BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0446.p (203 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2034 [O] COG2370 Hydrogenase/urease accessory protein Rso Ral... 147 2e-35 DRA0317 [O] COG2370 Hydrogenase/urease accessory protein Dra Dei... 132 6e-31 mll4945 Non COG 125 6e-29 PA4894 [O] COG2370 Hydrogenase/urease accessory protein Pae Pseu... 124 1e-28 AGc4126 [O] COG2370 Hydrogenase/urease accessory protein Atu Agr... 106 4e-23 aq_666 [O] COG2370 Hydrogenase/urease accessory protein Aae Aqui... 94 2e-19 >RSc2034 [O] COG2370 Hydrogenase/urease accessory protein Rso Ralstonia solanacearum Length = 205 Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 100/189 (52%), Positives = 121/189 (64%), Gaps = 9/189 (4%) Query: 20 LAAGTALAHPGHPGSAMDASASMAAGFAHPFSGIDHLLAMLAVGLW---AAQNKQRALWV 76 L A A AHPGHPG A S+ AGF HP +G DHLLAM+AVG+W AA+ + ALW Sbjct: 19 LGASVAFAHPGHPGH--TAGGSLLAGFLHPLTGADHLLAMVAVGVWSALAARAVRDALWA 76 Query: 77 LPLAFPLMMVAGALLAFAGLQVPAVETGIAASVAVLGLLIAFAVRMPLWGSTLVVSLFAM 136 P+AF +MV GALL G+ +P VE IAAS+ V GLLIA MP W L+ FA+ Sbjct: 77 -PVAFVALMVTGALLGAGGMALPMVEPMIAASLLVFGLLIATRAAMPRWAGALLCGGFAL 135 Query: 137 FHGYAHGAELPHGSSAAM--YGAGFIAATALLHAAGLGIGLIAGQQMADRVVRIGGVGIA 194 FHGYAHG E P G+ A + AGF AATALLHA G+G GL ++A + R+ GVG+A Sbjct: 136 FHGYAHGMEFPAGAQAMFPSFVAGFAAATALLHAVGIGAGLALKPRLA-WLARLSGVGVA 194 Query: 195 AVGAYLLAA 203 GA LLAA Sbjct: 195 LYGAGLLAA 203 >DRA0317 [O] COG2370 Hydrogenase/urease accessory protein Dra Deinococcus radiodurans Length = 185 Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 92/190 (48%), Positives = 119/190 (62%), Gaps = 8/190 (4%) Query: 11 RLGVLAVTALAAGTALAHPGHPGSAMDASASMAAGFAHPFSGIDHLLAMLAVGLWAAQNK 70 ++ VL+V LA+ +ALAH G +A AAG AHP SG+DHLLAM+AVG+ AA Sbjct: 3 KIRVLSVLLLAS-SALAHSG------QHAAGFAAGVAHPLSGLDHLLAMVAVGVLAAPFG 55 Query: 71 QRALWVLPLAFPLMMVAGALLAFAGLQVPAVETGIAASVAVLGLLIAFAVRMPLWGSTLV 130 +R L V PLAF MV G LL G+ +P VE G+A SV VLGLL+AF R+ L V Sbjct: 56 RRGLLV-PLAFVAAMVLGGLLGIHGVHLPFVEQGVALSVTVLGLLLAFTARLSLPALAAV 114 Query: 131 VSLFAMFHGYAHGAELPHGSSAAMYGAGFIAATALLHAAGLGIGLIAGQQMADRVVRIGG 190 V + +FHG+AHG ELP G SAA + AGF +T LHAAG G+G + + + R + GG Sbjct: 115 VGVMGLFHGHAHGTELPPGLSAAEFFAGFTLSTVGLHAAGYGLGRLGARGVWTRRLVGGG 174 Query: 191 VGIAAVGAYL 200 V +A +G L Sbjct: 175 VALAGIGLLL 184 >mll4945 Non COG Length = 195 Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 70/147 (47%), Positives = 91/147 (61%) Query: 29 PGHPGSAMDASASMAAGFAHPFSGIDHLLAMLAVGLWAAQNKQRALWVLPLAFPLMMVAG 88 P + + ++S AGF HP SG DH+ MLAVGLWAA + +A+W P AF +M+ G Sbjct: 20 PAYAHVGIGTTSSFTAGFMHPLSGPDHMTVMLAVGLWAALKRGKAIWAWPAAFIGVMLGG 79 Query: 89 ALLAFAGLQVPAVETGIAASVAVLGLLIAFAVRMPLWGSTLVVSLFAMFHGYAHGAELPH 148 A L A + VP VE GI ASV LGLL+A AV +P+ ++ LFA+FHG+AHG E P Sbjct: 80 AALGMAHVPVPFVEPGILASVVALGLLVALAVDLPVSAGVAIIGLFALFHGHAHGTEAPE 139 Query: 149 GSSAAMYGAGFIAATALLHAAGLGIGL 175 + Y AGF AT LLHA G+ G+ Sbjct: 140 NAGGLEYMAGFAVATVLLHAVGIAAGM 166 >PA4894 [O] COG2370 Hydrogenase/urease accessory protein Pae Pseudomonas aeruginosa Length = 190 Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 90/177 (50%), Positives = 108/177 (61%), Gaps = 7/177 (3%) Query: 26 LAHPGHPGSAMDASASMAAGFAHPFSGIDHLLAMLAVGLWAAQNKQRALWVLPLAFPLMM 85 AHPGH + AG AHP +G+DHLLAM AVGLWAAQ + A LP F M Sbjct: 20 FAHPGH------GEHGLVAGLAHPLTGLDHLLAMFAVGLWAAQQQGAARLALPCTFVGTM 73 Query: 86 VAGALLAFAGLQVPAVETGIAASVAVLGLLIAFAVRMPLWGSTLVVSLFAMFHGYAHGAE 145 + G LL F GLQ+P +ETGIAASV LGL +A AVR PL + +LFA+ HG AHG E Sbjct: 74 LVGGLLGFEGLQLPFMETGIAASVLALGLCVALAVRPPLPLAMAATALFALAHGVAHGLE 133 Query: 146 LPHGSSAAMYGAGFIAATALLHAAGLGIGLIAGQQMADRVVRIGGVGIAAVGAYLLA 202 LP SS +Y GF+AATA LHAAG + Q A +VR+ G+ A G +LLA Sbjct: 134 LPDLSSPWLYALGFVAATAALHAAGYALVRFL-PQAAAPLVRLAGLASAGAGVWLLA 189 >AGc4126 [O] COG2370 Hydrogenase/urease accessory protein Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 214 Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 72/145 (49%), Positives = 98/145 (67%), Gaps = 8/145 (5%) Query: 37 DASASMAAGFAHPFSGIDHLLAMLAVGLWAAQ-----NKQRALWVLPLAFPLMMVAGALL 91 + S AG +HPF G DH+LAM+AVG+WA+Q N ++ALW++P AF M G L+ Sbjct: 44 EEHGSFMAGVSHPFFGADHILAMVAVGIWASQIASARNDRKALWIVPAAFVGTMAVGFLM 103 Query: 92 AFAGLQVPAVETGIAASVAVLGLLIAFAVRMPLWGSTLVVSLFAMFHGYAHGAELPHGSS 151 A G+++P VE I ASV LGLL+A A R+P + VV FA+FHG+AHG EL GS+ Sbjct: 104 AVYGVELPFVEPAILASVIGLGLLVAMAARLPTAAAAAVVGAFALFHGHAHGGEL--GSA 161 Query: 152 AAM-YGAGFIAATALLHAAGLGIGL 175 A+ +G GF+ ATA+LH AG+ +GL Sbjct: 162 GALQFGIGFMIATAILHLAGIALGL 186 >aq_666 [O] COG2370 Hydrogenase/urease accessory protein Aae Aquifex aeolicus Length = 180 Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 9/169 (5%) Query: 22 AGTALAHPGHPGSAMDASASMAAGFAHPFSGIDHLLAMLAVGLWAAQNKQRALWVLPLAF 81 A A AHPGH +G HP +G+DHL M+AVGL + + ++ L F Sbjct: 11 ASFAFAHPGH----FHGVNPFNSGLIHPLTGLDHLSVMVAVGLLGSYYAGKKAFLPALTF 66 Query: 82 PLMMVAGALLAFAGLQVPAVETGIAASVAVLGLLIAFAVRMPLWGSTLVVSLFAMFHGYA 141 M G++L G+ VP VE+GI SVA++G+L+ FA + L ++ +F + HG A Sbjct: 67 VSFMTLGSILGLLGVSVPFVESGIILSVALMGILL-FAKDLKLSYVLPLIGIFGILHGVA 125 Query: 142 HGAELPHGSSAAMYGAGFIAATALLHAAGLGIGLIAGQQMADRVVRIGG 190 HG E P Y GF+ +TA LH GL+ G+ + +++VR+ G Sbjct: 126 HGYEAPQTLHPVYYVLGFVLSTAALHFT----GLLFGKALKEKLVRVSG 170