BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0313.p (217 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGl980GM [E] COG0765 ABC-type amino acid transport system, perme... 245 6e-65 AGc2581 [E] COG0765 ABC-type amino acid transport system, permea... 232 5e-61 SMa0081 [E] COG0765 ABC-type amino acid transport system, permea... 215 5e-56 AGc2569 [E] COG0765 ABC-type amino acid transport system, permea... 198 6e-51 RSc2105 [E] COG0765 ABC-type amino acid transport system, permea... 194 1e-49 AGpA330 [E] COG0765 ABC-type amino acid transport system, permea... 194 1e-49 AGl666 [E] COG0765 ABC-type amino acid transport system, permeas... 193 2e-49 YPO3255 [E] COG0765 ABC-type amino acid transport system, permea... 191 9e-49 mlr4899 [E] COG0765 ABC-type amino acid transport system, permea... 182 5e-46 SMa0503 [E] COG0765 ABC-type amino acid transport system, permea... 169 4e-42 >AGl980GM [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 219 Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 119/214 (55%), Positives = 163/214 (76%), Gaps = 1/214 (0%) Query: 5 FSWTYFFFMVQSIGWTLVLSALAFVLGGAGGFLVMLARISPHAWLRRPAILFIECVQGIP 64 F W F F++ ++ WT++L+ +A V GG GF + LAR S + LR A +I+ +QGIP Sbjct: 6 FGWNEFGFLLTALQWTVLLTIIALVGGGIVGFFIALARTSDNKLLRIAAGTYIQVIQGIP 65 Query: 65 LLILLFIVYFGLSVYGLVLPALVAAGLAMMIYTSAYLGDIWRGCVEAMPRPQWEASECLS 124 +L++LF+ Y+GLS+ GL LP L+AAG +M IYTS YL +IWRGC++A+P+ QWEASE L+ Sbjct: 66 VLMILFLSYYGLSLAGLELPPLIAAGASMTIYTSGYLAEIWRGCIQAVPKQQWEASESLA 125 Query: 125 LTRWQTLRLVIIPQATRLSLPPTIGFLVQLIKMTSLASVIGFVELTRAGQIINNSIFQPF 184 LTR Q R VI+PQA R+SLPPT+GF VQ++K TS+AS+IGFVEL RAGQ+INN+ FQPF Sbjct: 126 LTRAQQYRYVILPQAIRISLPPTVGFAVQVVKNTSIASIIGFVELARAGQLINNATFQPF 185 Query: 185 LVFLLVGSFYFLLCYPLSRWSASMERKLNV-SHR 217 VF+ V YF++CYPLS+ S +ER+L+ S+R Sbjct: 186 RVFVAVAVLYFIVCYPLSQLSRWLERRLHAGSNR 219 >AGc2581 [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 217 Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 108/216 (50%), Positives = 158/216 (73%) Query: 2 MGGFSWTYFFFMVQSIGWTLVLSALAFVLGGAGGFLVMLARISPHAWLRRPAILFIECVQ 61 M F W F F+++ GW++VL+A+AF +G G + R+S + +R A +I +Q Sbjct: 1 MSTFGWPEFLFLLRGAGWSIVLTAIAFSIGSLTGGFFAIMRLSQYGSVRNVAAGYITVIQ 60 Query: 62 GIPLLILLFIVYFGLSVYGLVLPALVAAGLAMMIYTSAYLGDIWRGCVEAMPRPQWEASE 121 IP+L++LF+ Y+GL+++G +P L+AA +++ +Y SAYL +IWRG ++A+P+PQWEAS Sbjct: 61 SIPVLMILFMSYYGLTLFGFEIPPLLAASVSLSVYVSAYLAEIWRGSIQAVPKPQWEASA 120 Query: 122 CLSLTRWQTLRLVIIPQATRLSLPPTIGFLVQLIKMTSLASVIGFVELTRAGQIINNSIF 181 L+LTR+Q R VI+PQA RLSLPPT+GFLVQL+K TS+ SV+GFVEL+RAGQ++NN+ F Sbjct: 121 SLALTRFQQYRYVILPQALRLSLPPTVGFLVQLVKNTSIVSVVGFVELSRAGQLVNNATF 180 Query: 182 QPFLVFLLVGSFYFLLCYPLSRWSASMERKLNVSHR 217 +PF VF +V YF +C+PLSR S +ER L+V Sbjct: 181 RPFQVFFVVALLYFAICFPLSRLSRHLERVLHVGRN 216 >SMa0081 [E] COG0765 ABC-type amino acid transport system, permease component Sme Sinorhizobium meliloti Length = 218 Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 108/213 (50%), Positives = 149/213 (69%) Query: 1 MMGGFSWTYFFFMVQSIGWTLVLSALAFVLGGAGGFLVMLARISPHAWLRRPAILFIECV 60 M+ F W F +V + WT+ LSA+AF G GG LV L R+S LR A FI Sbjct: 1 MIRAFGWNEFLVIVAAAQWTIALSAIAFAGGSVGGLLVALMRVSETRALRLFATGFIRVF 60 Query: 61 QGIPLLILLFIVYFGLSVYGLVLPALVAAGLAMMIYTSAYLGDIWRGCVEAMPRPQWEAS 120 QG PLL+ LF+V+FG++++G + +AA +A+ ++ SA+LG+IWRGC+EA+P+ Q EA+ Sbjct: 61 QGTPLLMQLFLVFFGMNIFGFAINPWIAATIALALHASAFLGEIWRGCIEAVPKGQREAA 120 Query: 121 ECLSLTRWQTLRLVIIPQATRLSLPPTIGFLVQLIKMTSLASVIGFVELTRAGQIINNSI 180 L L ++++R VI+PQA R+++ PT+GFLVQLIK TSLAS+IGF ELTR GQIINN+ Sbjct: 121 TALGLRYFRSMRHVILPQAARIAVAPTVGFLVQLIKGTSLASIIGFTELTRQGQIINNAT 180 Query: 181 FQPFLVFLLVGSFYFLLCYPLSRWSASMERKLN 213 F PFLVF V + YFLLC+PLS + ME + + Sbjct: 181 FSPFLVFGTVAAVYFLLCWPLSLIARRMETRFS 213 >AGc2569 [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 219 Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 100/212 (47%), Positives = 151/212 (71%) Query: 6 SWTYFFFMVQSIGWTLVLSALAFVLGGAGGFLVMLARISPHAWLRRPAILFIECVQGIPL 65 +W ++ + WT++LS ++F GG L++ RIS +R A ++E QG PL Sbjct: 6 TWDILRNLLLATRWTVLLSLVSFAGGGLVALLLLFMRISRKKSMRVFARYYVELFQGTPL 65 Query: 66 LILLFIVYFGLSVYGLVLPALVAAGLAMMIYTSAYLGDIWRGCVEAMPRPQWEASECLSL 125 L+ LFI +FGL + G+ +PA +AAGL ++++ +A+L +IWRGCVE++ + QWEAS L++ Sbjct: 66 LMQLFIAFFGLGLVGIDVPAWLAAGLTLILWAAAFLTEIWRGCVESVAKGQWEASASLAM 125 Query: 126 TRWQTLRLVIIPQATRLSLPPTIGFLVQLIKMTSLASVIGFVELTRAGQIINNSIFQPFL 185 R Q +R VI+PQA R+++PPT+GF VQ+IK T++ S+IGFVEL++AG ++ N+ FQPF Sbjct: 126 GRLQQMRYVILPQAMRVAIPPTVGFFVQVIKGTAVTSIIGFVELSKAGTVVTNATFQPFT 185 Query: 186 VFLLVGSFYFLLCYPLSRWSASMERKLNVSHR 217 V+ LV YF LC+PLS+ S +ERKLNV+HR Sbjct: 186 VYGLVALIYFALCWPLSKSSQILERKLNVAHR 217 >RSc2105 [E] COG0765 ABC-type amino acid transport system, permease component Rso Ralstonia solanacearum Length = 217 Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 90/187 (48%), Positives = 137/187 (73%) Query: 26 LAFVLGGAGGFLVMLARISPHAWLRRPAILFIECVQGIPLLILLFIVYFGLSVYGLVLPA 85 +AF LGGA G V+ AR+ +A L+R + ++I+ Q PLL+ +F+V+FG S+ GL + Sbjct: 27 MAFALGGAAGLAVLFARVGRNAGLQRVSQVYIQIFQNTPLLMQMFLVFFGASMAGLEMSP 86 Query: 86 LVAAGLAMMIYTSAYLGDIWRGCVEAMPRPQWEASECLSLTRWQTLRLVIIPQATRLSLP 145 AA + + +YTSAYL ++WRGCVEA+PR QWEAS L++ +Q +R V++PQA R+S+ Sbjct: 87 WTAAAIGLTLYTSAYLAEVWRGCVEAIPRGQWEASASLAMGYFQQMRHVVLPQAVRMSIA 146 Query: 146 PTIGFLVQLIKMTSLASVIGFVELTRAGQIINNSIFQPFLVFLLVGSFYFLLCYPLSRWS 205 PT+GF VQ++K T++AS+IGF +LT+ G ++ N+ FQPFL++ LVG Y LC+PLS + Sbjct: 147 PTVGFSVQIVKGTAVASIIGFEDLTKLGSVLANATFQPFLIYGLVGMAYLALCWPLSLCA 206 Query: 206 ASMERKL 212 + +E+KL Sbjct: 207 SHLEKKL 213 >AGpA330 [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 216 Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 103/213 (48%), Positives = 141/213 (66%), Gaps = 1/213 (0%) Query: 2 MGGFSWTYFFFMVQSIGWTLVLSALAFVLGGAGGFLVMLARISPHAWLRRPAILFIECVQ 61 M FS++ F+ ++ WT +++A+A G G + +AR S LR A F+E +Q Sbjct: 1 MRQFSFSDLLFLATALEWTFLMAAIALAFGVPLGLALAIARTSGSTVLRVIASAFVELIQ 60 Query: 62 GIPLLILLFIVYFGLSVY-GLVLPALVAAGLAMMIYTSAYLGDIWRGCVEAMPRPQWEAS 120 GIPLL LL YFG+ V G +P +VA G A IYT+ +LGDIWRG ++A+ + QWEA Sbjct: 61 GIPLLGLLMFFYFGIPVLAGKDVPTVVAVGAAYTIYTAVFLGDIWRGGIQAVRQAQWEAG 120 Query: 121 ECLSLTRWQTLRLVIIPQATRLSLPPTIGFLVQLIKMTSLASVIGFVELTRAGQIINNSI 180 CL L+ Q +I PQA R++LP T+GFLVQLIK TSLASV+G VEL RAGQ+I+ Sbjct: 121 ACLGLSWLQQFVHIIGPQAFRIALPATVGFLVQLIKNTSLASVVGLVELARAGQMISAGT 180 Query: 181 FQPFLVFLLVGSFYFLLCYPLSRWSASMERKLN 213 FQP LV+ LV + YF +C+PL+ WS ++E +LN Sbjct: 181 FQPLLVYTLVAAIYFTICFPLTTWSRTLEARLN 213 >AGl666 [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 216 Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 98/207 (47%), Positives = 148/207 (71%) Query: 11 FFMVQSIGWTLVLSALAFVLGGAGGFLVMLARISPHAWLRRPAILFIECVQGIPLLILLF 70 FF++Q + WTL L+ + F+ GG G V LAR++ ++R ++ FI QG PLL+ LF Sbjct: 10 FFLMQGLKWTLALTLIGFIGGGVFGLCVALARVADSPAIQRASMAFIAVFQGTPLLMQLF 69 Query: 71 IVYFGLSVYGLVLPALVAAGLAMMIYTSAYLGDIWRGCVEAMPRPQWEASECLSLTRWQT 130 +VY+G+++ GL + A +A +A ++ SA+LG+IWRG ++A+P+ Q EA+ L L Sbjct: 70 VVYYGVALAGLNVDAWIAVAIAFTLHASAFLGEIWRGGIQAVPKGQTEAANALGLHYVSR 129 Query: 131 LRLVIIPQATRLSLPPTIGFLVQLIKMTSLASVIGFVELTRAGQIINNSIFQPFLVFLLV 190 ++ V++PQA ++SLP TIGFLVQLIK TSLA+++GFVEL+RAGQI++N F+P VF +V Sbjct: 130 MKDVVLPQAFKISLPATIGFLVQLIKGTSLAAIVGFVELSRAGQIVSNQTFRPLTVFAIV 189 Query: 191 GSFYFLLCYPLSRWSASMERKLNVSHR 217 G YFL+C+PLS W A +E++L + R Sbjct: 190 GIIYFLICWPLSLWGAGVEKRLQAASR 216 >YPO3255 [E] COG0765 ABC-type amino acid transport system, permease component Ype Yersinia pestis Length = 217 Score = 191 bits (486), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 100/200 (50%), Positives = 138/200 (69%), Gaps = 1/200 (0%) Query: 19 WTLVLSALAFVLGGAGGFLVMLARISPHAWLRRPAILFIECVQGIPLLILLFIVYFGLSV 78 WTL+LS AF G +ML R+S W R L+ E QG PLL+ LF+ +FGL++ Sbjct: 18 WTLLLSLTAFFGGTLVTLPLMLMRLSHWRWAARVVRLYTELFQGTPLLMQLFLAFFGLAL 77 Query: 79 YGLVLPALVAAGLAMMIYTSAYLGDIWRGCVEAMPRPQWEASECLSLTRWQTLRLVIIPQ 138 +G+ + AA +A+ ++TSA+L DIW G + A+P+ QWEAS CL L+ QTL VI PQ Sbjct: 78 FGIDVSPWTAAAMALTLFTSAFLVDIWCGSIAALPKGQWEASRCLGLSFHQTLFRVIAPQ 137 Query: 139 ATRLSLPPTIGFLVQLIKMTSLASVIGFVELTRAGQIINNSIFQPFLVFLLVGSFYFLLC 198 A R+++ PT+GF VQ+IK T+LAS+IGFVELT+AG ++NN +QPF VF LV YFL+C Sbjct: 138 AMRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTYQPFKVFGLVALGYFLMC 197 Query: 199 YPLSRWSASMERKLN-VSHR 217 YPLSR+S +E+K + + H Sbjct: 198 YPLSRYSHYLEKKFHAIDHH 217 >mlr4899 [E] COG0765 ABC-type amino acid transport system, permease component Mlo Mesorhizobium loti Length = 215 Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 93/193 (48%), Positives = 129/193 (66%) Query: 19 WTLVLSALAFVLGGAGGFLVMLARISPHAWLRRPAILFIECVQGIPLLILLFIVYFGLSV 78 WT++LS AFV G G V+ RIS H W RR A +I QG PLL+ LF+++FGL + Sbjct: 19 WTVLLSLAAFVGGALVGMAVLFFRISKHKWSRRLASGYIALFQGTPLLMQLFLMFFGLPM 78 Query: 79 YGLVLPALVAAGLAMMIYTSAYLGDIWRGCVEAMPRPQWEASECLSLTRWQTLRLVIIPQ 138 GL + AA L + + SAYL +IWR V+A+PR QW+A L L Q LRL+I+PQ Sbjct: 79 LGLRIEPWTAAVLGLTFFASAYLAEIWRSGVDALPRGQWDAGASLGLHYLQELRLIILPQ 138 Query: 139 ATRLSLPPTIGFLVQLIKMTSLASVIGFVELTRAGQIINNSIFQPFLVFLLVGSFYFLLC 198 A ++ PT+GFLVQLIK T+L S+IGF EL R INN+ F+PF V+ LV +FL+C Sbjct: 139 AFSITRAPTVGFLVQLIKSTALTSIIGFEELVRTSNAINNATFEPFKVYGLVALIFFLMC 198 Query: 199 YPLSRWSASMERK 211 +PL++++ S+E++ Sbjct: 199 FPLTQYARSLEKR 211 >SMa0503 [E] COG0765 ABC-type amino acid transport system, permease component Sme Sinorhizobium meliloti Length = 218 Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 98/210 (46%), Positives = 148/210 (70%) Query: 2 MGGFSWTYFFFMVQSIGWTLVLSALAFVLGGAGGFLVMLARISPHAWLRRPAILFIECVQ 61 M F F F+V ++ WTL L+ LAFV GG G ++ L RI+ +++ +Q Sbjct: 1 MRTFGSPEFLFIVYALRWTLTLTVLAFVGGGIMGIVLALLRIARIRAFSAITTFYMQVIQ 60 Query: 62 GIPLLILLFIVYFGLSVYGLVLPALVAAGLAMMIYTSAYLGDIWRGCVEAMPRPQWEASE 121 G+PLL+LLF+ Y+ S++G+ + AL AA +A+ I +SA+LG IW + A+P+ QWE+++ Sbjct: 61 GLPLLVLLFLCYYAPSLFGIEIAALTAAAIALTINSSAFLGAIWESALRAIPKAQWESAD 120 Query: 122 CLSLTRWQTLRLVIIPQATRLSLPPTIGFLVQLIKMTSLASVIGFVELTRAGQIINNSIF 181 L+LT ++TLR VI PQA RL+LP T+GFLVQ+IK TSLAS+IGF+E+TRAGQ+++N+ F Sbjct: 121 ALALTPYKTLRFVIAPQAIRLALPSTVGFLVQIIKQTSLASIIGFIEITRAGQLVSNATF 180 Query: 182 QPFLVFLLVGSFYFLLCYPLSRWSASMERK 211 +P FL V + YF +C+PL++ S +ER+ Sbjct: 181 EPLKAFLSVAALYFAVCFPLTQLSLWLERR 210