BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0022.0406.p         (200 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0273 [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase Rs...   217   2e-56
PA0118 [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase Pae...   112   4e-25
CC0643 Non COG                                                         87   3e-17
AGpA622 [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase At...    67   2e-11

>RSc0273 [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase Rso Ralstonia
           solanacearum
          Length = 201

 Score =  217 bits (552), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 103/201 (51%), Positives = 137/201 (68%), Gaps = 1/201 (0%)

Query: 1   MSTPIDFYFDFSSPYGYFAAVEIDKLAAQHGRDVNWHPILLGPIFKALGTNSLVNIPVKG 60
           M+  IDFYFDFSSPYGYFA+  ++ LA Q+ R   WHPILLG +FK  G   L   P+KG
Sbjct: 1   MNGAIDFYFDFSSPYGYFASTRVEALAQQYNRATAWHPILLGVVFKTTGGAPLAQQPLKG 60

Query: 61  EYSRHDMERTARFHNIFYKAPSHFPIGTQVAARATLWVQQTQPS-KAVELIKTLYSAYFT 119
           +Y+  D ERTARFH I Y+ P+HFP+ TQ AARA LWV       +A+   + +Y A F 
Sbjct: 61  DYAWRDFERTARFHGIDYRKPTHFPLPTQYAARAMLWVHDHHGGDRAIGFAQAVYRALFV 120

Query: 120 EDIDISVVDNVLRIAADLGIDRNALQAALESPELKEQLRQSTEAAGQAGVFGSPFMIVDG 179
           +D++I     V++IA  LGID NAL A   S ++K+QL+   + A   GVFGSP++I+DG
Sbjct: 121 DDVNIGEPAEVMKIADALGIDGNALNAGAGSQQIKDQLKAEIDLAMSRGVFGSPYVIIDG 180

Query: 180 EQFWGFDRFPQLEALLKNGKI 200
           E FWGFDRF Q+EALL++G++
Sbjct: 181 EPFWGFDRFDQIEALLRDGRV 201


>PA0118 [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase Pae
           Pseudomonas aeruginosa
          Length = 195

 Score =  112 bits (281), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 102/191 (53%), Gaps = 8/191 (4%)

Query: 1   MSTPIDFYFDFSSPYGYFAAVEIDKLAAQHGRDVNWHPILLGPIFKALGTNSLVNIPVKG 60
           MS  I+F+FDF SP  Y A  ++ ++AA HG  + W P+LLG +FKA G +S + +P KG
Sbjct: 1   MSKQIEFFFDFGSPTTYLAWTQLPRIAAAHGASIAWRPMLLGGVFKATGNHSPIEVPAKG 60

Query: 61  EYSRHDMERTARFHNIFYKAPSHFPIGTQV---AARATLWVQQTQPSKAVELIKTLYSAY 117
            Y+ HD+ R A+ + +       FPI T      A+  L  +  QP      +K ++ A 
Sbjct: 61  RYTLHDLARYAKRYGVPLAFNPAFPINTLTLMRGAQGYLGGEGFQP-----YLKAVFEAL 115

Query: 118 FTEDIDISVVDNVLRIAADLGIDRNALQAALESPELKEQLRQSTEAAGQAGVFGSPFMIV 177
           +    ++   + V ++ A+ G D +     +   ++KE L+ +TE A + GVFG+P   V
Sbjct: 116 WVRQQNLGKPEVVAQVLAEAGFDPDEFLRLVGDEQVKEGLKATTEEAVRRGVFGAPSFFV 175

Query: 178 DGEQFWGFDRF 188
             + F+G DR 
Sbjct: 176 GDQLFFGQDRL 186


>CC0643 Non COG
          Length = 206

 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 9/200 (4%)

Query: 5   IDFYFDFSSPYGYFAAVEIDKLAAQHGRDVNWHPILLGPIFKALGTNS--LVNIPVKGEY 62
           IDF FDF SP  Y +   + ++AA+ G  V   P LLG IFKA G  +  +    VKG+ 
Sbjct: 10  IDFIFDFGSPNAYLSWKLLPEIAARQGAAVRLIPCLLGGIFKATGNQAPMIAFGGVKGKM 69

Query: 63  SRHDMERTARF---HNIF-YKAPSHFPIGTQVAARATLWVQQTQPSKAVELIKTLYSAYF 118
             ++M  T RF   H +  ++   HFP+ T +  R  +  Q+   ++A   ++ +    +
Sbjct: 70  D-YEMLETRRFIAAHGLTAFRFNPHFPVNTLLLMRGMIAAQRIGVAEAY--LEAMLKGMW 126

Query: 119 TEDIDISVVDNVLRIAADLGIDRNALQAALESPELKEQLRQSTEAAGQAGVFGSPFMIVD 178
            + + +   +  +  A   G+D  AL AA    E+K +L  +TEAA   G FG P   V 
Sbjct: 127 EDGLKLDDPEVFVATANAAGLDGAALLAATGDAEVKAELVANTEAAVARGTFGIPTFFVG 186

Query: 179 GEQFWGFDRFPQLEALLKNG 198
            E F+G +R  Q+EA L  G
Sbjct: 187 EEIFFGKERLGQVEAELAKG 206


>AGpA622 [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 219

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 6/184 (3%)

Query: 7   FYFDFSSPYGYFAAVEIDKLAAQHGRDVNWHPILLGPIFKALGTNSLVNIP-VKGEYSRH 65
           +Y   SSP+ Y    +   L  +H  DV   P     I    G   L + P  + +Y   
Sbjct: 30  YYHALSSPWAYLGGPQFKALVEKHDLDVVVRPTR---IVTENGGVPLRSRPQPRQDYHAV 86

Query: 66  DMER-TARFHNIFYKAPSHFPIGTQVAARATLWVQQTQPSKAVELIKTLYSAYFTEDIDI 124
           +++R   R        P ++P   + +AR  +     Q   A+EL   L  A + E+ D+
Sbjct: 87  ELDRWRKRLGMPLVLKPRYYPTNNEFSARMVI-AADRQGLPALELSHALLRALWAEEQDV 145

Query: 125 SVVDNVLRIAADLGIDRNALQAALESPELKEQLRQSTEAAGQAGVFGSPFMIVDGEQFWG 184
           +  D  + +A  LG+D  AL+A  ++PE+      S   A   GVFG+P  +     +WG
Sbjct: 146 TDPDVRIAVANSLGLDGRALRALEDTPEIMAAWHDSHAEAQSRGVFGTPTWVYRDTLYWG 205

Query: 185 FDRF 188
            DR 
Sbjct: 206 QDRL 209