BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0480.p (459 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2348 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetr... 652 0.0 PA2326 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetr... 528 e-149 Cgl0986 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tet... 478 e-134 BS_yxeK [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tet... 280 3e-75 mlr9217 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tet... 277 5e-74 SMb21691 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene te... 255 1e-67 AGl2773 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tet... 255 2e-67 mll2278 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tet... 253 5e-67 mlr7299 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tet... 250 5e-66 AGpT161 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tet... 243 5e-64 >PA2348 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Pae Pseudomonas aeruginosa Length = 462 Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust. Identities = 310/452 (68%), Positives = 369/452 (81%), Gaps = 1/452 (0%) Query: 1 MAKKEIRLNAFNMNCVSHINHGLWTHPRDRSQDYTDIAYWTDLARLLERGKFDGLFLADI 60 M+KK+I LNAF+MNCV HINHGLWTHPRDRS DY + +WT+LARLLERG FDGLF+ADI Sbjct: 1 MSKKQILLNAFSMNCVGHINHGLWTHPRDRSSDYRKLRHWTELARLLERGLFDGLFIADI 60 Query: 61 VGVYDVYQGNTDLTLRETIQLPVNDPLMLVPAMAAVTEHLGFGVTANLTYEAPFLFARRM 120 +GVYDVYQG ++T RE +QLPVNDPLMLV AMA VTEHLGFGVTANLTYEAP+ FARR+ Sbjct: 61 LGVYDVYQGGIEVTAREAVQLPVNDPLMLVSAMAGVTEHLGFGVTANLTYEAPYPFARRL 120 Query: 121 STLDHLSRGRVGWNIVTGYLDSAARAMGLHEQLEHDQRYDRADEFMEVVYKLWEGSWEDG 180 STLDHLS GR+GWNIVTGYL+SAA+AMG Q+EHD+RYDRADE++EV+YKLWEGSWED Sbjct: 121 STLDHLSDGRIGWNIVTGYLESAAKAMGQSAQIEHDRRYDRADEYLEVLYKLWEGSWEDD 180 Query: 181 AVLRDRARRVYADPAKVHKIAHHGDYYHVEGIHLSEPSRQRTPVLYQAGSSGRGQAFGAR 240 AVL DR RRVYA P K+HKI HHG++Y VEG HL+EPS QRTPVL+QAGSS RG AF AR Sbjct: 181 AVLADRQRRVYARPEKIHKIRHHGEFYQVEGYHLAEPSPQRTPVLFQAGSSERGLAFAAR 240 Query: 241 HAECVFISSQSKDATRKLVQSIRDGAVREGRDPDAIKIFMGLTVVTGRTEQQAQERYREY 300 HAECVF+S Q+++ATR+LVQ IR V GR + I+IFMG+ V+ T +A++++ EY Sbjct: 241 HAECVFVSGQTREATRQLVQRIRAAVVGAGRRAEDIRIFMGINVIVAATAAEARDKHAEY 300 Query: 301 ARYASPEAGLAHYSAGTGIDFSQYELDEPIRPAKTNAIESLTKVVTQPELNWTKRKLLQQ 360 RYASPEAGLAH+++ +GID S+Y LDEPIR K NAIES+ K +T + T RKLL Q Sbjct: 301 RRYASPEAGLAHFASSSGIDLSRYGLDEPIRYEKNNAIESVVKNLTVARTDSTVRKLLDQ 360 Query: 361 LELGGRYASIVGAPDRVADELESWVADTGIDGYNLTRTVTPESFEDFVELVIPVLQERGS 420 L LGGRY ++VG P +VAD+LE W+ADTG+DG+NLTRTV PES+ DF++LV+P LQ RGS Sbjct: 361 LALGGRYVTLVGDPRQVADDLEGWIADTGLDGFNLTRTVEPESYADFIDLVVPELQARGS 420 Query: 421 YKREYAQGTLREKLFQRG-ATLPQEHVGAGFR 451 YK YA GTLREKLF G A L EH GA FR Sbjct: 421 YKTAYAPGTLREKLFGDGRARLQAEHAGAAFR 452 >PA2326 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Pae Pseudomonas aeruginosa Length = 469 Score = 528 bits (1360), Expect = e-149, Method: Compositional matrix adjust. Identities = 251/450 (55%), Positives = 323/450 (71%), Gaps = 2/450 (0%) Query: 4 KEIRLNAFNMNCVSHINHGLWTHPRDRSQDYTDIAYWTDLARLLERGKFDGLFLADIVGV 63 +EIRLNAF MNCV H + GLW HPRDRS Y D+ YWTDLARLLERG+FDGLF+AD++G+ Sbjct: 3 REIRLNAFEMNCVGHQSPGLWAHPRDRSSQYKDLEYWTDLARLLERGRFDGLFIADVLGI 62 Query: 64 YDVYQGNTDLTLRETIQLPVNDPLMLVPAMAAVTEHLGFGVTANLTYEAPFLFARRMSTL 123 YDV GN D +R+ Q+PVNDPL L+ MAAVT HLGFG+TA+L++E P+ FARR+STL Sbjct: 63 YDVLDGNGDAAIRQAAQVPVNDPLALITPMAAVTRHLGFGLTASLSFEHPYPFARRLSTL 122 Query: 124 DHLSRGRVGWNIVTGYLDSAARAMGLHEQLEHDQRYDRADEFMEVVYKLWEGSWEDGAVL 183 DHL++GR+GWN+VT YL+S AR +G QL+HD+RYD ADE+++V+YKL+EGSWEDGAVL Sbjct: 123 DHLTKGRIGWNVVTSYLESGARNLGQQAQLDHDRRYDYADEYLQVLYKLFEGSWEDGAVL 182 Query: 184 RDRARRVYADPAKVHKIAHHGDYYHVEGIHLSEPSRQRTPVLYQAGSSGRGQAFGARHAE 243 RDR RR+++DP K+H+I H G+++ V GIHL EPS QRTPVLYQAG+S RG+ F A HAE Sbjct: 183 RDRRRRIFSDPGKIHEIRHVGEHFQVPGIHLCEPSPQRTPVLYQAGASSRGKRFAAEHAE 242 Query: 244 CVFISSQSKDATRKLVQSIRDGAVREGRDPDAIKIFMGLTVVTGRTEQQAQERYREYARY 303 CVF+++ SK ++ V IR GRDP + +F TVV G T+ +A+ ++ EY + Sbjct: 243 CVFVAAPSKTVLKQAVADIRQRVAEAGRDPRKVLVFNLQTVVLGETDAKARAKFDEYRAF 302 Query: 304 ASPEAGLAHYSAGTGIDFSQYELDEPIRPAKTNAIESLTKVVTQ--PELNWTKRKLLQQL 361 S E LA S TGIDF QY D+ +R TNAI+S + + P WT R+L + Sbjct: 303 VSYEGALALISGWTGIDFGQYRPDQVLRHIHTNAIQSAVEAFSSADPTRTWTVRELADWV 362 Query: 362 ELGGRYASIVGAPDRVADELESWVADTGIDGYNLTRTVTPESFEDFVELVIPVLQERGSY 421 +GG VG+P VAD L+ WV DT +DG+NL + E+F D VEL++P LQ+RG Y Sbjct: 363 GIGGFGPLFVGSPATVADLLQEWVEDTDVDGFNLAYALAHETFSDVVELLVPELQKRGVY 422 Query: 422 KREYAQGTLREKLFQRGATLPQEHVGAGFR 451 K EYA GTLREKLF G LP H AG+R Sbjct: 423 KTEYAPGTLREKLFGDGPRLPDSHPAAGYR 452 >Cgl0986 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Cgl Corynebacterium glutamicum Length = 487 Score = 478 bits (1230), Expect = e-134, Method: Compositional matrix adjust. Identities = 233/454 (51%), Positives = 307/454 (67%), Gaps = 2/454 (0%) Query: 3 KKEIRLNAFNMNCVSHINHGLWTHPRDRSQDYTDIAYWTDLARLLERGKFDGLFLADIVG 62 ++I NAF+MNCV+H + GLWTHP+D+++DY + YW LA+ LE+G FDGLF+AD++G Sbjct: 11 NRKILFNAFDMNCVAHQSPGLWTHPKDKARDYNTLDYWVHLAKTLEKGLFDGLFIADVLG 70 Query: 63 VYDVYQGNTDLTLRETIQLPVNDPLMLVPAMAAVTEHLGFGVTANLTYEAPFLFARRMST 122 YDVY + + L Q+PVNDP++LV AMA T++LGFG+TA YE P+ FARR++T Sbjct: 71 TYDVYGSSNEAALSSGAQVPVNDPILLVSAMAYATKNLGFGITAGTAYEHPYPFARRLAT 130 Query: 123 LDHLSRGRVGWNIVTGYLDSAARAMGLHEQLEHDQRYDRADEFMEVVYKLWEGSWEDGAV 182 LDHL+ GRVGWN+VTGYL SAA+ MG +QL HD+RYD+ADE++EV+YKL EGSWED AV Sbjct: 131 LDHLTNGRVGWNVVTGYLPSAAQNMGDTDQLPHDERYDKADEYLEVIYKLLEGSWEDDAV 190 Query: 183 LRDRARRVYADPAKVHKIAHHGDYYHVEGIHLSEPSRQRTPVLYQAGSSGRGQAFGARHA 242 + V+ D +KVH I HHG Y+ V GI ++EPS QRTPV+YQAG+S RG F +A Sbjct: 191 QNNTETSVFTDSSKVHAINHHGKYFDVPGIAITEPSVQRTPVIYQAGASPRGLKFAGENA 250 Query: 243 ECVFISSQSKDATRKLVQSIRDGAVREGRDPDAIKIFMGLTVVTGRTEQQAQERYREYAR 302 E VFI+S + +A K V IR AV GRDP A+KIF T++TG TE AQ + EY+R Sbjct: 251 EAVFINSSTVEAITKTVAKIRAAAVAAGRDPHAVKIFAMQTIITGETEADAQAKLEEYSR 310 Query: 303 YASPEAGLAHYSAGTGIDFSQYELDEPIRPAKTNAIESLTKVVTQ--PELNWTKRKLLQQ 360 Y P GL S TG D SQY+LDEPI ++NAI+S ++ E WT RKL + Sbjct: 311 YIDPVGGLTLMSGWTGADLSQYDLDEPITNIESNAIQSTAATISNGTGEGAWTVRKLGEA 370 Query: 361 LELGGRYASIVGAPDRVADELESWVADTGIDGYNLTRTVTPESFEDFVELVIPVLQERGS 420 +GG +VG+ VA EL + +DG+NL +TP +FED V+ V+P LQ+ Sbjct: 371 TGIGGFGPVLVGSGANVAAELARIQDLSDVDGFNLAYAITPGTFEDVVDFVVPELQKLSR 430 Query: 421 YKREYAQGTLREKLFQRGATLPQEHVGAGFRVGA 454 YK EYA G+LR KL +G L H GA +R+GA Sbjct: 431 YKTEYAPGSLRNKLLGKGDRLDDTHRGASYRLGA 464 >BS_yxeK [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Bsu Bacillus subtilis Length = 441 Score = 280 bits (717), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 161/438 (36%), Positives = 241/438 (55%), Gaps = 22/438 (5%) Query: 3 KKEIRLNAFNMNCVSHINHGLWTHPRDRSQDYTDIAYWTDLARLLERGKFDGLFLADIVG 62 KK+I+L F H+ W HP S ++ Y+ +LA+ ERGK D LFLAD + Sbjct: 5 KKQIKLGVFLAGTGHHV--ASWRHPDAPSDASMNLDYFKELAKTAERGKLDMLFLADSLS 62 Query: 63 VYDVYQGNTDLTLRETIQLPVNDPLMLVPAMAAVTEHLGFGVTANLTYEAPFLFARRMST 122 + N L +P L+ A+A VT +G TA+ TY PF AR+ ++ Sbjct: 63 IDSKSHPNV---------LTRFEPFTLLSALAQVTSKIGLTATASTTYSEPFHIARQFAS 113 Query: 123 LDHLSRGRVGWNIVTGYLDSAARAMGLHEQLEHDQRYDRADEFMEVVYKLWEGSWEDGAV 182 LDHLS GR GWN+VT ++S A + LEH RY RA+EF+E+V LW+ SWE+ A Sbjct: 114 LDHLSNGRAGWNVVTSSIESTALNFSGEKHLEHHLRYQRAEEFVEIVKGLWD-SWEEDAF 172 Query: 183 LRDRARRVYADPAKVHKIAHHGDYYHVEGIHLSEPSRQRTPVLYQAGSSGRGQAFGARHA 242 +R++ + D K+H++ H G+Y+ V G + Q PV+ QAGSSG G+A A+ A Sbjct: 173 IRNKETGEFFDKEKMHELNHKGEYFSVRGPLNVSRTPQGQPVIIQAGSSGDGKALAAKTA 232 Query: 243 ECVFISSQSKDATRKLVQSIRDGAVREGRDPDAIKIFMGLTVVTGRTEQQAQERYREYAR 302 E +F + ++ ++ QSI++ A GRDP+ I I G+ + TE+ AQ +Y+E Sbjct: 233 EVIFTAQNHLESAQEFYQSIKEQAAEFGRDPEKIAIMPGIFPIIADTEEAAQAKYKELQD 292 Query: 303 YASPEAG---LAHYSAGTGIDFSQYELDEP---IRPAKTNAIESLTKVVTQ--PELNWTK 354 P G L +Y GID S Y LD P + +NA++S K+V + N T Sbjct: 293 LIIPSVGLQILQNYLG--GIDLSAYPLDGPLPKLDAEASNAVKSRFKLVQEMAERDNMTI 350 Query: 355 RKLLQQLELGGRYASIVGAPDRVADELESWVADTGIDGYNLTRTVTPESFEDFVELVIPV 414 R+L + + + VG P+++AD+++ WV DG+N+ + PE E FV+ V+P+ Sbjct: 351 RELYKYVAGSRGHHIFVGTPEQLADKMQEWVDTKACDGFNIMPPLLPEGIEVFVDQVVPI 410 Query: 415 LQERGSYKREYAQGTLRE 432 LQERG +++EY TLRE Sbjct: 411 LQERGVFRKEYEGTTLRE 428 >mlr9217 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Mlo Mesorhizobium loti Length = 426 Score = 277 bits (708), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 154/432 (35%), Positives = 235/432 (54%), Gaps = 11/432 (2%) Query: 6 IRLNAFNMNCVSHINHGLWTHPRDRSQDYTDIAYWTDLARLLERGKFDGLFLADIVGVYD 65 ++ AF + + +H +W HP+ ++ + D A+W L R LE G+FDGLF AD++ ++ Sbjct: 1 MKFVAFLLAGPTCHHHAMWRHPQTENR-FLDPAFWETLGRTLEAGRFDGLFFADVLSFHN 59 Query: 66 VYQGNTDLTLRETIQLPVNDPLMLVPAMAAVTEHLGFGVTANLTYEAPFLFARRMSTLDH 125 + T+ Q+ + DP+ LV MA T +G GVT + T++ P+ AR +S+LD Sbjct: 60 ------ETTMTRGGQMSLLDPVPLVAMMARATSRIGLGVTLSTTFQDPYAIARVLSSLDV 113 Query: 126 LSRGRVGWNIVTGYLDSAARAMGLHEQLEHDQRYDRADEFMEVVYKLWEGSWEDGAVLRD 185 LS GR+ WNIVT + D A+ G L +RY+RA+E ++V LW G W DGA++ D Sbjct: 114 LSGGRIAWNIVTSFSDLDAQIFGEEALLPRSERYERAEEVLKVCLDLWTG-WADGALVLD 172 Query: 186 RARRVYADPAKVHKIAHHGDYYHVEGIHLSEPSRQRTPVLYQAGSSGRGQAFGARHAECV 245 + + D AKV + G Y G+ PS QR PV+ QAGSS RG+ F A HAE V Sbjct: 173 KESGDFIDEAKVRRTEIAGKYVGARGVFTVPPSPQRHPVIMQAGSSPRGRDFAASHAELV 232 Query: 246 FISSQSKDATRKLVQSIRDGAVREGRDPDAIKIFMGLTVVTGRTEQQAQERYREYARYAS 305 F S ++ ++D R GR+PD I + + + G T A+E+ Sbjct: 233 FTLQHSLPDMQEFYAEMKDRVGRAGRNPDDCAILVSVDPIVGETNSLAREKQAYINDLVD 292 Query: 306 PEAGLAHYSAGTGIDFSQYELDEPI--RPAKTNAIESLTKVVTQPEL-NWTKRKLLQQLE 362 P G+ S TG+D SQY +D+PI PA+T + S ++ + N T + + Sbjct: 293 PHVGIPFMSDHTGLDLSQYPVDKPIIDIPAETGSRGSFDIILQGTKANNLTLGEAAKHFA 352 Query: 363 LGGRYASIVGAPDRVADELESWVADTGIDGYNLTRTVTPESFEDFVELVIPVLQERGSYK 422 + +VG P+ VAD+L+ + + G DG+ +T T P SFE F V+P+LQ+RG ++ Sbjct: 353 VSELCPQVVGTPETVADQLQDFFENKGCDGFIVTPTEMPGSFEAFTRSVVPILQKRGLFR 412 Query: 423 REYAQGTLREKL 434 +EY TLRE + Sbjct: 413 KEYPGSTLRETI 424 >SMb21691 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Sme Sinorhizobium meliloti Length = 449 Score = 255 bits (652), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 158/438 (36%), Positives = 234/438 (53%), Gaps = 18/438 (4%) Query: 4 KEIRLNAFNMNCVSHINHGLWTHPRDRSQDYTDIAYWTDLARLLERGKFDGLFLAD--IV 61 ++I+L AF HI W HP + T+ + LA ERG FD FLAD V Sbjct: 3 RQIKLGAFLPGGGQHI--AAWRHPDAPADGATNFEFHRRLAETAERGLFDAYFLADNLSV 60 Query: 62 GVYDVYQGNTDLTLRETIQLPVNDPLMLVPAMAAVTEHLGFGVTANLTYEAPFLFARRMS 121 G+ GN + E P+ L A+A +T HLGF TA+ TYE P+ AR+ + Sbjct: 61 GLGGREGGNAKIAGFE--------PVTLFAALAPLTTHLGFIATASTTYEEPYTLARKFA 112 Query: 122 TLDHLSRGRVGWNIVTGYLDSAARAMGLHEQLEHDQRYDRADEFMEVVYKLWEGSWEDGA 181 +LD LS GR GWN+VT D AR Q H RY+RA E +E V LW+ SWED A Sbjct: 113 SLDLLSNGRAGWNVVTSAGDETARNFNRETQPSHADRYERAHEHVETVKALWD-SWEDDA 171 Query: 182 VLRDRARRVYADPAKVHKIAHHGDYYHVEGIHLSEPSRQRTPVLYQAGSSGRGQAFGARH 241 +RD+A + D +VH I H G ++ V+G + Q PV+ QAG S G+ A Sbjct: 172 FIRDKATGRFFDAGRVHDIDHKGKHFSVKGPLNAPRPVQGHPVVVQAGQSEDGRRLAAVS 231 Query: 242 AECVFISSQSKDATRKLVQSIRDGAVREGRDPDAIKIFMGLTVVTGRTEQQAQERYREYA 301 AE +F + Q+ + ++ + I+ R GR+P+ + I G+ GRTE++A+ +Y E Sbjct: 232 AEVIFTAHQNLASAQEFYRDIKARVKRAGRNPEHVLIMPGVAPFVGRTEEEARSKYEELN 291 Query: 302 RYASPEAGLAHYSAGTG--IDFSQYELDEPIRPA-KTNAIESLTKVVTQ--PELNWTKRK 356 PE G+A + TG +D + Y LD P+ + +T ++S ++ + E +T R+ Sbjct: 292 ALIVPEDGVALLNGLTGGTLDLTGYPLDGPLPVSNETEGMKSRQALIRKIADEHGFTIRQ 351 Query: 357 LLQQLELGGRYASIVGAPDRVADELESWVADTGIDGYNLTRTVTPESFEDFVELVIPVLQ 416 L Q + + ++VG+ ++VAD+LE W DG+N+ P + +DFV+LVIP+LQ Sbjct: 352 LYQWIATARGHYTVVGSAEQVADQLEEWFLSEAADGFNILPPWLPGALDDFVDLVIPILQ 411 Query: 417 ERGSYKREYAQGTLREKL 434 RG ++ Y TLRE L Sbjct: 412 RRGLFRTAYEGRTLRENL 429 >AGl2773 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 450 Score = 255 bits (651), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 156/442 (35%), Positives = 233/442 (52%), Gaps = 23/442 (5%) Query: 1 MAKK--EIRLNAFNMNCVSHINHGLWTHPRDRSQDYTDIAYWTDLARLLERGKFDGLFLA 58 M++K ++ LNAF H W HP TDI + D+AR E K D +F A Sbjct: 1 MSRKSEKLVLNAFIYPGGHH--EAAWRHPESEPLRVTDIKLYQDIARKAEAAKLDAIFFA 58 Query: 59 DIVGVYDVYQGNTDLTLRETIQLPVNDPLMLVPAMAAVTEHLGFGVTANLTYEAPFLFAR 118 D V N R ++ P+ ++ A+AAVTE +GF TA+ TY P+ AR Sbjct: 59 DA----PVLDANIRYAARHRLE-----PITMLAALAAVTEKIGFIATASTTYYEPYNLAR 109 Query: 119 RMSTLDHLSRGRVGWNIVTGYLDSAARAMGLHEQLEHDQRYDRADEFMEVVYKLWEGSWE 178 ++++DH+S GRVGWNIVT D+AA L + H RY +A EF+EVV KLW+ SWE Sbjct: 110 LLASVDHISGGRVGWNIVTTSADAAAGNFNLQQHPPHADRYRQATEFVEVVTKLWD-SWE 168 Query: 179 DGAVLRDRARRVYADPAKVHKIAHHGDYYHVEGIHLSEPSRQRTPVLYQAGSSGRGQAFG 238 D A++ DR ++AD ++H +H G++Y V G S Q PV QAGSS G+ F Sbjct: 169 DDAIVADRESGLFADTDRIHPASHDGEFYRVRGALNLPRSPQGRPVYVQAGSSEDGRGFA 228 Query: 239 ARHAECVFISSQSKDATRKLVQSIRDGAVREGRDPDAIKIFMGLTVVTGRTEQQAQERYR 298 AR+AE +F + Q+ ++ R I+ GR+P +KI G++ TE++A++ Sbjct: 229 ARYAEAIFTAHQTLESARSFYSDIKRRVAATGRNPAHVKILPGISPFIASTEEEARKLEA 288 Query: 299 EYARYASPEAGLAHYSAGTGIDFSQYELDEPI--------RPAKTNAIESLTKVVTQPEL 350 + P L TGID S +LD+P+ R ++ L V E Sbjct: 289 SFNDLIQPAFSLGQLQRITGIDLSSADLDQPLPKEAVEATRAQADSSRHQLVLDVIDRE- 347 Query: 351 NWTKRKLLQQLELGGRYASIVGAPDRVADELESWVADTGIDGYNLTRTVTPESFEDFVEL 410 N T R+LL +L G + I G P++VAD +E+W + DG+N+ F+ FV+ Sbjct: 348 NPTIRQLLHRLAGGRGHKVISGTPEQVADWIETWFREGAADGFNIMPPWLNGGFDIFVDE 407 Query: 411 VIPVLQERGSYKREYAQGTLRE 432 V+P+L++RG ++ +Y TLR+ Sbjct: 408 VVPILKQRGLFREDYEGDTLRD 429 >mll2278 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Mlo Mesorhizobium loti Length = 450 Score = 253 bits (647), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 148/418 (35%), Positives = 231/418 (55%), Gaps = 15/418 (3%) Query: 24 WTHPRDRSQDYTDIAYWTDLARLLERGKFDGLFLADIVGVYDVYQGNTDLTLRETIQLPV 83 W HPR ++ D Y+ +L + ER + D +F+AD V ++D + ++ Sbjct: 21 WRHPRAPGREVLDFDYYRELVQAAERARIDTIFVADHVSIWDSVKSGVAHYANARLE--- 77 Query: 84 NDPLMLVPAMAAVTEHLGFGVTANLTYEAPFLFARRMSTLDHLSRGRVGWNIVTGYLDSA 143 PL L+ A+AAVT+H+G TA+ +Y P+ AR ++LDH+S+GR WN+VT +D Sbjct: 78 --PLTLLSALAAVTKHIGLITTASSSYSEPYNVARLFASLDHISKGRASWNVVTSAMDEE 135 Query: 144 ARAMGLHEQLEHDQRYDRADEFMEVVYKLWEGSWEDGAVLRDRARRVYADPAKVHKIAHH 203 AR G +EH RY+RA EF+++V LW+ SWED A+L D+ +ADP KVH I H Sbjct: 136 ARNFGRDGNIEHAFRYERAGEFLDIVKALWD-SWEDEALLIDKETGYFADPDKVHPIDHK 194 Query: 204 GDYYHVEG-IHLSEPSRQRTPVLYQAGSSGRGQAFGARHAECVFISSQSKDATRKLVQSI 262 G ++ V G +++S P Q P++ QAGSS G+ F HA+ F +++ K Q I Sbjct: 195 GKHFKVRGPLNVSRPP-QGHPLIVQAGSSEDGKNFATAHADAHFAIYSTREDGIKYRQDI 253 Query: 263 RDGAVREGRDPDAIKIFMGLTVVTGRTEQQAQERYREYARYASP-EAGLAHYSAGTGIDF 321 + R GR P++ KI G+ + +E + +++ +EY + P + G+ S+ +GID Sbjct: 254 NERLARHGRRPESFKILPGILPIVAASEAEGRDK-QEYLQTLLPDQVGIDLLSSWSGIDL 312 Query: 322 SQYELDEPIRPAKTNAI-----ESLTKVVTQPELNWTKRKLLQQLELGGRYASIVGAPDR 376 S Y D P+ P + SL +V + N + R + ++L G ++ G P + Sbjct: 313 SAYPPDGPLPPLPDESTFNGGRTSLNRVKQWSKQNLSLRDIARKLANSGSVPTVAGTPKQ 372 Query: 377 VADELESWVADTGIDGYNLTRTVTPESFEDFVELVIPVLQERGSYKREYAQGTLREKL 434 +AD+LE W DG+NL + PE + +F E V+P LQ RG EYA GTLR++L Sbjct: 373 IADQLEDWFVSGAADGFNLMFPLLPEDWVNFAEQVVPELQRRGLVPTEYAPGTLRDRL 430 >mlr7299 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Mlo Mesorhizobium loti Length = 451 Score = 250 bits (639), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 161/438 (36%), Positives = 241/438 (55%), Gaps = 17/438 (3%) Query: 3 KKEIRLNAFNMNCVSHINHGLWTHPRDRSQDYTDIAYWTDLARLLERGKFDGLFLADIVG 62 +++RL AF M VS ++ G W +P + A+ A+ LE KFD F+AD + Sbjct: 4 NRQLRLGAF-MRPVS-LHTGAWRYPGAYPDANFNFAHLKRFAQTLEAAKFDAFFMADHLA 61 Query: 63 VYDVYQGNTDLTLRETIQLPVNDPLMLVPAMAAVTEHLGFGVTANLTYEAPFLFARRMST 122 V ++ LR + + +P L+ A+AAVT+H+G TA+ T++AP+ ARR ++ Sbjct: 62 VLNM----PIEALRRSHTVTSFEPFTLLSALAAVTDHIGLVATASTTFDAPYHIARRFAS 117 Query: 123 LDHLSRGRVGWNIVTGYLDSAARAMGLHEQLEHDQRYDRADEFMEVVYKLWEGSWEDGAV 182 LDH+S GR GWNIVT AA GL E +EHD+RY RA EF +VV LW+ S+ D A Sbjct: 118 LDHISGGRAGWNIVTTSNPDAALNFGLDEHVEHDERYHRAREFYDVVTGLWD-SFADDAF 176 Query: 183 LRDRARRVYADPAKVHKIAHHGDYYHVEG-IHLSEPSRQRTPVLYQAGSSGRGQAFGARH 241 +RD +Y DPAK+H + H G++ V G ++++ P Q PV+ QAG+S G+ A Sbjct: 177 IRDAESGLYFDPAKLHVLDHKGEHLSVRGPLNIARPV-QGWPVIVQAGASEAGRQLAAET 235 Query: 242 AECVFISSQSKDATRKLVQSIRDGAVREGRDPDAIKIFMGLTVVTGRTEQQAQERYREYA 301 AE +F + A + ++ A + GR D IKI G VV G + + A+ + + Sbjct: 236 AEVIFAAHADLAAGQHFFADVKGRAQKLGRSRDDIKILPGAFVVVGDSVEDARAKRAKLD 295 Query: 302 RYASPEAGLAHYSAGTGIDFSQYELDEPI-RPAKTNAIESLTKVVTQ--PELNWTKRKLL 358 E+G+A S G + S ++ D + +TNA +S + V + N T R+L Sbjct: 296 SLVYYESGIASLSIALGHNASAFDPDAALPEIPETNASKSSRERVIELARNENLTVRQLA 355 Query: 359 QQLELGGRYASI--VGAPDRVADELESWVADTGIDGYNLTRTVTPESFEDFVELVIPVLQ 416 Q+L G Y+ + VG P +ADE+E W+ G DG+N+ P +DFVE V+P LQ Sbjct: 356 QRL---GGYSGLAFVGTPQIIADEMEKWLVTEGSDGFNIMFPYLPAGLDDFVEKVVPELQ 412 Query: 417 ERGSYKREYAQGTLREKL 434 RG ++R+Y TLRE L Sbjct: 413 RRGIFRRQYEGSTLRENL 430 >AGpT161 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 450 Score = 243 bits (621), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 153/439 (34%), Positives = 230/439 (52%), Gaps = 28/439 (6%) Query: 10 AFNMNCVSHINHGLWTHPRDRSQDYTDIAYWTDLARLLERGKFDGLFLADIVGVYDVY-Q 68 A + +H+ G W P + D A + +AR E K D LF+AD + + D Y Q Sbjct: 4 ALYLEAGTHL--GGWRLPESATSGGVDWALYKTVARRAEAAKLDMLFVADKLSIDDNYGQ 61 Query: 69 GNTDLTLRETIQLPVNDPLMLVPAMAAVTEHLGFGVTANLTYEAPFLFARRMSTLDHLSR 128 D + P +PL + A+ AVT+H+G G T + +Y +P+ AR ++ +DH+S Sbjct: 62 HFADTVKYRLVTRP--EPLTTLAALGAVTDHIGIGGTISSSYASPYAAARMLANIDHISG 119 Query: 129 GRVGWNIVTGYLDSAARAMGLHEQLEHDQRYDRADEFMEVVYKLWEGSWEDGAVLRDRAR 188 GR WN+VT D AR G + H++RY RA EF +V+ KLW+ SWE A++ D+ Sbjct: 120 GRAAWNLVTSVSDGEARNFGREQHFGHEERYLRAIEFADVMGKLWD-SWEADALVLDKKS 178 Query: 189 RVYADPAKVHKIAHHGDYYHVEG-IHLSEPSRQRTPVLYQAGSSGRGQAFGARHAECVFI 247 V+AD K H I H GD++ + G I++ P + R PVL QAG S R Q A++AE +F+ Sbjct: 179 GVFADSTKFHYIDHEGDFFKIRGPINVPRPPQGR-PVLIQAGVSDRFQGIAAQNAEVIFV 237 Query: 248 SSQSKDATRKLVQSIRDGAVREGRDPDAIKIFMGLTVVTGRTEQQAQERYREYARYASPE 307 + R +S ++ V GR +A+K+ G+ V GRT ++A ++ RE PE Sbjct: 238 VHAELERARSFYKSFKEKVVEGGRSENAVKVLPGIVPVVGRTRKEALDKERELKELILPE 297 Query: 308 AGLAHYSAGTGIDFSQYELDEP---IRPAKTNAIESLTKVVTQPELNWTKRKLLQQL--- 361 AGL+ SA D +Q+ + P I T ++ V+ KR + Q++ Sbjct: 298 AGLSFMSASMNFDLAQFPQNAPFPDITDKITGSVGRFQYVI--------KRAIEQKMTVA 349 Query: 362 ELGGRYA------SIVGAPDRVADELESWVADTGIDGYNLTRTVTPESFEDFVELVIPVL 415 E+G YA + VG P+ VA +L W A DG+ + + F+E V+PVL Sbjct: 350 EVGKWYAESLSFFAPVGTPEEVASQLAHWYAQRACDGFVILPPYIRRDEDLFLEGVVPVL 409 Query: 416 QERGSYKREYAQGTLREKL 434 QERG ++REY TLRE L Sbjct: 410 QERGLFRREYPGTTLRETL 428