BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0521.p (252 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3343 [E] COG0410 ABC-type branched-chain amino acid transport... 375 e-104 AGl1457 [E] COG0410 ABC-type branched-chain amino acid transport... 305 7e-83 SMc03119 [E] COG0410 ABC-type branched-chain amino acid transpor... 301 1e-81 BMEII0342 [E] COG0410 ABC-type branched-chain amino acid transpo... 294 1e-79 RSc1754 [E] COG0410 ABC-type branched-chain amino acid transport... 192 7e-49 BMEII0065 [E] COG0410 ABC-type branched-chain amino acid transpo... 181 1e-45 TM1139 [E] COG0410 ABC-type branched-chain amino acid transport ... 179 7e-45 alr2541 [E] COG0410 ABC-type branched-chain amino acid transport... 179 7e-45 PA4862 [E] COG0410 ABC-type branched-chain amino acid transport ... 177 2e-44 FN1428 [E] COG0410 ABC-type branched-chain amino acid transport ... 176 4e-44 >RSc3343 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 246 Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust. Identities = 184/241 (76%), Positives = 207/241 (85%), Gaps = 10/241 (4%) Query: 22 LQISDLQSWYGESHILHNVNLNVHQGEVVTLLGRNGAGRTTTLRSIMGLVGTRKGSIKIN 81 LQI DL +WYGESHILH V+L V++GEVVTLLGRNGAGRTTTLR+IMGLVGTRKGSI ++ Sbjct: 6 LQIKDLHAWYGESHILHGVDLTVNRGEVVTLLGRNGAGRTTTLRAIMGLVGTRKGSIVVH 65 Query: 82 -----GQETINLATHKIAHHGVGYCPEERGIFSSLSAEENLMLPPFV-----SKTDKGMS 131 G ETI L TH+IAH G+GYCPEERGIF+SLS EENL+LPP + ++ + GMS Sbjct: 66 DDAGQGVETIGLPTHRIAHCGIGYCPEERGIFASLSCEENLLLPPVLKGQVATRGNAGMS 125 Query: 132 IDEIYEMFPNLKERRNSQGTRLSGGEQQMLAVARILRTGARLLLLDEISEGLAPVIVQAL 191 + EIYEMFPNLKERRNSQGTRLSGGEQQMLAV RILRTGA LLLLDEISEGLAPVIVQAL Sbjct: 126 VAEIYEMFPNLKERRNSQGTRLSGGEQQMLAVGRILRTGANLLLLDEISEGLAPVIVQAL 185 Query: 192 ARMITTLKAKGYTIVMVEQNFRFAAPLADRFYVMEHGQIVESFASSQLEAKMQTLNELLG 251 ARMI LK +GYT+VMVEQNFRFAAPLADRFYVMEHG+IVE F ++QL+ KM L+ELLG Sbjct: 186 ARMILMLKKRGYTVVMVEQNFRFAAPLADRFYVMEHGRIVERFEAAQLQDKMPILHELLG 245 Query: 252 V 252 V Sbjct: 246 V 246 >AGl1457 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 233 Score = 305 bits (781), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 139/232 (59%), Positives = 189/232 (81%), Gaps = 2/232 (0%) Query: 21 VLQISDLQSWYGESHILHNVNLNVHQGEVVTLLGRNGAGRTTTLRSIMGLVGTRKGSIKI 80 +L++S+L+SWYGES LH V+L V +GE +T+LGRNG G+TTTLR+IMG++ RKG IK+ Sbjct: 4 MLEVSNLKSWYGESQALHGVDLTVGEGETITILGRNGVGKTTTLRTIMGIIRNRKGVIKL 63 Query: 81 NGQETINLATHKIAHHGVGYCPEERGIFSSLSAEENLMLPPFVSKTDKGMSIDEIYEMFP 140 G++ + + H+ A +G+G+ PEERGIF++LS EENLMLPP V+ GM++DEIYE+FP Sbjct: 64 GGKDMMPVPLHRTAKYGIGFVPEERGIFATLSVEENLMLPPVVA--SGGMTLDEIYELFP 121 Query: 141 NLKERRNSQGTRLSGGEQQMLAVARILRTGARLLLLDEISEGLAPVIVQALARMITTLKA 200 NL ERR S GT+LSGGEQQMLA+ARILRTG ++LLLDE +EGLAPVIVQ + ++ LK+ Sbjct: 122 NLHERRTSPGTKLSGGEQQMLAMARILRTGVKVLLLDEPTEGLAPVIVQRIGEVLQKLKS 181 Query: 201 KGYTIVMVEQNFRFAAPLADRFYVMEHGQIVESFASSQLEAKMQTLNELLGV 252 +G T+V+VEQNFRFA+ +ADRFY+M+HGQ+V +F +L A+M LN++LGV Sbjct: 182 RGMTVVLVEQNFRFASRIADRFYLMDHGQMVSNFPVGELSARMGELNKVLGV 233 >SMc03119 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Sme Sinorhizobium meliloti Length = 233 Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 135/232 (58%), Positives = 187/232 (80%), Gaps = 2/232 (0%) Query: 21 VLQISDLQSWYGESHILHNVNLNVHQGEVVTLLGRNGAGRTTTLRSIMGLVGTRKGSIKI 80 +L+++ L +WYGESH+LH V++ V +GE+VTLLGRNG G+TTTLR+IMG+V R+G I Sbjct: 4 LLKVAGLNAWYGESHVLHGVDMTVGEGEMVTLLGRNGVGKTTTLRAIMGIVRERRGEISF 63 Query: 81 NGQETINLATHKIAHHGVGYCPEERGIFSSLSAEENLMLPPFVSKTDKGMSIDEIYEMFP 140 G++ + + H++AH G+G+ PEERGIFS+L+ ENL+LPP V+K GM+IDEI+E+FP Sbjct: 64 AGEDLMRVPLHRVAHRGLGFVPEERGIFSTLTVYENLLLPPAVAKG--GMTIDEIFELFP 121 Query: 141 NLKERRNSQGTRLSGGEQQMLAVARILRTGARLLLLDEISEGLAPVIVQALARMITTLKA 200 NL ERRNS GT+LSGGEQQMLA+ARILRTG R++LLDE +EGLAPVIVQ + ++ LK Sbjct: 122 NLHERRNSAGTKLSGGEQQMLAIARILRTGVRMMLLDEPTEGLAPVIVQRIGEVLKKLKE 181 Query: 201 KGYTIVMVEQNFRFAAPLADRFYVMEHGQIVESFASSQLEAKMQTLNELLGV 252 +G T+++VEQNFRFA+ +ADRFY+M+HG++ F S+L +M L+++LGV Sbjct: 182 RGMTVLLVEQNFRFASKVADRFYLMDHGRVAGEFPVSELSGRMDMLHDVLGV 233 >BMEII0342 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 274 Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 133/235 (56%), Positives = 185/235 (78%), Gaps = 3/235 (1%) Query: 21 VLQISDLQSWYGESHILHNVNLNVHQGEVVTLLGRNGAGRTTTLRSIMGLVGTRKGSIKI 80 +L + L +WYGESH L V+L++ GE +TLLGRNG G+TTTLR+IMG++ R G+I + Sbjct: 40 LLSVRGLYAWYGESHALQGVDLDIWPGETITLLGRNGVGKTTTLRAIMGIIRKRTGTITL 99 Query: 81 NGQETINLATHKIAHHGVGYCPEERGIFSSLSAEENLMLPPFVSK---TDKGMSIDEIYE 137 +G++ + + H+IA+ G+G+ PEERGIF+SL+ ENL+LPP V+K + MS+DEIYE Sbjct: 100 DGKDIMRVPLHRIAYEGLGFVPEERGIFASLNVHENLLLPPVVAKGGGSQGAMSLDEIYE 159 Query: 138 MFPNLKERRNSQGTRLSGGEQQMLAVARILRTGARLLLLDEISEGLAPVIVQALARMITT 197 +FPNL ERRNS GT+LSGGEQQMLA+ARILRTG ++LLLDE +EGLAPVIVQ + ++ Sbjct: 160 LFPNLYERRNSPGTKLSGGEQQMLAIARILRTGVKVLLLDEPTEGLAPVIVQRIGDVLVE 219 Query: 198 LKAKGYTIVMVEQNFRFAAPLADRFYVMEHGQIVESFASSQLEAKMQTLNELLGV 252 LK +G T+++VEQNFRFAA +ADRFY+M+HG + ++F +++L A+M L + LGV Sbjct: 220 LKKRGMTVLLVEQNFRFAAKVADRFYLMDHGVVTDNFPTTELPARMAALTQALGV 274 >RSc1754 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 239 Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 101/243 (41%), Positives = 152/243 (62%), Gaps = 10/243 (4%) Query: 15 SSSAPLVLQISDLQSWYGESHILHNVNLNVHQGEVVTLLGRNGAGRTTTLRSIMGLVGTR 74 +++ P+ L++ L ++YG+SHILH V+L+V +GE+V LLGRNG GR+T +SIMG+V Sbjct: 2 AATTPM-LEVRGLHAYYGKSHILHGVDLHVGEGEIVALLGRNGVGRSTLAKSIMGMVRC- 59 Query: 75 KGSIKINGQETINLATHKIAHHGVGYCPEERGIFSSLSAEENLML-----PPFVSKTDKG 129 +G I + G++ L T ++AH G+GY PE R IF +L+ +NL+L P + Sbjct: 60 EGHILLRGKDVRGLRTFEVAHRGIGYVPENRDIFPTLTVRQNLLLGEKRNP---RQPRPR 116 Query: 130 MSIDEIYEMFPNLKERRNSQGTRLSGGEQQMLAVARILRTGARLLLLDEISEGLAPVIVQ 189 D++Y +FP LKER ++ LSGGEQQML + R L +++DE +EGLAP+IV Sbjct: 117 WQFDDMYRLFPRLKEREHTPAGVLSGGEQQMLTLCRTLMGDPDFVIIDEPTEGLAPLIVA 176 Query: 190 ALARMITTLKAKGYTIVMVEQNFRFAAPLADRFYVMEHGQIVESFASSQLEAKMQTLNEL 249 + + TLKA+G ++++VEQ A ++ R YVM HGQIV + L+A + E Sbjct: 177 QVGEYLKTLKARGISVLLVEQKLAIALDISQRVYVMGHGQIVFEGTPADLKADARVRQEW 236 Query: 250 LGV 252 L V Sbjct: 237 LEV 239 >BMEII0065 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 238 Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 93/239 (38%), Positives = 148/239 (61%), Gaps = 5/239 (2%) Query: 17 SAPLVLQISDLQSWYGESHILHNVNLNVHQGEVVTLLGRNGAGRTTTLRSIMGLVGTRKG 76 +A +L + +L + YG+SHIL V ++ +GE ++LLGRNG+GR+TT+++IMGLV G Sbjct: 2 AAENILDVRELHAHYGKSHILQGVTFDLKKGEAISLLGRNGSGRSTTMKAIMGLVPPTSG 61 Query: 77 SIKINGQETINLATHKIAHHGVGYCPEERGIFSSLSAEENLMLPPFVSKTDKG---MSID 133 + +NG+ + KI G+G+ PEER F +L+ +ENL + + + +G +++ Sbjct: 62 EVLLNGKNLAGERSFKICRAGIGFVPEERETFLNLTVDENLQMG--IQRGAEGATRWTVE 119 Query: 134 EIYEMFPNLKERRNSQGTRLSGGEQQMLAVARILRTGARLLLLDEISEGLAPVIVQALAR 193 ++++ FP LKERRN++ LSGGEQQML + R L ++L+DE +EGLAP IV + Sbjct: 120 QMFDYFPRLKERRNTRAGSLSGGEQQMLTMCRTLLGNPLVMLIDEPTEGLAPKIVAVVGE 179 Query: 194 MITTLKAKGYTIVMVEQNFRFAAPLADRFYVMEHGQIVESFASSQLEAKMQTLNELLGV 252 MI + +G ++V+VEQ A ++ R VM HG+IV +L A + + E L V Sbjct: 180 MIKDINRQGVSVVLVEQKLTIALKVSSRVCVMGHGRIVFEGTPDELTADEKLMEEWLAV 238 >TM1139 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Tma Thermotoga maritima Length = 239 Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 100/227 (44%), Positives = 140/227 (61%), Gaps = 3/227 (1%) Query: 20 LVLQISDLQSWYGESHILHNVNLNVHQGEVVTLLGRNGAGRTTTLRSIMGLVGTRKGSIK 79 +VL++ L +YG H + ++L V +G++VTL+G NGAG+TTTL +I GLV +KG I Sbjct: 4 IVLEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKII 63 Query: 80 INGQETINLATHKIAHHGVGYCPEERGIFSSLSAEENLMLPPFVSKTDKGMSID--EIYE 137 NGQ+ N H I G+ PE R IF L+ ENLM+ + K +G+ D I+ Sbjct: 64 FNGQDITNKPAHVINRMGIALVPEGRRIFPELTVYENLMMGAYNRKDKEGIKRDLEWIFS 123 Query: 138 MFPNLKERRNSQGTRLSGGEQQMLAVARILRTGARLLLLDEISEGLAPVIVQALARMITT 197 +FP LKER G LSGGEQQMLA+ R L + +LL++DE S GLAP++V + +I Sbjct: 124 LFPRLKERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVFEVIQK 183 Query: 198 LKAKGYTIVMVEQNFRFAAPLADRFYVMEHGQIV-ESFASSQLEAKM 243 + +G TI++VEQN A +A YV+E GQIV E AS L+ +M Sbjct: 184 INQEGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDNEM 230 >alr2541 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Nos Nostoc sp. PCC 7120 Length = 264 Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 97/236 (41%), Positives = 144/236 (61%), Gaps = 2/236 (0%) Query: 6 LNADAMTTSSSSAPLVLQISDLQSWYGESHILHNVNLNVHQGEVVTLLGRNGAGRTTTLR 65 +NAD + +L+I +L YG L +NL + +GEVVTL+G NGAG++TTLR Sbjct: 17 MNADESRYENRQDFKILEIQELDVNYGGIQALKKINLTIQKGEVVTLIGANGAGKSTTLR 76 Query: 66 SIMGLVGTRKGSIKINGQETINLATHKIAHHGVGYCPEERGIFSSLSAEENLMLPPFV-- 123 +I +V + G I +G+ H++ G+ +CPE R + + + +NL+L ++ Sbjct: 77 AISKIVTPKNGQIIYSGRNITRRLPHEVVKFGIAHCPEGRRVLAKQTVLDNLLLGAYIRS 136 Query: 124 SKTDKGMSIDEIYEMFPNLKERRNSQGTRLSGGEQQMLAVARILRTGARLLLLDEISEGL 183 ++T+ I + +E+FP L +R+N LSGGEQQMLA+AR L + +LLLLDE S GL Sbjct: 137 NQTEIKADIKQQFELFPRLAQRQNQLAGTLSGGEQQMLAIARALMSRPQLLLLDEPSLGL 196 Query: 184 APVIVQALARMITTLKAKGYTIVMVEQNFRFAAPLADRFYVMEHGQIVESFASSQL 239 AP IV+ + +I L+A G TI++VEQN A +ADR YV+E G I S A+S L Sbjct: 197 APAIVREIFSIIENLRATGVTILLVEQNANLALQIADRGYVLEAGSITLSGAASNL 252 >PA4862 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Pae Pseudomonas aeruginosa Length = 232 Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 92/225 (40%), Positives = 139/225 (61%), Gaps = 4/225 (1%) Query: 21 VLQISDLQSWYGESHILHNVNLNVHQGEVVTLLGRNGAGRTTTLRSIMGLVGTRKGSIKI 80 +LQ+ L +YG SHIL ++ GEV LLGRNG G+TT LR +MGLV R+G + Sbjct: 1 MLQVDKLHQYYGGSHILRGLSFEAKVGEVTCLLGRNGVGKTTLLRCLMGLVPAREGQVAW 60 Query: 81 NGQETINLATHKIAHHGVGYCPEERGIFSSLSAEENLM--LPPFVSKTDKGMSIDEIYEM 138 G+ L H+ G+ Y P+ R IF L+ EENL+ L F ++ + + D IYE+ Sbjct: 61 EGRSLTGLRPHQRVRAGIAYVPQGREIFPRLTVEENLLMGLSRFSARDARAVP-DFIYEL 119 Query: 139 FPNLKERRNSQGTRLSGGEQQMLAVARILRTGARLLLLDEISEGLAPVIVQALARMITTL 198 FP L+E + +G LSGG+QQ LA+ R L + RLL+LDE +EG+ P +++ + ++ +L Sbjct: 120 FPVLREMKQRRGGDLSGGQQQQLAIGRALASQPRLLILDEPTEGIQPSVIKEIGAVVRSL 179 Query: 199 KAKG-YTIVMVEQNFRFAAPLADRFYVMEHGQIVESFASSQLEAK 242 A+G I++VEQ + FAA LAD++ VM G+IV+ +E++ Sbjct: 180 AARGDMAILLVEQFYDFAAELADQYLVMARGEIVQQGRGRDMESE 224 >FN1428 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Fnu Fusobacterium nucleatum Length = 237 Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 92/215 (42%), Positives = 136/215 (63%), Gaps = 5/215 (2%) Query: 21 VLQISDLQSWYGESHILHNVNLNVHQGEVVTLLGRNGAGRTTTLRSIMGLVGTRKGSIKI 80 +L++ DLQ +Y L ++L +++GEVV+++G NGAG+TTTL++I GL+ + GSI Sbjct: 3 MLEVKDLQVFYDNIQALKGISLEINEGEVVSIIGANGAGKTTTLQTISGLITPKSGSIIF 62 Query: 81 NGQETINLATHKIAHHGVGYCPEERGIFSSLSAEENLMLPPFVSKTDKGMSIDE----IY 136 G+ + H I G+ PE R IFS L+ ++NL L F K D +E Y Sbjct: 63 EGKNLLKEKAHNICKLGIAQVPEGRRIFSKLAVKDNLKLGQFTVK-DSAEKKEEDRANFY 121 Query: 137 EMFPNLKERRNSQGTRLSGGEQQMLAVARILRTGARLLLLDEISEGLAPVIVQALARMIT 196 ++FP + ER+N LSGGEQQMLA+ R L + +LL+LDE S GL+P+ V+ + +I Sbjct: 122 KVFPRMSERKNQLAGTLSGGEQQMLAMGRALMSRPKLLILDEPSMGLSPLFVKEIFEVIK 181 Query: 197 TLKAKGYTIVMVEQNFRFAAPLADRFYVMEHGQIV 231 LK KG TI++VEQN + A ++DR YV+E G+IV Sbjct: 182 QLKEKGTTILLVEQNAKMALSISDRAYVIETGEIV 216