BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0387.p (122 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3265 [L] COG0792 Predicted endonuclease distantly related to ... 117 5e-27 PA4424 [L] COG0792 Predicted endonuclease distantly related to a... 108 2e-24 STM3265 [L] COG0792 Predicted endonuclease distantly related to ... 108 3e-24 YPO3549 [L] COG0792 Predicted endonuclease distantly related to ... 108 4e-24 yraN [L] COG0792 Predicted endonuclease distantly related to arc... 107 5e-24 ZyraN [L] COG0792 Predicted endonuclease distantly related to ar... 106 1e-23 ECs4029 [L] COG0792 Predicted endonuclease distantly related to ... 106 1e-23 VC0580 [L] COG0792 Predicted endonuclease distantly related to a... 97 8e-21 NMA0341 [L] COG0792 Predicted endonuclease distantly related to ... 89 3e-18 NMB2089 [L] COG0792 Predicted endonuclease distantly related to ... 87 7e-18 >RSc3265 [L] COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase Rso Ralstonia solanacearum Length = 130 Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 58/105 (55%), Positives = 79/105 (75%), Gaps = 5/105 (4%) Query: 21 QQALTHLRQQGLQLLERNYRCQGGEIDLIMRE-GDTVVFVEVRARASAS---YGGAAASV 76 +AL +L+ +GL ++ RNYRC+ GEIDL+MR+ T+VFVEVRAR + S +GGAAASV Sbjct: 22 DRALRYLQARGLSVIARNYRCKTGEIDLVMRDVAGTLVFVEVRARVARSAQRFGGAAASV 81 Query: 77 TPAKQRRLILAAQRWLQAQAG-TPPCRFDVVTLDGQQLQWLRNAI 120 TPAKQRRLI AA+ +L G P CRFDV+ +DG +++W+R+A Sbjct: 82 TPAKQRRLIAAAEDFLAGHPGEVPACRFDVIAIDGTRIEWMRDAF 126 >PA4424 [L] COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase Pae Pseudomonas aeruginosa Length = 125 Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/123 (48%), Positives = 84/123 (68%), Gaps = 8/123 (6%) Query: 8 SRTSRQRTGEAAEQQALTHLRQQGLQLLERNYRCQGGEIDLIMREGDTVVFVEVRARASA 67 R S + G AE+ A HLR+QGL L +N+ C+ GE+DL+M +GDTVVFVEVR+R Sbjct: 3 DRESSRDKGRQAEELACAHLRRQGLATLGKNWTCRRGELDLVMLDGDTVVFVEVRSRRHR 62 Query: 68 SYGGAAASVTPAKQRRLILAAQRWLQAQA--GTPPCRFDVVTL---DGQ---QLQWLRNA 119 ++GGA S+ K++RLIL+A+ +LQ +A PCRFDVVT+ DGQ +L W++NA Sbjct: 63 AWGGALESIDARKRQRLILSAELFLQQEARWAKRPCRFDVVTVDTSDGQSPPRLDWIQNA 122 Query: 120 IEA 122 +A Sbjct: 123 FDA 125 >STM3265 [L] COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase Sty Salmonella typhimurium LT2 Length = 131 Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 56/114 (49%), Positives = 74/114 (64%), Gaps = 3/114 (2%) Query: 11 SRQRTGEAAEQQALTHLRQQGLQLLERNYRCQGGEIDLIMREGDTVVFVEVRARASASYG 70 +R++ G+A E A L +GL+ + N R +GGEIDLIMR+G T VFVEVR R S YG Sbjct: 15 TRKQAGDAWEAAARRWLESKGLRFIAANVRERGGEIDLIMRDGKTTVFVEVRYRRSGLYG 74 Query: 71 GAAASVTPAKQRRLILAAQRWLQAQAG---TPPCRFDVVTLDGQQLQWLRNAIE 121 GAAASVT +KQ +L+ A+ WL Q G T CRFDV+ G +++W R+A Sbjct: 75 GAAASVTRSKQHKLLHTARLWLARQNGSFDTVDCRFDVLAFTGNEIEWFRDAFN 128 >YPO3549 [L] COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase Ype Yersinia pestis Length = 117 Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 60/114 (52%), Positives = 71/114 (62%), Gaps = 3/114 (2%) Query: 11 SRQRTGEAAEQQALTHLRQQGLQLLERNYRCQGGEIDLIMREGDTVVFVEVRARASASYG 70 S++ TG E A HL + GL N +GGEIDLIMR+GD VFVEVR R + +G Sbjct: 2 SQRDTGAHYENLARRHLERAGLVFQAANVAFRGGEIDLIMRDGDAWVFVEVRFRRNDLFG 61 Query: 71 GAAASVTPAKQRRLILAAQRWLQ---AQAGTPPCRFDVVTLDGQQLQWLRNAIE 121 GAAAS+TP KQ+RL LAA WL A T CRFDVV + G QL+WL NA Sbjct: 62 GAAASITPRKQQRLHLAAAVWLAQRGASFATTSCRFDVVAITGNQLEWLPNAFN 115 >yraN [L] COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase Eco Escherichia coli K12 Length = 131 Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 74/111 (66%), Gaps = 3/111 (2%) Query: 13 QRTGEAAEQQALTHLRQQGLQLLERNYRCQGGEIDLIMREGDTVVFVEVRARASASYGGA 72 ++TG+A E QA L +GL+ + N +GGEIDLIMREG T +FVEVR R SA YGGA Sbjct: 17 KQTGDAWEAQARRWLEGKGLRFIAANVNERGGEIDLIMREGRTTIFVEVRYRRSALYGGA 76 Query: 73 AASVTPAKQRRLILAAQRWLQAQAG---TPPCRFDVVTLDGQQLQWLRNAI 120 AASVT +KQ +L+ A+ WL G T CRFDVV G +++W+++A Sbjct: 77 AASVTRSKQHKLLQTARLWLARHNGSFDTVDCRFDVVAFTGNEVEWIKDAF 127 >ZyraN [L] COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase EcZ Escherichia coli O157:H7 EDL933 Length = 131 Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 3/111 (2%) Query: 13 QRTGEAAEQQALTHLRQQGLQLLERNYRCQGGEIDLIMREGDTVVFVEVRARASASYGGA 72 ++TG+A E QA L +GL+ + N +GGEIDLIMREG T VFVEVR R SA YGGA Sbjct: 17 KQTGDAWEVQARRWLEGKGLRFVAANVNERGGEIDLIMREGRTTVFVEVRYRRSALYGGA 76 Query: 73 AASVTPAKQRRLILAAQRWLQAQAG---TPPCRFDVVTLDGQQLQWLRNAI 120 AASVT +KQ +L+ A+ WL G T CRFDVV G +++W+++ Sbjct: 77 AASVTRSKQHKLLQTARLWLARHNGSFDTVDCRFDVVAFTGNEVEWIKDTF 127 >ECs4029 [L] COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase Ecs Escherichia coli O157:H7 Length = 131 Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 3/111 (2%) Query: 13 QRTGEAAEQQALTHLRQQGLQLLERNYRCQGGEIDLIMREGDTVVFVEVRARASASYGGA 72 ++TG+A E QA L +GL+ + N +GGEIDLIMREG T VFVEVR R SA YGGA Sbjct: 17 KQTGDAWEVQARRWLEGKGLRFVAANVNERGGEIDLIMREGRTTVFVEVRYRRSALYGGA 76 Query: 73 AASVTPAKQRRLILAAQRWLQAQAG---TPPCRFDVVTLDGQQLQWLRNAI 120 AASVT +KQ +L+ A+ WL G T CRFDVV G +++W+++ Sbjct: 77 AASVTRSKQHKLLQTARLWLARHNGSFDTVDCRFDVVAFTGNEVEWIKDTF 127 >VC0580 [L] COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase Vch Vibrio cholerae Length = 122 Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 5/110 (4%) Query: 16 GEAAEQQALTHLRQQGLQLLERNYRCQGGEIDLIMREGDTVVFVEVRARASASYGGAAAS 75 G EQ A +LR+QGL L+ +N + GE+DLIMR+G+T+VFVEVR R + +G AA + Sbjct: 10 GNHYEQMAADYLRRQGLTLVTQNVNYRFGELDLIMRDGNTLVFVEVRYRNNTQHGHAAET 69 Query: 76 VTPAKQRRLILAAQRWLQA---QAGTPPCRFDVVTLD--GQQLQWLRNAI 120 VT K+ RLI AA W+ A + + RFDV+ + GQ + WL+NAI Sbjct: 70 VTRTKRARLIKAANCWMLANKMNSHSADFRFDVIAIHQQGQHIDWLKNAI 119 >NMA0341 [L] COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase NmA Neisseria meningitidis Z2491 Length = 115 Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 45/108 (41%), Positives = 68/108 (62%), Gaps = 2/108 (1%) Query: 13 QRTGEAAEQQALTHLRQQGLQLLERNYRCQGGEIDLIMREGDTVVFVEVRARASASYGGA 72 + GEA E AL L+ QG LL RN+ C GEIDLI++ G ++FVEV+ R + +GGA Sbjct: 5 HKQGEAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKNGGMILFVEVKYRKNRQFGGA 64 Query: 73 AASVTPAKQRRLILAAQRWLQAQAGTP-PCRFDVVTLDGQQ-LQWLRN 118 A S++P+K +L + + +LQ T PCR D V ++G + +W++N Sbjct: 65 AYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIEGSRPPEWIQN 112 >NMB2089 [L] COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase Nme Neisseria meningitidis MC58 Length = 115 Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 44/108 (40%), Positives = 67/108 (62%), Gaps = 2/108 (1%) Query: 13 QRTGEAAEQQALTHLRQQGLQLLERNYRCQGGEIDLIMREGDTVVFVEVRARASASYGGA 72 + GEA E AL L+ QG LL RN+ C GEIDLI++ G ++FVEV+ R + +GG Sbjct: 5 HKQGEAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKNGGMILFVEVKYRKNRQFGGV 64 Query: 73 AASVTPAKQRRLILAAQRWLQAQAGTP-PCRFDVVTLDGQQ-LQWLRN 118 A S++P+K +L + + +LQ T PCR D V ++G + +W++N Sbjct: 65 AYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIEGSRPPEWIQN 112