BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0396.p (384 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0068 [LU] COG0758 Predicted Rossmann fold nucleotide-binding ... 384 e-106 XF0924 [LU] COG0758 Predicted Rossmann fold nucleotide-binding p... 270 3e-72 PA0021 [LU] COG0758 Predicted Rossmann fold nucleotide-binding p... 242 8e-64 NMB0116 [LU] COG0758 Predicted Rossmann fold nucleotide-binding ... 237 4e-62 NMA0158 [LU] COG0758 Predicted Rossmann fold nucleotide-binding ... 230 5e-60 YPO0243 [LU] COG0758 Predicted Rossmann fold nucleotide-binding ... 225 1e-58 STM3405 [LU] COG0758 Predicted Rossmann fold nucleotide-binding ... 225 2e-58 PM1599 [LU] COG0758 Predicted Rossmann fold nucleotide-binding p... 222 1e-57 ECs4151 [LU] COG0758 Predicted Rossmann fold nucleotide-binding ... 219 1e-56 Zsmf [LU] COG0758 Predicted Rossmann fold nucleotide-binding pro... 219 1e-56 >RSc0068 [LU] COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake Rso Ralstonia solanacearum Length = 401 Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust. Identities = 217/377 (57%), Positives = 265/377 (70%), Gaps = 13/377 (3%) Query: 20 DPADLAWWLRLSLAEGVGPATARRLLAAFGLPGQLWQADASAVAAVVSPALAVRPLGAPT 79 DPA+LA WLRL+ G+GP AR+LLAAFGLP +++ +A+A V+ A L P Sbjct: 24 DPAELAAWLRLTETPGIGPVAARQLLAAFGLPQDIFRQSYAALAKVLPERQARALLAEPD 83 Query: 80 PAVRAQIAATLAWLQQPGHAILTLADSRYPPALLEIADPPLLLYLRGDPAWLSAEAVAVV 139 A+ A I T AW +PG+AI TLAD YPP LLE+ DPP LLY +GD + L A AV VV Sbjct: 84 EALAALIERTAAWAAEPGNAIFTLADRGYPPRLLELPDPPTLLYAKGDVSLLRAAAVGVV 143 Query: 140 GSRNATAQGIAHASRFSRELSRAGLTIVSGLALGIDAAAHEGGLDGPGSTVAVIGTGIDI 199 G+R+ATAQG+ +A F++ LS A +TIVSGLALGIDAAAH+G L GPGST+AV+GTG+D+ Sbjct: 144 GARSATAQGLENARAFAQALSAANVTIVSGLALGIDAAAHDGALTGPGSTIAVVGTGLDM 203 Query: 200 VYPRRHEALAARIAAAGCIVSEYPLGTPPLASNFPRRNRLISGLARAVLVVEAAAQSGSL 259 VYP R+ ALA IA AG I+SEYPLG A NFPRRNRLI+GLAR +LVVEAAAQSGSL Sbjct: 204 VYPARNRALAHHIAEAGLILSEYPLGMGARAENFPRRNRLIAGLARGLLVVEAAAQSGSL 263 Query: 260 ITARMAAEQGRDVFAIPGSIHAPLAKGCHQLIRQGAKLVETTQDMLDELPSRQAVRVANP 319 ITAR+AAEQGRDVFAIPGSIH+PLAKGCH LI+QGAKLVET D+LDEL + A Sbjct: 264 ITARLAAEQGRDVFAIPGSIHSPLAKGCHLLIKQGAKLVETAADILDELGWSRTPTPATR 323 Query: 320 SPQS-------------QVEDDAMTSLVMQAMAYDPVDTDTLAARCGLEAAVLAGLLLTL 366 +P++ + A + ++ A+ +DPVD DTL R G AA L+ LL L Sbjct: 324 TPRTAAQAPVPASAPAARPAATAAETALLDALGFDPVDLDTLCERTGQTAANLSAQLLAL 383 Query: 367 ELAGRIELLPGALYRRL 383 ELAG IE PG + RL Sbjct: 384 ELAGHIERQPGGRFLRL 400 >XF0924 [LU] COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake Xfa Xylella fastidiosa 9a5c Length = 387 Score = 270 bits (691), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 168/389 (43%), Positives = 225/389 (57%), Gaps = 18/389 (4%) Query: 7 MPTSTALPDFPDDDPADLAWWLRLSLAEGVGPATARRLLAAFGLPGQLWQADASAVAAVV 66 M +TA+ D D LRL LA G A R+LL G P A +A A Sbjct: 1 MAHATAMASPSHSDSQDTDALLRLVLAGGRS-APRRQLLDYHGTPHAALAAGPNAWRASG 59 Query: 67 SPALAVRPLGAPTPAVRAQIAATLAWLQQPGHAILTLADSRYPPALLEIADPPLLLYLRG 126 + L AP P A+I WL P H +L D YPP L + PPL L++ G Sbjct: 60 CNTMQCTRLVAPDPNAMARIQH---WLATPYHHLLGWHDPDYPPLLRHVPSPPLALFIAG 116 Query: 127 DPAWLSAEAVAVVGSRNATAQGIAHASRFSRELSRAGLTIVSGLALGIDAAAHEGGLDGP 186 +P L ++A+VGSR +A G+ H+ F++ L+ GL I+SG+A GIDA AHE L P Sbjct: 117 NPILLWHASIAIVGSRQPSAGGLDHSYGFAQALAARGLGIISGMAAGIDATAHEAALSIP 176 Query: 187 -GSTVAVIGTGIDIVYPRRHEALAARIAAAGCIVSEYPLGTPPLASNFPRRNRLISGLAR 245 G TVAV+GTG D+ YP RH+ L ARI G ++SEYP GT P A +FP+RNR+I+GLA Sbjct: 177 SGHTVAVLGTGPDVPYPARHKKLYARITTDGAVISEYPPGTQPRAGHFPQRNRIIAGLAL 236 Query: 246 AVLVVEAAAQSGSLITARMAAEQGRDVFAIPGSIHAPLAKGCHQLIRQGAKLVETTQDML 305 LV+EA A+SG+LITAR+AAE GR VFA+PGS+H P+ +GCHQLIRQGA LV+ +L Sbjct: 237 GTLVIEAGARSGALITARLAAEAGRAVFAVPGSLHNPMTRGCHQLIRQGATLVQDIDQIL 296 Query: 306 DEL-----PSRQAVRV--------ANPSPQSQVEDDAMTSLVMQAMAYDPVDTDTLAARC 352 +++ P +R PS + +D + QA+A+DP+ D+L R Sbjct: 297 EDVATLAAPLAHTLRERLDAPSWPVAPSLSTPNSNDPKYHTLWQALAHDPMSMDSLIERT 356 Query: 353 GLEAAVLAGLLLTLELAGRIELLPGALYR 381 GL AA L+ +LLTLEL G++ + G R Sbjct: 357 GLTAATLSSMLLTLELEGKVVVEHGRYTR 385 >PA0021 [LU] COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake Pae Pseudomonas aeruginosa Length = 362 Score = 242 bits (618), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 132/231 (57%), Positives = 162/231 (70%), Gaps = 1/231 (0%) Query: 79 TPAVRAQIAATLAWLQQPGHAILTLADSRYPPALLEIADPPLLLYLRGDPAWLSAEAVAV 138 +PAVR L WL+ +L D YP L E+AD P LLY+ G P L +A+ Sbjct: 62 SPAVREAAGEALRWLEGLRRHLLMWDDPGYPALLAEVADAPPLLYVEGAPETLERPQLAM 121 Query: 139 VGSRNATAQGIAHASRFSRELSRAGLTIVSGLALGIDAAAHEGGLDGPGSTVAVIGTGID 198 VGSR A+ G+ A F+R L++ G I SGLALGID AAHEG L+ G+TVAV+GTG+ Sbjct: 122 VGSRRASPAGLGTARSFARSLAQGGFAITSGLALGIDGAAHEGALEAGGATVAVLGTGLR 181 Query: 199 IVYPRRHEALAARIA-AAGCIVSEYPLGTPPLASNFPRRNRLISGLARAVLVVEAAAQSG 257 +YPRRHEALA RI G +VSE PL +PPL +NFPRRNR+ISGL+ VLVVEA+ SG Sbjct: 182 RLYPRRHEALARRIVEGGGALVSELPLDSPPLPANFPRRNRIISGLSLGVLVVEASPASG 241 Query: 258 SLITARMAAEQGRDVFAIPGSIHAPLAKGCHQLIRQGAKLVETTQDMLDEL 308 SLITAR+AAEQGR+V+AIPGSIH P A+GCHQLIR GA LVE+ +L+ L Sbjct: 242 SLITARLAAEQGREVYAIPGSIHHPGARGCHQLIRDGALLVESVGHVLEAL 292 >NMB0116 [LU] COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake Nme Neisseria meningitidis MC58 Length = 397 Score = 237 bits (604), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 154/387 (39%), Positives = 210/387 (54%), Gaps = 30/387 (7%) Query: 27 WLRLSLAEGVGPATARRLLAAFGLPGQLWQADASAVAAVV--SPALAVRPLGAPTPAVRA 84 WL+L+ +G + L+ FG A A VAA++ AL R Sbjct: 9 WLQLAFTPYIGAESFLLLMRRFGSAQNALSAPAEQVAALIRHKQALEAWRNAEKRALARQ 68 Query: 85 QIAATLAWLQQPGHAILTLADSRYPPALLEIADPPLLLYLRGDPAWLSAEAVAVVGSRNA 144 A L W + G ++ L D +P L + P +L+LRG+ L + A+VGSR+A Sbjct: 69 AAEAALEWEMRDGCRLMLLQDEDFPEMLTQGLTAPPVLFLRGNVQLLHKPSAAIVGSRHA 128 Query: 145 TAQGIAHASRFSRELSRAGLTIVSGLALGIDAAAHEGGLDGPGSTVAVIGTGIDIVYPRR 204 T Q + A F + L G+ +VSG+A GID AAH+G L G T+AV GTGID +YP Sbjct: 129 TPQAMRIAKDFGKSLGGKGIPVVSGMASGIDTAAHQGALQAEGGTIAVWGTGIDRIYPPV 188 Query: 205 HEALAARIAAAGCIVSEYPLGTPPLASNFPRRNRLISGLARAVLVVEAAAQSGSLITARM 264 ++ LA IA G IVSE+P+GT P A NFPRRNRLI+ L++ LVVEAA +SGSLITAR+ Sbjct: 189 NKNLAYEIAEKGLIVSEFPIGTRPYAGNFPRRNRLIAALSQVTLVVEAALESGSLITARL 248 Query: 265 AAEQGRDVFAIPGSIHAPLAKGCHQLIRQGAKLVETTQDMLDELP--------SRQAVRV 316 AAE GR+V A+PGSI P +KGCH+LI+ GAKLVE D+L+E P S ++ Sbjct: 249 AAEMGREVMAVPGSIDNPHSKGCHKLIKDGAKLVECLDDILNECPGLLQNTGASSYSINK 308 Query: 317 ANPS--------------------PQSQVEDDAMTSLVMQAMAYDPVDTDTLAARCGLEA 356 P P + E+ + ++ M +DPV D LA + + A Sbjct: 309 GIPEKRITAVQTASDQLSLPEGKMPSEKTENRPVGGSILDRMGFDPVHPDVLAGQLAMPA 368 Query: 357 AVLAGLLLTLELAGRIELLPGALYRRL 383 A L LL LEL G + +PG Y+R+ Sbjct: 369 ADLYAALLELELDGSVAAMPGGRYQRI 395 >NMA0158 [LU] COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake NmA Neisseria meningitidis Z2491 Length = 395 Score = 230 bits (586), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 152/385 (39%), Positives = 211/385 (54%), Gaps = 28/385 (7%) Query: 27 WLRLSLAEGVGPATARRLLAAFGLPGQLWQADASAVAAVV--SPALAVRPLGAPTPAVRA 84 WL+L+ +G + L+ FG A A VAA++ AL R Sbjct: 9 WLQLAFTPYIGAESFLLLMRRFGSAQNALSAPAEQVAALIRHKQALEAWRNAEKRALARQ 68 Query: 85 QIAATLAWLQQPGHAILTLADSRYPPALLEIADPPLLLYLRGDPAWLSAEAVAVVGSRNA 144 A L W + G ++ L D +P L + P +L+LRG+ L + A+VGSR+A Sbjct: 69 AAEAALEWEMRDGCRLMLLQDEDFPEMLTQGLTAPPVLFLRGNVRLLHKPSAAIVGSRHA 128 Query: 145 TAQGIAHASRFSRELSRAGLTIVSGLALGIDAAAHEGGLDGPGSTVAVIGTGIDIVYPRR 204 T Q + A F + L + +VSG+A GID AAH+G L+ G T+AV GTGID +YP Sbjct: 129 TPQAMRIAKDFGKSLGGQNIPVVSGMASGIDTAAHQGALEAEGGTIAVWGTGIDRIYPPS 188 Query: 205 HEALAARIAAAGCIVSEYPLGTPPLASNFPRRNRLISGLARAVLVVEAAAQSGSLITARM 264 ++ LA IA G IVSE+P+GT P A NFPRRNRLI+ L++ LVVEAA +SGSLITA + Sbjct: 189 NKNLAYEIAEKGLIVSEFPIGTRPYAGNFPRRNRLIAALSQVTLVVEAALESGSLITAGL 248 Query: 265 AAEQGRDVFAIPGSIHAPLAKGCHQLIRQGAKLVETTQDMLDELP--------------- 309 AAE GR+V A+PGSI P +KGCH+LI+ GAKLVE D+L+E P Sbjct: 249 AAEMGREVMAVPGSIDNPHSKGCHKLIKDGAKLVECLDDILNECPGLLQNTGASSYSINK 308 Query: 310 -----SRQAVRVAN-PSPQSQVEDD-----AMTSLVMQAMAYDPVDTDTLAARCGLEAAV 358 R+AV+ A P P +++ + ++ M +DP+ D LA + + AA Sbjct: 309 DTPDTGRRAVQTAYAPPPAAKMPSEAAAGGTAVGGILDKMGFDPIHPDVLAGQLAMPAAD 368 Query: 359 LAGLLLTLELAGRIELLPGALYRRL 383 L LL LEL G + +P Y+R+ Sbjct: 369 LYAALLELELDGSVAAMPSGRYQRI 393 >YPO0243 [LU] COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake Ype Yersinia pestis Length = 373 Score = 225 bits (574), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 151/366 (41%), Positives = 209/366 (57%), Gaps = 24/366 (6%) Query: 27 WLRLSLAEGVG----PATARRLLAAFGL-PGQLWQADASAVAAVVSPALAVRPLGAPTPA 81 WLR++ +G+G A A+RLLA+ + PG+L AA + +P Sbjct: 7 WLRMTQVKGLGVVKRSALAKRLLASGDIHPGRL--------AAYGLDSQQCHQFAQLSPR 58 Query: 82 VRAQIAATLAWLQQPGHAILTLADSRYPPALLEIADPPLLLYLRGDPAWLSAEAVAVVGS 141 IA TL WL P H +LT + YPP L+ IA PL+L++ G+ L +A+VGS Sbjct: 59 Y---IADTLEWLSDPNHHLLTYGEPGYPPRLVHIAGAPLVLFVSGELDVLYRPQIAMVGS 115 Query: 142 RNATAQGIAHASRFSRELSRAGLTIVSGLALGIDAAAHEGGLDGPGSTVAVIGTGIDIVY 201 R+ + G F+ EL+R GL I SGLA+GID H+ L+ G T+AV+G+G++ +Y Sbjct: 116 RHFSHYGEQWGRYFASELARTGLVITSGLAVGIDGICHQAALNIQGRTIAVLGSGLENIY 175 Query: 202 PRRHEALAARIA-AAGCIVSEYPLGTPPLASNFPRRNRLISGLARAVLVVEAAAQSGSLI 260 P+RH LA I G +VSE+ P+A++FPRRNR+ISGL+ AVLVVEA +SGSLI Sbjct: 176 PQRHSRLAKEIEYQGGALVSEFLTTALPIAAHFPRRNRIISGLSDAVLVVEATLKSGSLI 235 Query: 261 TARMAAEQGRDVFAIPGSIHAPLAKGCHQLIRQGAKLVETTQDMLDELP-SRQAV----R 315 TAR A +QGRDVFA+PG + + ++G H LI+QGA L + +D+ +++ S Q + Sbjct: 236 TARYAMDQGRDVFALPGPLGSASSEGTHWLIQQGAYLATSVKDVSEQVSGSLQWLSLPEE 295 Query: 316 VANPSPQSQVEDDAMTSLVMQAMAYDPVDTDTLAARCGLEAAVLAGLLLTLELAGRIELL 375 V SPQ QVE L PV D +A R G +A LL LELAG I + Sbjct: 296 VIISSPQEQVELPFADVLANVGDEVTPV--DVVAERAGQPVQDIASKLLELELAGWIAAV 353 Query: 376 PGALYR 381 PG R Sbjct: 354 PGGYVR 359 >STM3405 [LU] COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake Sty Salmonella typhimurium LT2 Length = 374 Score = 225 bits (573), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 134/298 (44%), Positives = 175/298 (58%), Gaps = 5/298 (1%) Query: 89 TLAWLQQPGHAILTLADSRYPPALLEIADPPLLLYLRGDPAWLSAEAVAVVGSRNATAQG 148 TL WL+ P H L YPP L I D P +++ GDPA L +AVVGSR+ + G Sbjct: 63 TLRWLELPQHHFLCADSEIYPPQLRAIDDYPGAIFIDGDPACLHTCQLAVVGSRSHSWYG 122 Query: 149 IAHASRFSRELSRAGLTIVSGLALGIDAAAHEGGLDGPGSTVAVIGTGIDIVYPRRHEAL 208 L+++GLTI SGLA GID AH + G +VAV+G G+ +YPRRH L Sbjct: 123 ERWGRLLCESLAKSGLTITSGLARGIDGVAHNAAVSMGGKSVAVLGNGLAKIYPRRHAML 182 Query: 209 AAR-IAAAGCIVSEYPLGTPPLASNFPRRNRLISGLARAVLVVEAAAQSGSLITARMAAE 267 A IA G +VSE+PL TPPL +FPRRNR+ISGL++ VLV+EAA +SGSL+TAR A E Sbjct: 183 AENLIATGGAVVSEFPLSTPPLPQHFPRRNRIISGLSKGVLVIEAALRSGSLVTARCALE 242 Query: 268 QGRDVFAIPGSIHAPLAKGCHQLIRQGAKLVETTQDMLDELPS--RQAVRVANPSPQSQV 325 QGRDVFA+PG I +P ++G H LI+QGA LV T +D+L+ L A S S Sbjct: 243 QGRDVFALPGPIGSPGSEGTHWLIKQGATLVTTPEDILENLQYGLHWLPTTAENSLYSLN 302 Query: 326 EDDAMTSL--VMQAMAYDPVDTDTLAARCGLEAAVLAGLLLTLELAGRIELLPGALYR 381 +D+A ++ + + D +A R G + LL LELAG I +PG R Sbjct: 303 QDEAALPFPELLANVGDEVTPVDVVAERAGQPVPAVVAQLLELELAGWIAAVPGGYVR 360 >PM1599 [LU] COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake Pmu Pasteurella multocida Length = 373 Score = 222 bits (566), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 129/333 (38%), Positives = 189/333 (56%), Gaps = 20/333 (6%) Query: 37 GPATARRLLAAFGLPGQLWQADASAVAAVVSPALAVRPLGAPTPAVRAQIAATLAWLQQP 96 G +RLL P +L + D A + A ++ P I LAW+ + Sbjct: 18 GSLAIQRLLEHVS-PAELMEYDTKAFQQIGWTAQQIQRWFTPE---NRYIDPALAWVNEQ 73 Query: 97 GHAILTLADSRYPPALLEIADPPLLLYLRGDPAWLSAEAVAVVGSRNATAQGIAHASRFS 156 H I+ D YPP L + PL+L+++G+ A LSA+ VA+VGSR+ + G A+ F+ Sbjct: 74 QH-IVDWFDPHYPPLLKQTEGAPLVLFVKGEVATLSAQQVAIVGSRHCSRYGEYWANYFA 132 Query: 157 RELSRAGLTIVSGLALGIDAAAHEGGLDGPGSTVAVIGTGIDIVYPRRHEALAARI-AAA 215 +L+ A + + SGLALGID +H+ +D G T+AV+G+G++++YP++H LA +I Sbjct: 133 TQLAYADIVVTSGLALGIDGFSHQAVVDIHGKTIAVLGSGLEVIYPKKHRGLAEKIIEHQ 192 Query: 216 GCIVSEYPLGTPPLASNFPRRNRLISGLARAVLVVEAAAQSGSLITARMAAEQGRDVFAI 275 G +VSE+ PP+A NFPRRNR+ISGL+ LV+EA+ SGSLITAR A EQ RDVFA+ Sbjct: 193 GALVSEFLPFQPPVAENFPRRNRIISGLSLGTLVIEASEHSGSLITARYALEQNRDVFAL 252 Query: 276 PGSIHAPLAKGCHQLIRQGAKLVETTQDMLDELPSRQ-----AVRVANPSPQSQVEDDAM 330 PG I ++GCH+LI+QGA LVE+ QD+L+ L A+ + QV D + Sbjct: 253 PGQIQHGFSQGCHKLIKQGAILVESIQDILEHLSPYSHCAMPALSHTENAFSQQVTDTST 312 Query: 331 TSL---------VMQAMAYDPVDTDTLAARCGL 354 + + + Y PV D LA + L Sbjct: 313 INTARITPEHPELYAQIGYMPVSIDVLAQQVNL 345 >ECs4151 [LU] COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake Ecs Escherichia coli O157:H7 Length = 374 Score = 219 bits (557), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 140/336 (41%), Positives = 191/336 (56%), Gaps = 11/336 (3%) Query: 55 WQADASAVAAVV--SPALAVRPLGAPTPAVRAQIAATLAWLQQPGHAILTLADSRYPPAL 112 W A S + AVV L +R R I ++L WL+QP H ++ YPP L Sbjct: 27 WLARQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQL 86 Query: 113 LEIADPPLLLYLRGDPAWLSAEAVAVVGSRNATAQGIAHASRFSRELSRAGLTIVSGLAL 172 L D P L++ G+ L + +AVVGSR + G F L++ G+TI SGLA Sbjct: 87 LATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLAKHGVTITSGLAR 146 Query: 173 GIDAAAHEGGLDGPGSTVAVIGTGIDIVYPRRHEALAARI-AAAGCIVSEYPLGTPPLAS 231 GID AH+ L G ++AV+G G++ ++PRRH LAA + G +VSE+PL PPLA Sbjct: 147 GIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAY 206 Query: 232 NFPRRNRLISGLARAVLVVEAAAQSGSLITARMAAEQGRDVFAIPGSIHAPLAKGCHQLI 291 NFPRRNR+ISGL++ VLVVEAA +SGSL+TAR A EQGR+VFA+PG I P ++G H LI Sbjct: 207 NFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLI 266 Query: 292 RQGAKLVETTQDMLDELPSRQAVRVANPSPQSQV-----EDDAMTSLVMQAMAYDPVD-T 345 +QGA LV +++L+ L + + +P++ ED A+ + A D V Sbjct: 267 KQGAILVTEPEEILENL--QFGLHWLPDAPENSFYSPDQEDVALPFPELLANVGDEVTPV 324 Query: 346 DTLAARCGLEAAVLAGLLLTLELAGRIELLPGALYR 381 D +A R G + LL LELAG I +PG R Sbjct: 325 DVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 >Zsmf [LU] COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake EcZ Escherichia coli O157:H7 EDL933 Length = 374 Score = 219 bits (557), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 140/336 (41%), Positives = 191/336 (56%), Gaps = 11/336 (3%) Query: 55 WQADASAVAAVV--SPALAVRPLGAPTPAVRAQIAATLAWLQQPGHAILTLADSRYPPAL 112 W A S + AVV L +R R I ++L WL+QP H ++ YPP L Sbjct: 27 WLARQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQL 86 Query: 113 LEIADPPLLLYLRGDPAWLSAEAVAVVGSRNATAQGIAHASRFSRELSRAGLTIVSGLAL 172 L D P L++ G+ L + +AVVGSR + G F L++ G+TI SGLA Sbjct: 87 LATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLAKHGVTITSGLAR 146 Query: 173 GIDAAAHEGGLDGPGSTVAVIGTGIDIVYPRRHEALAARI-AAAGCIVSEYPLGTPPLAS 231 GID AH+ L G ++AV+G G++ ++PRRH LAA + G +VSE+PL PPLA Sbjct: 147 GIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAY 206 Query: 232 NFPRRNRLISGLARAVLVVEAAAQSGSLITARMAAEQGRDVFAIPGSIHAPLAKGCHQLI 291 NFPRRNR+ISGL++ VLVVEAA +SGSL+TAR A EQGR+VFA+PG I P ++G H LI Sbjct: 207 NFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLI 266 Query: 292 RQGAKLVETTQDMLDELPSRQAVRVANPSPQSQV-----EDDAMTSLVMQAMAYDPVD-T 345 +QGA LV +++L+ L + + +P++ ED A+ + A D V Sbjct: 267 KQGAILVTEPEEILENL--QFGLHWLPBAPENSFYSPDQEDVALPFPELLANVGDEVTPV 324 Query: 346 DTLAARCGLEAAVLAGLLLTLELAGRIELLPGALYR 381 D +A R G + LL LELAG I +PG R Sbjct: 325 DVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360