BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0022.0458.p         (184 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA4661 Non COG                                                         82   6e-16
RSp1201 Non COG                                                        75   9e-14

>PA4661 Non COG
          Length = 173

 Score = 82.0 bits (201), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 70/140 (50%), Gaps = 11/140 (7%)

Query: 37  TGNSTQLVRLGAQFNWGPNWNFWQSNGTHIGGYWDLSLANWRMNHYNNTNDSGNLVDLGL 96
           TG S    RLG  ++W  +W  WQ++   + GYWD     W        ++      L  
Sbjct: 33  TGQSGMTYRLGLSWDWDKSW--WQTSTGRLTGYWDAGYTYWE-----GGDEGAGKHSLSF 85

Query: 97  TPVL--RFQRDDGKGFYGEAGIGVHLFSKLYRNNDKVLSTAFQFGDHIGAGYVFSNGLDL 154
            PV    F  D  K F  EAGIGV  FS   R  D+ L ++  F D IGAG  F+NG  +
Sbjct: 86  APVFVYEFAGDSIKPFI-EAGIGVAAFSGT-RVGDQNLGSSLNFEDRIGAGLKFANGQSV 143

Query: 155 GIRLQHFSNGGIKQPNGGVN 174
           G+R  H+SN G+KQPN G+ 
Sbjct: 144 GVRAIHYSNAGLKQPNDGIE 163


>RSp1201 Non COG
          Length = 187

 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 6/153 (3%)

Query: 35  YGTGNSTQLVRLGAQFNWGPNWNFWQSNGTHIGGYWDLSLANWRMNHYNNTNDSGNLVDL 94
           YG  N   + + G   ++   ++     G  +   W+++L  WR     N     NL + 
Sbjct: 38  YGRDNRHGIEKYGVDIDFDSGFHCGNPQGWFLNLDWEIALGQWRSTKGTNRQ---NLTEF 94

Query: 95  GLTPVLRFQRDDGKGF-YGEAGIGVHLFSKLYRNNDKVLSTAFQFGDHIGAGYVF--SNG 151
           G+TP+ R ++  G    + EAGIG  L S    +++   STAFQF D IG G  F     
Sbjct: 95  GVTPLFRLEKRGGSWVPFIEAGIGPRLLSHTRTSDEHNFSTAFQFSDMIGVGVAFGSRQQ 154

Query: 152 LDLGIRLQHFSNGGIKQPNGGVNFAVARVAYKF 184
             +G R +H SN  IK+PN G +     + Y F
Sbjct: 155 FQVGYRFEHLSNASIKRPNPGTDLNELYLRYTF 187