BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0491.p (1310 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMc00038_4 [T] COG2200 FOG Sme Sinorhizobium meliloti 300 2e-80 RSc1545 [T] COG5001 Predicted signal transduction protein contai... 295 4e-79 all4225_2 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 291 6e-78 PA0575_4 [T] COG2200 FOG Pae Pseudomonas aeruginosa 278 4e-74 all4897_4 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 266 3e-70 PA4601_3 [T] COG2200 FOG Pae Pseudomonas aeruginosa 263 2e-69 RSc0510_3 [T] COG2200 FOG Rso Ralstonia solanacearum 263 2e-69 RSp1155_5 [T] COG2200 FOG Rso Ralstonia solanacearum 261 7e-69 RSp0813_2 [T] COG2200 FOG Rso Ralstonia solanacearum 261 9e-69 all1175_4 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 260 2e-68 >SMc00038_4 [T] COG2200 FOG Sme Sinorhizobium meliloti Length = 257 Score = 300 bits (767), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 148/256 (57%), Positives = 190/256 (74%) Query: 1052 ERLRIEGDLRNALDHGEFLLHYQPKVDLASGRVIGSEALIRWQHPQLGMVSPARFIGLAE 1111 E+L+ + +LR AL EFLLH+QP++ L +GR+ +EAL+RWQHP G++SPA FI LAE Sbjct: 1 EKLQSQEELREALAREEFLLHFQPQMSLETGRIFAAEALLRWQHPVRGIISPAAFIPLAE 60 Query: 1112 ETGLILPIGAWVLRAACTQCRQWQLGGYADISVSVNLSVGQFLQKDLVSSIADVLEDTGL 1171 ETGLI+PIG WVLR AC Q + WQ G + VSVN+S QF +++ + +A VLE+T L Sbjct: 61 ETGLIVPIGDWVLRTACRQLKAWQDAGLPPLIVSVNVSARQFRERNWAARVAAVLEETCL 120 Query: 1172 PPESLELELTESLMMTDVEHAIGILAGLKKLGVRLSIDDFGTGYSSLAYLKRFPIDVLKI 1231 LELELTESL+M DV AI + L+ +GV L+IDDFGTGYSSL+ LKRFP+ LKI Sbjct: 121 EARYLELELTESLIMQDVPGAIATMHALEAIGVHLAIDDFGTGYSSLSALKRFPVRRLKI 180 Query: 1232 DRSFVRDITIDADDAAITASIISLARHLKLRVIAEGVETDEQLDYLRHYGCDEIQGYLFS 1291 DRSFV DI DADD AIT++IISLA+ L LRVIAEGVET+ Q+++L+ GC EIQGY FS Sbjct: 181 DRSFVTDIPHDADDMAITSAIISLAQKLGLRVIAEGVETEAQVEFLQKSGCGEIQGYFFS 240 Query: 1292 PPVPADKFEQILRQDR 1307 P+P + FE +L +R Sbjct: 241 QPLPGEDFEVLLSSER 256 >RSc1545 [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Rso Ralstonia solanacearum Length = 776 Score = 295 bits (756), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 175/458 (38%), Positives = 257/458 (56%), Gaps = 13/458 (2%) Query: 846 DFYIAPVRDESGEVTHFVAALYDITSMKRYEAELEFQASRDTLTGLINRHMLRHHLEQAI 905 D ++ VR G + +T E + A DTLTGL NR R L+ + Sbjct: 305 DLKVSAVRANDGSYIGPMLTWALVTKEVEAENRIRQLAHYDTLTGLANRTNFREQLDARL 364 Query: 906 GVAERQKQALWVVFVDLDRFKFVNDTLGHKAGDTLLRTVARARRV---READTVARLGGD 962 E + L ++++DLD FK VNDT GH+AGD LL VA+ R R +ARLGGD Sbjct: 365 AAPEAR---LGLLYIDLDGFKLVNDTKGHRAGDALLERVAQRLRAVCDRPGMAIARLGGD 421 Query: 963 EFIMILPEQDELTLDTRSLQRIMDAVAAPVTLGG-HTLFMTCSVGVACYPNDGTDGETLI 1021 EF +++P D T + +++A+ AP LG + + S+G+A P G D E L+ Sbjct: 422 EFAVLVPHDDADRAATLATA-LIEALGAPYALGADQNVRIGASIGIALAPAHGRDTENLL 480 Query: 1022 KHADIAMYRGKQTGRNNFQFYTPAMNEQALERLRIEGDLRNALDHGE-FLLHYQPKVDLA 1080 ADIA+Y K G+ + + M + R +E LR AL+H + + YQP VD+A Sbjct: 481 ARADIALYAAKAAGKGLARLFCADMETRIQARALLEAQLRAALEHQDRLFVFYQPIVDVA 540 Query: 1081 SGRVIGSEALIRWQHPQLGMVSPARFIGLAEETGLILPIGAWVLRAACTQCRQWQLGGYA 1140 +G+V EAL+RW H + G V P F+ +AE++GLI +G +VL AC + +W+ G Sbjct: 541 TGKVTAREALVRWHHAERGWVPPDEFVPIAEQSGLIDQLGRFVLHRACREATRWEDGA-- 598 Query: 1141 DISVSVNLSVGQFLQKDLVSSIADVLEDTGLPPESLELELTESLMMTDVEHAIGILAGLK 1200 V+VN+S Q + L ++ L D+GL P+ LE+E+TE+ ++ + + L L Sbjct: 599 --RVAVNVSPMQLGKATLAQTVHAALIDSGLAPDRLEIEVTETALIQNEAESFEDLRQLY 656 Query: 1201 KLGVRLSIDDFGTGYSSLAYLKRFPIDVLKIDRSFVRDITIDADDAAITASIISLARHLK 1260 +GVR+++DDFGTGYSSLA+L+ FP D +KIDRSFVRD+ D A + +I L R L Sbjct: 657 DMGVRVALDDFGTGYSSLAHLRAFPFDKIKIDRSFVRDLLERPDSAVLVRAIADLGRQLG 716 Query: 1261 LRVIAEGVETDEQLDYLRHYGCDEIQGYLFSPPVPADK 1298 + +AEGVET + +R GC E QGY + P P+D+ Sbjct: 717 VTTVAEGVETQAHVRGIREAGCTEAQGYYYGRPAPSDE 754 >all4225_2 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 Length = 260 Score = 291 bits (746), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 133/253 (52%), Positives = 188/253 (74%) Query: 1052 ERLRIEGDLRNALDHGEFLLHYQPKVDLASGRVIGSEALIRWQHPQLGMVSPARFIGLAE 1111 ERL +E +L AL+ E +++YQP +DL + ++ EAL+RWQHP G+VSPA+FI +AE Sbjct: 1 ERLALENELHGALERNEIVVYYQPIIDLQTKQITAVEALVRWQHPTRGLVSPAKFIPIAE 60 Query: 1112 ETGLILPIGAWVLRAACTQCRQWQLGGYADISVSVNLSVGQFLQKDLVSSIADVLEDTGL 1171 GLI+ IG WVLR AC Q R WQL G I +SVNLS QF + +LV ++++++++GL Sbjct: 61 ANGLIVEIGEWVLRTACLQNRTWQLAGLPPIRMSVNLSARQFEESNLVELVSEIIQESGL 120 Query: 1172 PPESLELELTESLMMTDVEHAIGILAGLKKLGVRLSIDDFGTGYSSLAYLKRFPIDVLKI 1231 P LELE+TES +MTD++ ++ IL L++LGV L++DDFGTGYSSL YLKRFP+++LKI Sbjct: 121 HPSYLELEVTESSLMTDIQRSVTILKQLRELGVWLALDDFGTGYSSLNYLKRFPVNMLKI 180 Query: 1232 DRSFVRDITIDADDAAITASIISLARHLKLRVIAEGVETDEQLDYLRHYGCDEIQGYLFS 1291 DRSFV+D+ + D AA+T +II+LA+ L+L++ AEG+ET +QL YL+ GC E QGY F Sbjct: 181 DRSFVQDVCSNPDSAAVTNAIIALAKSLQLKITAEGIETQQQLSYLQKRGCQEGQGYYFG 240 Query: 1292 PPVPADKFEQILR 1304 P PA + +IL+ Sbjct: 241 IPAPAKEIMEILQ 253 >PA0575_4 [T] COG2200 FOG Pae Pseudomonas aeruginosa Length = 267 Score = 278 bits (712), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 133/248 (53%), Positives = 179/248 (72%) Query: 1052 ERLRIEGDLRNALDHGEFLLHYQPKVDLASGRVIGSEALIRWQHPQLGMVSPARFIGLAE 1111 ER+ +E +LR AL+ E L+YQPK+ L SG ++G+EAL+RW HP G +SP RFI LAE Sbjct: 1 ERMALETELRRALERDELQLYYQPKLSLESGLLVGAEALVRWYHPLFGEISPERFIPLAE 60 Query: 1112 ETGLILPIGAWVLRAACTQCRQWQLGGYADISVSVNLSVGQFLQKDLVSSIADVLEDTGL 1171 + GLILP+G WVL AC Q +WQ +SVNL+ Q Q L+ + +LE +GL Sbjct: 61 DCGLILPLGDWVLEHACQQMGEWQKLHAPFGPLSVNLAGAQLGQPQLIERLEQLLEQSGL 120 Query: 1172 PPESLELELTESLMMTDVEHAIGILAGLKKLGVRLSIDDFGTGYSSLAYLKRFPIDVLKI 1231 P L+LE+TES +M E A+ +L GLK+LGV+L+IDDFGTGYSSL+YLKR P+D+LKI Sbjct: 121 EPSRLQLEITESFIMNQTEEALAVLHGLKRLGVQLAIDDFGTGYSSLSYLKRLPLDILKI 180 Query: 1232 DRSFVRDITIDADDAAITASIISLARHLKLRVIAEGVETDEQLDYLRHYGCDEIQGYLFS 1291 D+SF+R + D DAAIT +II+L R ++L VIAEGVET+ Q +L H GC++IQG++ S Sbjct: 181 DKSFIRGLPDDPHDAAITRAIIALGRSMQLTVIAEGVETEGQQSFLTHEGCEQIQGFVLS 240 Query: 1292 PPVPADKF 1299 PP+PA+ F Sbjct: 241 PPLPAELF 248 >all4897_4 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 Length = 272 Score = 266 bits (680), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 132/261 (50%), Positives = 180/261 (68%), Gaps = 2/261 (0%) Query: 1045 AMNEQALERLRIEGDLRNALDHGEFLLHYQPKVDLASGRVIGSEALIRWQHPQLGMVSPA 1104 +M QA + L++E DLR A++ EF +HYQP V L + ++IG EAL+RWQHPQ G+VSP Sbjct: 3 SMYSQAAQLLQLEMDLRRAVERQEFQVHYQPIVSLETYKIIGFEALVRWQHPQHGLVSPE 62 Query: 1105 RFIGLAEETGLILPIGAWVLRAACTQCRQWQL--GGYADISVSVNLSVGQFLQKDLVSSI 1162 RFI LAEETGLI+PIG WVLR AC Q R WQL + +++SVN+S QF Q +L+ I Sbjct: 63 RFISLAEETGLIVPIGYWVLREACRQMRAWQLEFTTHPPLTISVNISSKQFSQPNLIEEI 122 Query: 1163 ADVLEDTGLPPESLELELTESLMMTDVEHAIGILAGLKKLGVRLSIDDFGTGYSSLAYLK 1222 +L+DTGL SL+LE+TE+++M + E A +L L+++ ++L +DDFG GYSSL+YL Sbjct: 123 RKILQDTGLEASSLKLEITETVLMENHESATAMLLQLQQMNIQLHLDDFGIGYSSLSYLH 182 Query: 1223 RFPIDVLKIDRSFVRDITIDADDAAITASIISLARHLKLRVIAEGVETDEQLDYLRHYGC 1282 RFP LKIDRSFV ++ D + I +IISLA L + VIAEGVET EQL L+ C Sbjct: 183 RFPSSALKIDRSFVINLGADEKNLEIVQAIISLALSLNIDVIAEGVETMEQLRQLQIKKC 242 Query: 1283 DEIQGYLFSPPVPADKFEQIL 1303 QGY+FS P+ + + ++ Sbjct: 243 KHAQGYIFSQPLDSQSVDTLI 263 >PA4601_3 [T] COG2200 FOG Pae Pseudomonas aeruginosa Length = 247 Score = 263 bits (673), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 129/239 (53%), Positives = 167/239 (69%) Query: 1068 EFLLHYQPKVDLASGRVIGSEALIRWQHPQLGMVSPARFIGLAEETGLILPIGAWVLRAA 1127 EF+LHYQP+ R+ G+EAL+RWQHP+ G+V P+ FI + EE GL+ +G W+L A Sbjct: 1 EFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPPSEFIPVLEEIGLVAQVGDWLLAEA 60 Query: 1128 CTQCRQWQLGGYADISVSVNLSVGQFLQKDLVSSIADVLEDTGLPPESLELELTESLMMT 1187 C Q R W VSVNLS QF L IA +L +TG+PP LELELTES++M+ Sbjct: 61 CKQLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILYETGIPPACLELELTESILMS 120 Query: 1188 DVEHAIGILAGLKKLGVRLSIDDFGTGYSSLAYLKRFPIDVLKIDRSFVRDITIDADDAA 1247 DV A+ IL+GLK+LG+ +++DDFGTGYSSL YLK+FPIDVLKIDRSFV + DA Sbjct: 121 DVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQ 180 Query: 1248 ITASIISLARHLKLRVIAEGVETDEQLDYLRHYGCDEIQGYLFSPPVPADKFEQILRQD 1306 I +II++A L L VIAEGVE+ QLD+LR +GCDE+QGYLF P+PA++F + D Sbjct: 181 IARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAEQFGMLYASD 239 >RSc0510_3 [T] COG2200 FOG Rso Ralstonia solanacearum Length = 282 Score = 263 bits (673), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 129/258 (50%), Positives = 173/258 (67%) Query: 1039 FQFYTPAMNEQALERLRIEGDLRNALDHGEFLLHYQPKVDLASGRVIGSEALIRWQHPQL 1098 + F+ +MN ++L++ DLR AL+ E +LHYQPK G V+G EAL+RWQHP+ Sbjct: 1 YCFFEASMNTNVHQQLQLVQDLRLALERHELVLHYQPKFSAPHGPVVGVEALVRWQHPER 60 Query: 1099 GMVSPARFIGLAEETGLILPIGAWVLRAACTQCRQWQLGGYADISVSVNLSVGQFLQKDL 1158 G+V P FI LAE+TGLI+P+GAWVL AC Q QW+ G+A S++VNLS QF L Sbjct: 61 GLVQPDAFIPLAEKTGLIVPLGAWVLDEACRQMAQWRREGHAQWSIAVNLSAVQFAHAAL 120 Query: 1159 VSSIADVLEDTGLPPESLELELTESLMMTDVEHAIGILAGLKKLGVRLSIDDFGTGYSSL 1218 V ++ D L L P+ L LE+TES M D + ++ IL L +GVR+SIDDFGTGYSSL Sbjct: 121 VDTVRDTLARHALEPQGLTLEITESTAMRDADASLHILQQLHAMGVRISIDDFGTGYSSL 180 Query: 1219 AYLKRFPIDVLKIDRSFVRDITIDADDAAITASIISLARHLKLRVIAEGVETDEQLDYLR 1278 YLKR P LKIDR FVRD+ D++DAAI +++++L + L LR++AEGVET+ Q +L Sbjct: 181 LYLKRLPASELKIDRGFVRDLAHDSEDAAIVSAVVALGQTLNLRIVAEGVETEAQQAFLT 240 Query: 1279 HYGCDEIQGYLFSPPVPA 1296 GC +QG L P+ A Sbjct: 241 RLGCHALQGNLLGRPMTA 258 >RSp1155_5 [T] COG2200 FOG Rso Ralstonia solanacearum Length = 268 Score = 261 bits (668), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 133/253 (52%), Positives = 175/253 (69%), Gaps = 2/253 (0%) Query: 1053 RLRIEGDLRNALDHGEFLLHYQPKVDLASGRVIGSEALIRWQHPQLGMVSPARFIGLAEE 1112 R +E LR+A D+ E L YQPK DLAS R++G+EAL+RW +LG VSPA FI +AEE Sbjct: 2 RYLLETALRDARDNSELQLVYQPKYDLASHRIVGAEALLRWNSVKLGAVSPAEFIPVAEE 61 Query: 1113 TGLILPIGAWVLRAACTQCRQW-QLGGYADISVSVNLSVGQFLQKDLVSSIADVLEDTGL 1171 TGLI+PIG WVLR AC Q +W Q GY D ++VNLS QF D+V +I L +TGL Sbjct: 62 TGLIVPIGEWVLRRACEQAVEWYQALGY-DFRMAVNLSARQFQTGDVVPTIEQTLAETGL 120 Query: 1172 PPESLELELTESLMMTDVEHAIGILAGLKKLGVRLSIDDFGTGYSSLAYLKRFPIDVLKI 1231 PP +LE+E+TESL+M + + L G+R+SIDDFGTGYSSL+YL+RFPI +KI Sbjct: 121 PPTALEVEITESLLMGGADEVRPMFDALTAQGIRISIDDFGTGYSSLSYLQRFPISNVKI 180 Query: 1232 DRSFVRDITIDADDAAITASIISLARHLKLRVIAEGVETDEQLDYLRHYGCDEIQGYLFS 1291 DRSF+ I D D A+T +I+++AR L + V AEGVE +Q+++L GC EIQGY Sbjct: 181 DRSFILGIPGDPDSVALTEAIVAMARALGMTVTAEGVEDADQVEFLAKAGCQEIQGYYIG 240 Query: 1292 PPVPADKFEQILR 1304 PV A+ F+++LR Sbjct: 241 KPVTAEGFDRLLR 253 >RSp0813_2 [T] COG2200 FOG Rso Ralstonia solanacearum Length = 284 Score = 261 bits (666), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 135/263 (51%), Positives = 178/263 (67%), Gaps = 12/263 (4%) Query: 1053 RLRIEGDLRNALDHGEFLLHYQPKVDL----------ASGRVIGSEALIRWQHPQLGMVS 1102 RLR+E DLR AL+H E LL YQP++ L S V G EAL+RW+HP++G++ Sbjct: 2 RLRVESDLRRALEHEELLLVYQPQIRLDALAQAGAHVCSAHVHGVEALVRWRHPEIGLIG 61 Query: 1103 PARFIGLAEETGLILPIGAWVLRAACTQCRQWQLGGYADISVSVNLSVGQFLQKDLVSSI 1162 P FI +AEETGLI+P+G WVLR AC Q QW G A + V+VNLS Q L ++ Sbjct: 62 PGEFIAVAEETGLIVPLGLWVLRTACQQAAQWLHAGRATLRVAVNLSPRQARDPALAENV 121 Query: 1163 ADVLEDTGLPPESLELELTESLMMTDVEHAIGILAGLKKLGVRLSIDDFGTGYSSLAYLK 1222 +L +TGLPP LELE+TES++M D++ I +L L GV LSIDDFGTGYSSLAYL+ Sbjct: 122 LGILRETGLPPHLLELEITESVLMEDIDANIRLLEALHAAGVNLSIDDFGTGYSSLAYLQ 181 Query: 1223 RFPIDVLKIDRSFVRDITIDADDAAITASIISLARHLKLRVIAEGVETDEQLDYLRHYGC 1282 RFPI LKIDRSFV+ + D + AI +++I++A L+++V+AEGVE QL +LR GC Sbjct: 182 RFPIHKLKIDRSFVQRMPGDGE--AIASAVIAMAHSLRMQVVAEGVEHAGQLAWLRAAGC 239 Query: 1283 DEIQGYLFSPPVPADKFEQILRQ 1305 D QGYLFS P+ A++ LR+ Sbjct: 240 DLGQGYLFSRPLHAEQLMSWLRR 262 >all1175_4 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 Length = 261 Score = 260 bits (664), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 121/256 (47%), Positives = 181/256 (70%) Query: 1052 ERLRIEGDLRNALDHGEFLLHYQPKVDLASGRVIGSEALIRWQHPQLGMVSPARFIGLAE 1111 E L +E LR AL+ E ++YQP+V++ +G++ G EAL+RWQHP++G+V+P+ FI +AE Sbjct: 1 ELLTLEKSLRYALEKQELKVYYQPRVNILTGQITGMEALLRWQHPEMGIVAPSIFIPIAE 60 Query: 1112 ETGLILPIGAWVLRAACTQCRQWQLGGYADISVSVNLSVGQFLQKDLVSSIADVLEDTGL 1171 ETGLI+PIG WVLR AC Q R WQ G + ++VNLS QF Q L+ ++ +L +TGL Sbjct: 61 ETGLIIPIGEWVLRTACMQNRAWQEAGLPPVQMAVNLSPKQFRQPTLLELVSAILAETGL 120 Query: 1172 PPESLELELTESLMMTDVEHAIGILAGLKKLGVRLSIDDFGTGYSSLAYLKRFPIDVLKI 1231 PE LELE+TES + D++ +L L+++GV ++IDDFGTG+SSL+ L+ P+ LKI Sbjct: 121 APEFLELEITESTAIEDIDFTRSVLENLQQMGVDIAIDDFGTGHSSLSRLQLLPLHNLKI 180 Query: 1232 DRSFVRDITIDADDAAITASIISLARHLKLRVIAEGVETDEQLDYLRHYGCDEIQGYLFS 1291 D SF++ +T D+ A I +I++L R L LR+ AEGVE E+LD+L+ C ++QG+LF Sbjct: 181 DGSFIKALTTDSKVAHIVKAIVTLGRSLGLRLTAEGVEKQEELDFLKSINCQDVQGFLFH 240 Query: 1292 PPVPADKFEQILRQDR 1307 P+ A+K +IL+ ++ Sbjct: 241 KPLSAEKATEILQGEK 256