BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0020.p (108 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3038 [J] COG0080 Ribosomal protein L11 Rso Ralstonia solanace... 197 5e-51 NMA0146 [J] COG0080 Ribosomal protein L11 NmA Neisseria meningit... 185 2e-47 NMB0127 [J] COG0080 Ribosomal protein L11 Nme Neisseria meningit... 184 3e-47 XF2637 [J] COG0080 Ribosomal protein L11 Xfa Xylella fastidiosa ... 164 7e-41 PA4274 [J] COG0080 Ribosomal protein L11 Pae Pseudomonas aeruginosa 158 4e-39 rplK [J] COG0080 Ribosomal protein L11 Eco Escherichia coli K12 151 3e-37 ZrplK [J] COG0080 Ribosomal protein L11 EcZ Escherichia coli O15... 151 3e-37 STM4149 [J] COG0080 Ribosomal protein L11 Sty Salmonella typhimu... 151 3e-37 ECs4906 [J] COG0080 Ribosomal protein L11 Ecs Escherichia coli O... 151 3e-37 VC0324 [J] COG0080 Ribosomal protein L11 Vch Vibrio cholerae 147 6e-36 >RSc3038 [J] COG0080 Ribosomal protein L11 Rso Ralstonia solanacearum Length = 143 Score = 197 bits (501), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 96/108 (88%), Positives = 103/108 (95%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNAQTQG+EPGLP+PVVITAFADKSFTFVMK+PPAT+LIKKAAG+QKGS+KPHT Sbjct: 36 MEFCKAFNAQTQGMEPGLPVPVVITAFADKSFTFVMKSPPATVLIKKAAGVQKGSAKPHT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 DKVGKITR QAEEIA K DLTAADL+AAVRTIAGSARSMGITVEGL Sbjct: 96 DKVGKITRAQAEEIAKAKNADLTAADLDAAVRTIAGSARSMGITVEGL 143 >NMA0146 [J] COG0080 Ribosomal protein L11 NmA Neisseria meningitidis Z2491 Length = 144 Score = 185 bits (470), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 90/108 (83%), Positives = 100/108 (92%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNA TQG+EPGLPIPVVITAFADKSFTFVMKTPPA+IL+KKAAG+QKGSS P T Sbjct: 36 MEFCKAFNAATQGMEPGLPIPVVITAFADKSFTFVMKTPPASILLKKAAGLQKGSSNPLT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 +KVGK+TR Q EEIA K+PDLTAADL+AAVRTIAGSARSMG+ VEG+ Sbjct: 96 NKVGKLTRAQLEEIAKTKEPDLTAADLDAAVRTIAGSARSMGLDVEGV 143 >NMB0127 [J] COG0080 Ribosomal protein L11 Nme Neisseria meningitidis MC58 Length = 144 Score = 184 bits (468), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 90/108 (83%), Positives = 99/108 (91%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNA TQG+EPGLPIPVVITAFADKSFTFVMKTPPA+IL+KKAAG+QKGSS P T Sbjct: 36 MEFCKAFNAATQGMEPGLPIPVVITAFADKSFTFVMKTPPASILLKKAAGLQKGSSNPLT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 +KVGK+TR Q EEIA K PDLTAADL+AAVRTIAGSARSMG+ VEG+ Sbjct: 96 NKVGKLTRAQLEEIAKTKDPDLTAADLDAAVRTIAGSARSMGLDVEGV 143 >XF2637 [J] COG0080 Ribosomal protein L11 Xfa Xylella fastidiosa 9a5c Length = 158 Score = 164 bits (414), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 77/107 (71%), Positives = 94/107 (87%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 M+FCKAFNA TQ VE GLPIPVVITA++D++FTF+ KTPPA+IL+KK GIQ GS +P+T Sbjct: 52 MDFCKAFNAATQKVEQGLPIPVVITAYSDRTFTFITKTPPASILLKKIVGIQSGSKRPNT 111 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEG 107 +KVGK+TRKQ E+IA K+ D+TAADL+AAVRTIAGSARSMG+ VEG Sbjct: 112 EKVGKVTRKQLEDIAKTKELDMTAADLDAAVRTIAGSARSMGLVVEG 158 >PA4274 [J] COG0080 Ribosomal protein L11 Pae Pseudomonas aeruginosa Length = 143 Score = 158 bits (399), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 74/108 (68%), Positives = 91/108 (84%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNA+TQG EPGLP PV+IT ++D+SFTF K+ PA +L+KKAAGI GS++P++ Sbjct: 36 MEFCKAFNAKTQGQEPGLPTPVIITVYSDRSFTFETKSTPAAVLLKKAAGITSGSARPNS 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 KVG +TR Q EEIA K+ DLTAADL+AAVRTIAGSARSMG+ VEG+ Sbjct: 96 QKVGTVTRAQLEEIAKTKQADLTAADLDAAVRTIAGSARSMGLNVEGV 143 >rplK [J] COG0080 Ribosomal protein L11 Eco Escherichia coli K12 Length = 142 Score = 151 bits (382), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 71/106 (66%), Positives = 86/106 (81%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNA+T +E GLPIPVVIT +AD+SFTFV KTPPA +L+KKAAGI+ GS KP+ Sbjct: 36 MEFCKAFNAKTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNK 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVE 106 DKVGKI+R Q +EIA K D+T AD+EA R+I G+ARSMG+ VE Sbjct: 96 DKVGKISRAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVE 141 >ZrplK [J] COG0080 Ribosomal protein L11 EcZ Escherichia coli O157:H7 EDL933 Length = 142 Score = 151 bits (382), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 71/106 (66%), Positives = 86/106 (81%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNA+T +E GLPIPVVIT +AD+SFTFV KTPPA +L+KKAAGI+ GS KP+ Sbjct: 36 MEFCKAFNAKTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNK 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVE 106 DKVGKI+R Q +EIA K D+T AD+EA R+I G+ARSMG+ VE Sbjct: 96 DKVGKISRAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVE 141 >STM4149 [J] COG0080 Ribosomal protein L11 Sty Salmonella typhimurium LT2 Length = 142 Score = 151 bits (382), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 71/106 (66%), Positives = 86/106 (81%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNA+T +E GLPIPVVIT +AD+SFTFV KTPPA +L+KKAAGI+ GS KP+ Sbjct: 36 MEFCKAFNAKTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNK 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVE 106 DKVGKI+R Q +EIA K D+T AD+EA R+I G+ARSMG+ VE Sbjct: 96 DKVGKISRAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVE 141 >ECs4906 [J] COG0080 Ribosomal protein L11 Ecs Escherichia coli O157:H7 Length = 142 Score = 151 bits (382), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 71/106 (66%), Positives = 86/106 (81%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNA+T +E GLPIPVVIT +AD+SFTFV KTPPA +L+KKAAGI+ GS KP+ Sbjct: 36 MEFCKAFNAKTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNK 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVE 106 DKVGKI+R Q +EIA K D+T AD+EA R+I G+ARSMG+ VE Sbjct: 96 DKVGKISRAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVE 141 >VC0324 [J] COG0080 Ribosomal protein L11 Vch Vibrio cholerae Length = 142 Score = 147 bits (371), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 69/107 (64%), Positives = 88/107 (82%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNA+T+ +E GLPIPVVIT ++D+SFTF KTPPA++L+KKAAGI+ GS++P+T Sbjct: 36 MEFCKAFNARTESLEKGLPIPVVITVYSDRSFTFETKTPPASVLLKKAAGIKSGSARPNT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEG 107 KVG IT Q +EIA K D+T AD+EA R+IAG+ARSMG+ VEG Sbjct: 96 AKVGTITDAQIQEIAATKAADMTGADIEAMKRSIAGTARSMGLVVEG 142