSLIKEFATAKFNESIDVSVQLGVDAKKSDQVVR 60 MAKVSKR+KA++ V+ K Y D A++L+K+ ATAKF+ES+DVS LGVD +KSDQV+R Sbjct: 1 MAKVSKRLKALRSSVEANKLYAIDEAIALVKKAATAKFDESVDVSFNLGVDPRKSDQVIR 60 Query: 61 GSVVLP 66 GSVVLP Sbjct: 61 GSVVLP 66 >NMA0145 [J] COG0081 Ribosomal protein L1 NmA Neisseria meningitidis Z2491 Length = 231 Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 42/66 (63%), Positives = 54/66 (81%) Query: 1 MAKVSKRVKAMKEKVDRTKAYPFDNAVSLIKEFATAKFNESIDVSVQLGVDAKKSDQVVR 60 MAKVSKR+KA++ V+ K Y D A++L+K+ ATAKF+ES+DVS LGVD +KSDQV+R Sbjct: 1 MAKVSKRLKALRSSVEANKLYAIDEAIALVKKAATAKFDESVDVSFNLGVDPRKSDQVIR 60 Query: 61 GSVVLP 66 GSVVLP Sbjct: 61 GSVVLP 66 >rplA [J] COG0081 Ribosomal protein L1 Eco Escherichia coli K12 Length = 234 Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 40/66 (60%), Positives = 55/66 (83%) Query: 1 MAKVSKRVKAMKEKVDRTKAYPFDNAVSLIKEFATAKFNESIDVSVQLGVDAKKSDQVVR 60 MAK++KR++ ++EKVD TK Y + A++L+KE ATAKF ES+DV+V LG+DA+KSDQ VR Sbjct: 1 MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDVAVNLGIDARKSDQNVR 60 Query: 61 GSVVLP 66 G+ VLP Sbjct: 61 GATVLP 66 >ZrplA [J] COG0081 Ribosomal protein L1 EcZ Escherichia coli O157:H7 EDL933 Length = 234 Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 40/66 (60%), Positives = 55/66 (83%) Query: 1 MAKVSKRVKAMKEKVDRTKAYPFDNAVSLIKEFATAKFNESIDVSVQLGVDAKKSDQVVR 60 MAK++KR++ ++EKVD TK Y + A++L+KE ATAKF ES+DV+V LG+DA+KSDQ VR Sbjct: 1 MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDVAVNLGIDARKSDQNVR 60 Query: 61 GSVVLP 66 G+ VLP Sbjct: 61 GATVLP 66 >ECs4907 [J] COG0081 Ribosomal protein L1 Ecs Escherichia coli O157:H7 Length = 234 Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 40/66 (60%), Positives = 55/66 (83%) Query: 1 MAKVSKRVKAMKEKVDRTKAYPFDNAVSLIKEFATAKFNESIDVSVQLGVDAKKSDQVVR 60 MAK++KR++ ++EKVD TK Y + A++L+KE ATAKF ES+DV+V LG+DA+KSDQ VR Sbjct: 1 MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDVAVNLGIDARKSDQNVR 60 Query: 61 GSVVLP 66 G+ VLP Sbjct: 61 GATVLP 66 >YPO3750 [J] COG0081 Ribosomal protein L1 Ype Yersinia pestis Length = 234 Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 40/66 (60%), Positives = 55/66 (83%) Query: 1 MAKVSKRVKAMKEKVDRTKAYPFDNAVSLIKEFATAKFNESIDVSVQLGVDAKKSDQVVR 60 MAK++KR++ +++KVD TK Y + AV+L+KE ATAKF ES+DV+V LG+DA+KSDQ VR Sbjct: 1 MAKLTKRMRVIRDKVDVTKQYDINEAVALLKELATAKFVESVDVAVNLGIDARKSDQNVR 60 Query: 61 GSVVLP 66 G+ VLP Sbjct: 61 GATVLP 66 >VC0325 [J] COG0081 Ribosomal protein L1 Vch Vibrio cholerae Length = 233 Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 40/66 (60%), Positives = 54/66 (81%) Query: 1 MAKVSKRVKAMKEKVDRTKAYPFDNAVSLIKEFATAKFNESIDVSVQLGVDAKKSDQVVR 60 MAK++KR++ ++ KVD TK Y + AV+L+KE ATAKF ES+DV+V LG+DA+KSDQ VR Sbjct: 1 MAKLTKRMRTIRAKVDVTKEYDINEAVALLKELATAKFVESVDVAVNLGIDARKSDQNVR 60 Query: 61 GSVVLP 66 G+ VLP Sbjct: 61 GATVLP 66 >HI0516 [J] COG0081 Ribosomal protein L1 Hin Haemophilus influenzae Length = 229 Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 39/66 (59%), Positives = 55/66 (83%) Query: 1 MAKVSKRVKAMKEKVDRTKAYPFDNAVSLIKEFATAKFNESIDVSVQLGVDAKKSDQVVR 60 MAK++K++KA+K VD TKAY + A++++K+FATAKF ES+DV+V LG+D +KSDQ VR Sbjct: 1 MAKLTKKMKAIKAGVDSTKAYEINEAIAVLKQFATAKFVESVDVAVNLGIDPRKSDQNVR 60 Query: 61 GSVVLP 66 G+ VLP Sbjct: 61 GATVLP 66