BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0381.p (531 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0060 [M] COG1792 Cell shape-determining protein Rso Ralstonia... 267 5e-71 PA4480 [M] COG1792 Cell shape-determining protein Pae Pseudomona... 173 1e-42 HI0038 [M] COG1792 Cell shape-determining protein Hin Haemophilu... 172 1e-42 YPO3666 [M] COG1792 Cell shape-determining protein Ype Yersinia ... 172 3e-42 PM1956 [M] COG1792 Cell shape-determining protein Pmu Pasteurell... 164 7e-40 STM3373 [M] COG1792 Cell shape-determining protein Sty Salmonell... 163 8e-40 mreC [M] COG1792 Cell shape-determining protein Eco Escherichia ... 163 8e-40 ZmreC [M] COG1792 Cell shape-determining protein EcZ Escherichia... 163 1e-39 ECs4122 [M] COG1792 Cell shape-determining protein Ecs Escherich... 163 1e-39 VC0416 [M] COG1792 Cell shape-determining protein Vch Vibrio cho... 162 2e-39 >RSc0060 [M] COG1792 Cell shape-determining protein Rso Ralstonia solanacearum Length = 346 Score = 267 bits (682), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 141/276 (51%), Positives = 199/276 (72%) Query: 4 PPLFKQGASARVRVTVFALLSIVMLVVDARMHVLGTIRQALATALYPFQTVAMMPRDAAT 63 PPLFKQG SA R+ L++ +LV+DAR+ VLG +RQ ++ LYP + V ++PRD A Sbjct: 6 PPLFKQGPSATARLVALIALALALLVIDARLSVLGVVRQVVSVVLYPVERVVLIPRDTAR 65 Query: 64 SITDSLVALNTLQKENRELRQQQIVNAQLLQQERLLAAENAQLRKLLEMQQKVPVKSIVG 123 ++ D + L +NR LR+ + AQ + L AEN LR LL ++Q V ++ Sbjct: 66 ALLDYTQSSTRLATDNRTLRESAVAQAQQSLRASQLEAENRNLRTLLNLKQHAAVSTVAA 125 Query: 124 EILYDARDPFTRKIILNRGSQQGVEAGQPVIDEVGIVGQVTRVFPFTSEVTLLTDKDQAI 183 E+LY+ARDP+T++I+++RG++ GV AG PVID+ G+VGQVTRV F ++VTLLTDKDQAI Sbjct: 126 EVLYEARDPYTQRIVIDRGTRDGVRAGYPVIDDRGVVGQVTRVSLFEAQVTLLTDKDQAI 185 Query: 184 PVQVLRNGLRSVAYGRGQTGALDLRFMPANADIQKGDMLVTSGIDGIYPPGLAVASVALV 243 PV+V+RNGLRSVA+G + GALDLRFM A+AD+Q+GD+LVTSG+DG+YP GL VA +A + Sbjct: 186 PVEVVRNGLRSVAFGGARPGALDLRFMAASADLQQGDLLVTSGLDGVYPAGLPVARIAQI 245 Query: 244 ETRSADSFARIVCRPLAGIDRHRQLLILLVEQNLPP 279 E ++ +F+R++C P+AGI +R LLI+ E PP Sbjct: 246 ERKADTAFSRVICEPVAGIRSNRHLLIVKYESGFPP 281 >PA4480 [M] COG1792 Cell shape-determining protein Pae Pseudomonas aeruginosa Length = 330 Score = 173 bits (438), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 99/266 (37%), Positives = 155/266 (58%) Query: 19 VFALLSIVMLVVDARMHVLGTIRQALATALYPFQTVAMMPRDAATSITDSLVALNTLQKE 78 + A+LS+ ++VVDAR L +R L L PF +A MP A + D + + L E Sbjct: 1 MLAVLSVSLMVVDARFDYLEPVRSKLGMVLTPFYGLAEMPVRAWEGVRDQFSSRSELIAE 60 Query: 79 NRELRQQQIVNAQLLQQERLLAAENAQLRKLLEMQQKVPVKSIVGEILYDARDPFTRKII 138 N L+ + ++ + +Q+ L +N +LR+LL V K +V E++ +PFT++I+ Sbjct: 61 NERLKAESLLMQRRVQKLAALTEQNVRLRELLNSAALVDDKVLVSELIGVDPNPFTQRIM 120 Query: 139 LNRGSQQGVEAGQPVIDEVGIVGQVTRVFPFTSEVTLLTDKDQAIPVQVLRNGLRSVAYG 198 +++G GV GQPV+D G++GQV V P+T+ V LLTD +IPVQV RNGLR++A G Sbjct: 121 IDKGENDGVFVGQPVLDASGLMGQVVEVMPYTARVLLLTDTTHSIPVQVNRNGLRAIAVG 180 Query: 199 RGQTGALDLRFMPANADIQKGDMLVTSGIDGIYPPGLAVASVALVETRSADSFARIVCRP 258 G L+LR++ ADI++GD+LV+SG+ +P G VA+V V S FA + P Sbjct: 181 TGNPERLELRYVADTADIKEGDLLVSSGLGQRFPAGYPVATVKEVIHDSGQPFAVVRAVP 240 Query: 259 LAGIDRHRQLLILLVEQNLPPRPQPD 284 A ++R R +L++ + P + D Sbjct: 241 TAKMNRSRYVLLVFSDSRTPEQRAND 266 >HI0038 [M] COG1792 Cell shape-determining protein Hin Haemophilus influenzae Length = 351 Score = 172 bits (437), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 117/321 (36%), Positives = 176/321 (54%), Gaps = 8/321 (2%) Query: 3 IPPLFKQGASARVRVTVFALLSIVMLVVDARMHVLGTIRQALATALYPFQTVAMMPRDAA 62 + P+F + +R+ + SI +++ D R + R A+ TA+ +A PR Sbjct: 1 MKPIFGKAPPLGIRLLIAIFASIALILADGRNSSITKARSAMETAIGGLYYLANSPRSIL 60 Query: 63 TSITDSLVALNTLQKENRELRQQQI-VNAQLLQQERLLAAENAQLRKLLEMQQKVPVKSI 121 I+++LV N LQ EN+ LRQQ + NA LL ++L EN +LR LL + Sbjct: 61 DGISENLVDTNKLQIENKVLRQQLLEKNADLLLLDQL-KVENQRLRLLLNSPLRTDEYKK 119 Query: 122 VGEILYDARDPFTRKIILNRGSQQGVEAGQPVIDEVGIVGQVTRVFPFTSEVTLLTDKDQ 181 + E+L D + ++I++N+G + G GQPVIDE G++GQ+ V TS V LLTD Sbjct: 120 IAEVLTAETDIYRQQIVINQGKKDGAYVGQPVIDEKGVIGQIISVGENTSRVLLLTDVTH 179 Query: 182 AIPVQVLRNGLRSVAYGRGQTGALDLRFMPANADIQKGDMLVTSGIDGIYPPGLAVASVA 241 +IPVQVLRN +R +A G G T L L +P + DI+KGD+LVTSG+ G + G VA V Sbjct: 180 SIPVQVLRNDVRVIASGTGHTDELSLDNVPRSVDIEKGDLLVTSGLGGRFLEGYPVAVVQ 239 Query: 242 LVETRSADSFARIVCRPLAGIDRHRQLLILLVEQNLPPRPQPDVVDEKSAKLFKRRLRDS 301 V S++ FA + +PLA ++R R +L LL NL + E+ L ++RL Sbjct: 240 SVSRDSSNYFAIVKAKPLALLERLRYVL-LLWPSNLDISKVKSISPEEVRNLVQKRL--- 295 Query: 302 TRDTSADDANATPKDKPAEER 322 ++ A++AN K P E+ Sbjct: 296 --ESQANEANYRVKKTPLTEK 314 >YPO3666 [M] COG1792 Cell shape-determining protein Ype Yersinia pestis Length = 331 Score = 172 bits (435), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 94/258 (36%), Positives = 152/258 (58%) Query: 3 IPPLFKQGASARVRVTVFALLSIVMLVVDARMHVLGTIRQALATALYPFQTVAMMPRDAA 62 + P+F +G S ++R+ + +IV+++ D+R+ IR + TA+ PF +A PR Sbjct: 1 MKPIFSRGPSLQLRLFFAIIAAIVLVIADSRLGTFVKIRTYMDTAVSPFYFLANGPRKIL 60 Query: 63 TSITDSLVALNTLQKENRELRQQQIVNAQLLQQERLLAAENAQLRKLLEMQQKVPVKSIV 122 +++D+L L+ ENR LRQ+ ++ LQ EN +LR+LL + + +V Sbjct: 61 DNVSDTLATREQLELENRALRQELLLKNTDLQLLGQFKQENNRLRELLGSPLRQDEQKMV 120 Query: 123 GEILYDARDPFTRKIILNRGSQQGVEAGQPVIDEVGIVGQVTRVFPFTSEVTLLTDKDQA 182 +++ DP++ +++++GS GV GQPVI + G+VGQV V FTS V L+ D A Sbjct: 121 TQVMSSGTDPYSDHVVIDKGSNSGVYEGQPVISDRGVVGQVVAVSKFTSRVLLICDASHA 180 Query: 183 IPVQVLRNGLRSVAYGRGQTGALDLRFMPANADIQKGDMLVTSGIDGIYPPGLAVASVAL 242 +P+QVLRN +R +A G G + L L +P+N DI+ GD+LVTSG+ G +P G VA V+ Sbjct: 181 LPIQVLRNDIRVIAAGSGCSDDLLLEHLPSNTDIRVGDVLVTSGLGGRFPEGYPVAVVSS 240 Query: 243 VETRSADSFARIVCRPLA 260 V+ + ++ I RP A Sbjct: 241 VKVDNQRAYTVIQARPTA 258 >PM1956 [M] COG1792 Cell shape-determining protein Pmu Pasteurella multocida Length = 349 Score = 164 bits (414), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 103/271 (38%), Positives = 152/271 (56%), Gaps = 2/271 (0%) Query: 3 IPPLFKQGASARVRVTVFALLSIVMLVVDARMHVLGTIRQALATALYPFQTVAMMPRDAA 62 + P+F + +R+ + L SI ++V D + + + R + TA+ +A PR Sbjct: 1 MKPIFGKAPPLGLRLILAILASIALIVSDGQSNAMIKARSIMETAVGGLYYLANTPRTVL 60 Query: 63 TSITDSLVALNTLQKENRELRQQ-QIVNAQLLQQERLLAAENAQLRKLLEMQQKVPVKSI 121 ++D+LV N LQ ENR LR Q + NA LL ++L EN +LR LL + Sbjct: 61 DGVSDNLVDTNKLQIENRVLRDQLREKNADLLLLDQL-KVENQRLRLLLNSPLRTDEYKK 119 Query: 122 VGEILYDARDPFTRKIILNRGSQQGVEAGQPVIDEVGIVGQVTRVFPFTSEVTLLTDKDQ 181 + E+L D + +++++N+G + G GQP+IDE GIVGQ+ V TS V LLTD Sbjct: 120 IAEVLTAETDVYRKQVVINQGQRDGAYVGQPIIDEKGIVGQLISVGENTSRVLLLTDVTH 179 Query: 182 AIPVQVLRNGLRSVAYGRGQTGALDLRFMPANADIQKGDMLVTSGIDGIYPPGLAVASVA 241 +IPVQVLRN +R +A G G+ L L +P + DI KGD+LVTSG+ G + G VA V Sbjct: 180 SIPVQVLRNDVRLIASGTGRNDELSLDHVPRSVDIVKGDLLVTSGLGGRFLEGYPVAIVE 239 Query: 242 LVETRSADSFARIVCRPLAGIDRHRQLLILL 272 V + FA + +PLA I+R R +L+L Sbjct: 240 SVSRDGQNYFATVTAKPLASIERLRYVLLLW 270 >STM3373 [M] COG1792 Cell shape-determining protein Sty Salmonella typhimurium LT2 Length = 350 Score = 163 bits (413), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 94/257 (36%), Positives = 155/257 (60%) Query: 5 PLFKQGASARVRVTVFALLSIVMLVVDARMHVLGTIRQALATALYPFQTVAMMPRDAATS 64 P+F +G S ++R+ + L+++ +++ D+R+ IR + TA+ PF ++ PR+ S Sbjct: 3 PIFSRGPSLQIRLILAVLVALGVIIADSRLGTFSQIRTYMDTAVSPFYFISNGPRELLDS 62 Query: 65 ITDSLVALNTLQKENRELRQQQIVNAQLLQQERLLAAENAQLRKLLEMQQKVPVKSIVGE 124 ++ +L + + L+ ENR LRQ+ ++ L ENA+LR+LL + + +V + Sbjct: 63 VSQTLASRDQLELENRALRQELLLKNSDLLMLGQYKQENARLRELLGSPLRQDEQKMVTQ 122 Query: 125 ILYDARDPFTRKIILNRGSQQGVEAGQPVIDEVGIVGQVTRVFPFTSEVTLLTDKDQAIP 184 ++ DP++ ++++++GS GV GQPVI + G+VGQV V TS V L+ D A+P Sbjct: 123 VISTVNDPYSDQVVIDKGSVNGVYEGQPVISDKGVVGQVVAVAKLTSRVLLICDATHALP 182 Query: 185 VQVLRNGLRSVAYGRGQTGALDLRFMPANADIQKGDMLVTSGIDGIYPPGLAVASVALVE 244 +QVLRN +R +A G G T L L +PAN DI+ GD+LVTSG+ G +P G VA V+ V+ Sbjct: 183 IQVLRNDIRVIAAGNGCTDDLQLEHLPANTDIRVGDVLVTSGLGGRFPEGYPVAVVSSVK 242 Query: 245 TRSADSFARIVCRPLAG 261 + ++ I RP AG Sbjct: 243 LDTQRAYTVIQARPTAG 259 >mreC [M] COG1792 Cell shape-determining protein Eco Escherichia coli K12 Length = 367 Score = 163 bits (413), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 96/258 (37%), Positives = 159/258 (61%), Gaps = 2/258 (0%) Query: 5 PLFKQGASARVRVTVFALLSIVMLVVDARMHVLGTIRQALATALYPFQTVAMMPRDAATS 64 P+F +G S ++R+ + L+++ +++ D+R+ IR + TA+ PF V+ PR+ Sbjct: 3 PIFSRGPSLQIRLILAVLVALGIIIADSRLGTFSQIRTYMDTAVSPFYFVSNAPRELLDG 62 Query: 65 ITDSLVALNTLQKENRELRQQQIV-NAQLLQQERLLAAENAQLRKLLEMQQKVPVKSIVG 123 ++ +L + + L+ ENR LRQ+ ++ N++LL + ENA+LR+LL + + +V Sbjct: 63 VSQTLASRDQLELENRALRQELLLKNSELLMLGQY-KQENARLRELLGSPLRQDEQKMVT 121 Query: 124 EILYDARDPFTRKIILNRGSQQGVEAGQPVIDEVGIVGQVTRVFPFTSEVTLLTDKDQAI 183 +++ DP++ ++++++GS GV GQPVI + G+VGQV V TS V L+ D A+ Sbjct: 122 QVISTVNDPYSDQVVIDKGSVNGVYEGQPVISDKGVVGQVVAVAKLTSRVLLICDATHAL 181 Query: 184 PVQVLRNGLRSVAYGRGQTGALDLRFMPANADIQKGDMLVTSGIDGIYPPGLAVASVALV 243 P+QVLRN +R +A G G T L L +PAN DI+ GD+LVTSG+ G +P G VA V+ V Sbjct: 182 PIQVLRNDIRVIAAGNGCTDDLQLEHLPANTDIRVGDVLVTSGLGGRFPEGYPVAVVSSV 241 Query: 244 ETRSADSFARIVCRPLAG 261 + + ++ I RP AG Sbjct: 242 KLDTQRAYTVIQARPTAG 259 >ZmreC [M] COG1792 Cell shape-determining protein EcZ Escherichia coli O157:H7 EDL933 Length = 367 Score = 163 bits (412), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 96/260 (36%), Positives = 160/260 (61%), Gaps = 2/260 (0%) Query: 3 IPPLFKQGASARVRVTVFALLSIVMLVVDARMHVLGTIRQALATALYPFQTVAMMPRDAA 62 + P+F +G S ++R+ + L+++ +++ D+R+ IR + TA+ PF V+ PR+ Sbjct: 1 MKPIFSRGPSLQIRLILAVLVALGIIIADSRLGTFSQIRTYMDTAVSPFYFVSNAPRELL 60 Query: 63 TSITDSLVALNTLQKENRELRQQQIV-NAQLLQQERLLAAENAQLRKLLEMQQKVPVKSI 121 ++ +L + + L+ ENR LRQ+ ++ N++LL + ENA+LR+LL + + + Sbjct: 61 DGVSQTLASRDQLELENRALRQELLLKNSELLMLGQY-KQENARLRELLGSPLRQDEQKM 119 Query: 122 VGEILYDARDPFTRKIILNRGSQQGVEAGQPVIDEVGIVGQVTRVFPFTSEVTLLTDKDQ 181 V +++ DP++ ++++++GS GV GQPVI + G+VGQV V TS V L+ D Sbjct: 120 VTQVISTVNDPYSDQVVIDKGSVNGVYEGQPVISDKGVVGQVVAVAKLTSRVLLICDATH 179 Query: 182 AIPVQVLRNGLRSVAYGRGQTGALDLRFMPANADIQKGDMLVTSGIDGIYPPGLAVASVA 241 A+P+QVLRN +R +A G G T L L +PAN DI+ GD+LVTSG+ G +P G VA V+ Sbjct: 180 ALPIQVLRNDIRVIAAGNGCTDDLQLEHLPANTDIRVGDVLVTSGLGGRFPEGYPVAVVS 239 Query: 242 LVETRSADSFARIVCRPLAG 261 V+ + ++ I RP AG Sbjct: 240 SVKLDTQRAYTVIQARPTAG 259 >ECs4122 [M] COG1792 Cell shape-determining protein Ecs Escherichia coli O157:H7 Length = 367 Score = 163 bits (412), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 96/260 (36%), Positives = 160/260 (61%), Gaps = 2/260 (0%) Query: 3 IPPLFKQGASARVRVTVFALLSIVMLVVDARMHVLGTIRQALATALYPFQTVAMMPRDAA 62 + P+F +G S ++R+ + L+++ +++ D+R+ IR + TA+ PF V+ PR+ Sbjct: 1 MKPIFSRGPSLQIRLILAVLVALGIIIADSRLGTFSQIRTYMDTAVSPFYFVSNAPRELL 60 Query: 63 TSITDSLVALNTLQKENRELRQQQIV-NAQLLQQERLLAAENAQLRKLLEMQQKVPVKSI 121 ++ +L + + L+ ENR LRQ+ ++ N++LL + ENA+LR+LL + + + Sbjct: 61 DGVSQTLASRDQLELENRALRQELLLKNSELLMLGQY-KQENARLRELLGSPLRQDEQKM 119 Query: 122 VGEILYDARDPFTRKIILNRGSQQGVEAGQPVIDEVGIVGQVTRVFPFTSEVTLLTDKDQ 181 V +++ DP++ ++++++GS GV GQPVI + G+VGQV V TS V L+ D Sbjct: 120 VTQVISTVNDPYSDQVVIDKGSVNGVYEGQPVISDKGVVGQVVAVAKLTSRVLLICDATH 179 Query: 182 AIPVQVLRNGLRSVAYGRGQTGALDLRFMPANADIQKGDMLVTSGIDGIYPPGLAVASVA 241 A+P+QVLRN +R +A G G T L L +PAN DI+ GD+LVTSG+ G +P G VA V+ Sbjct: 180 ALPIQVLRNDIRVIAAGNGCTDDLQLEHLPANTDIRVGDVLVTSGLGGRFPEGYPVAVVS 239 Query: 242 LVETRSADSFARIVCRPLAG 261 V+ + ++ I RP AG Sbjct: 240 SVKLDTQRAYTVIQARPTAG 259 >VC0416 [M] COG1792 Cell shape-determining protein Vch Vibrio cholerae Length = 296 Score = 162 bits (410), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 96/270 (35%), Positives = 150/270 (55%) Query: 3 IPPLFKQGASARVRVTVFALLSIVMLVVDARMHVLGTIRQALATALYPFQTVAMMPRDAA 62 + P+F +G S ++R+ +LS +++ D+R+ +R L + + P Q A +PR Sbjct: 1 MKPIFGRGPSLQLRLFFAVMLSASLMLADSRLGAFSHVRFLLNSLVAPIQYAADLPRVLF 60 Query: 63 TSITDSLVALNTLQKENRELRQQQIVNAQLLQQERLLAAENAQLRKLLEMQQKVPVKSIV 122 DS+ + L++ N+ L+++ + L EN +LRKLL K +V Sbjct: 61 DDFYDSISSHQQLRENNQLLKREVLTLKSNLLLLEQYKEENQRLRKLLGSSFLRDEKKVV 120 Query: 123 GEILYDARDPFTRKIILNRGSQQGVEAGQPVIDEVGIVGQVTRVFPFTSEVTLLTDKDQA 182 E++ P+ ++++++G GV GQP+I+E GIVGQVT V S V LL D + A Sbjct: 121 TEVMAVDTSPYRHQVVIDKGRVDGVYEGQPIINEKGIVGQVTFVAAHNSRVLLLIDPNTA 180 Query: 183 IPVQVLRNGLRSVAYGRGQTGALDLRFMPANADIQKGDMLVTSGIDGIYPPGLAVASVAL 242 IPVQ +RN +R +A G GQT + L +P + DI+ GDMLVTSG+ G+YP G VA V+ Sbjct: 181 IPVQNIRNDIRVIASGNGQTDQIQLEHIPTSTDIEVGDMLVTSGLGGVYPEGYPVAIVSQ 240 Query: 243 VETRSADSFARIVCRPLAGIDRHRQLLILL 272 V+ + FA I P+ DR R LL++ Sbjct: 241 VDKDTRREFASIKADPVVEFDRLRYLLLIW 270